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Gene: Trmo (tRNA methyltransferase O) Rattus norvegicus
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Symbol: Trmo
Name: tRNA methyltransferase O
Description: Predicted to have tRNA (adenine-N6-)-methyltransferase activity. Predicted to be involved in tRNA methylation. Orthologous to human TRMO (tRNA methyltransferase O); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; indole-3-methanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC298072; MGC116115; Nap1; nef-associated protein 1; RGD1305420; similar to Nef associated protein 1; thioesterase NAP1; tRNA (adenine(37)-N6)-methyltransferase
Orthologs:
Homo sapiens (human) : TRMO (tRNA methyltransferase O)  HGNC  Alliance
Mus musculus (house mouse) : Trmo (tRNA methyltransferase O)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trmo (tRNA methyltransferase O)
Pan paniscus (bonobo/pygmy chimpanzee) : TRMO (tRNA methyltransferase O)
Canis lupus familiaris (dog) : TRMO (tRNA methyltransferase O)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trmo (tRNA methyltransferase O)
Sus scrofa (pig) : TRMO (tRNA methyltransferase O)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0561,992,507 - 62,001,065 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl561,990,328 - 62,001,196 (-)Ensembl
Rnor_5.0566,505,321 - 66,513,879 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4562,943,064 - 62,951,845 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1562,943,242 - 62,952,024 (-)NCBI
Celera559,227,264 - 59,235,827 (-)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trmo
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305420
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.