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Gene: Nipa1 (NIPA magnesium transporter 1) Rattus norvegicus
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Symbol: Nipa1
Name: NIPA magnesium transporter 1
Description: Predicted to be involved in magnesium ion transport. Predicted to localize to the early endosome and plasma membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 6. Orthologous to human NIPA1 (NIPA magnesium transporter 1); INTERACTS WITH 17alpha-ethynylestradiol; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC308668; magnesium transporter NIPA1; non imprinted in Prader-Willi/Angelman syndrome 1; non imprinted in Prader-Willi/Angelman syndrome 1 homolog; non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human); SLC56A1; solute carrier family 56 member 1; spastic paraplegia 6 (autosomal dominant); Spg6
Orthologs:
Homo sapiens (human) : NIPA1 (NIPA magnesium transporter 1)  HGNC  Alliance
Mus musculus (house mouse) : Nipa1 (non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nipa1 (NIPA magnesium transporter 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NIPA1 (NIPA magnesium transporter 1)
Canis lupus familiaris (dog) : NIPA1 (NIPA magnesium transporter 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nipa1 (NIPA magnesium transporter 1)
Sus scrofa (pig) : NIPA1 (NIPA magnesium transporter 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01114,385,484 - 114,422,741 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01115,392,570 - 115,410,234 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41107,373,113 - 107,390,777 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11107,452,013 - 107,480,546 (-)NCBI
Celera1101,049,294 - 101,085,273 (-)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nipa1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305401
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.