Arid3a (AT-rich interaction domain 3A)

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Gene: Arid3a (AT-rich interaction domain 3A) Rattus norvegicus

Analyze

Symbol:

Arid3a

Name:

AT-rich interaction domain 3A

RGD ID:

1305299

Description:

Predicted to enable several functions, including chromatin binding activity; identical protein binding activity; and transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within DNA-templated transcription and positive regulation of transcription by RNA polymerase II. Predicted to be located in cytosol; membrane raft; and nucleoplasm. Predicted to be active in nucleus. Orthologous to human ARID3A (AT-rich interaction domain 3A); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

AT rich interactive domain 3A (Bright like); AT-rich interactive domain-containing protein 3A; dead ringer homolog 1; LOC314616; MGC189073

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ARID3A (AT-rich interaction domain 3A)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Arid3a (AT rich interactive domain 3A (BRIGHT-like))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Arid3a (AT-rich interaction domain 3A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ARID3A (AT-rich interaction domain 3A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ARID3A (AT-rich interaction domain 3A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Arid3a (AT-rich interaction domain 3A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ARID3A (AT-rich interaction domain 3A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ARID3A (AT-rich interaction domain 3A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Arid3a (AT-rich interaction domain 3A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ARID3A (AT-rich interaction domain 3A)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Mus musculus (house mouse):	Arid3a (AT rich interactive domain 3A (BRIGHT-like))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	arid3a (AT rich interactive domain 3A (BRIGHT-like))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	cfi-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	retn	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	9,755,291 - 9,781,260 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	9,755,294 - 9,780,599 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	12,637,502 - 12,659,280 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	7	14,512,824 - 14,534,596 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	7	12,373,998 - 12,395,761 (-)	NCBI	Rnor_WKY
Rnor_6.0	7	12,573,604 - 12,602,407 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	12,574,198 - 12,601,674 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	12,745,711 - 12,771,710 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	11,269,055 - 11,290,551 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	11,269,305 - 11,293,860 (-)	NCBI
Celera	7	7,930,752 - 7,952,277 (-)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cerebral creatine deficiency syndrome (ISO)

cyclic hematopoiesis (ISO)

genetic disease (ISO)

hepatocellular carcinoma (ISO)

Peutz-Jeghers syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dibromoethane (ISO)

1,2-dichloroethane (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-methylcholine (ISO)

2-nitrotoluene (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP)

caffeine (ISO)

carbon nanotube (ISO)

choline (ISO)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

Cuprizon (EXP)

decabromodiphenyl ether (EXP)

dicrotophos (ISO)

dioxygen (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

emodin (ISO)

endosulfan (EXP)

folic acid (ISO)

glycidol (ISO)

hydrazine (ISO)

hydrogen peroxide (ISO)

L-methionine (ISO)

manganese(II) chloride (EXP)

menadione (ISO)

methapyrilene (ISO)

methimazole (EXP)

methyl carbamate (ISO)

methylmercury chloride (ISO)

N-Nitrosopyrrolidine (ISO)

paracetamol (EXP,ISO)

phenylmercury acetate (ISO)

potassium chloride (ISO)

quinolin-8-ol (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

sunitinib (ISO)

tert-butyl hydroperoxide (ISO)

titanium dioxide (ISO)

tungsten (ISO)

valproic acid (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of transcription by RNA polymerase II (ISO)

regulation of DNA-templated transcription (ISO)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

cytosol (IEA)

cytosol (ISO)

membrane raft (ISO)

nucleoplasm (IEA,ISO)

nucleus (IBA,ISO)

Molecular Function

chromatin binding (ISO)

DNA binding (IBA,ISO)

identical protein binding (ISO)

protein binding (ISO)

transcription coregulator activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15456761	PMID:21955986

Genomics

Comparative Map Data

Arid3a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	9,755,291 - 9,781,260 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	9,755,294 - 9,780,599 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	12,637,502 - 12,659,280 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	7	14,512,824 - 14,534,596 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	7	12,373,998 - 12,395,761 (-)	NCBI	Rnor_WKY
Rnor_6.0	7	12,573,604 - 12,602,407 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	12,574,198 - 12,601,674 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	12,745,711 - 12,771,710 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	11,269,055 - 11,290,551 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	11,269,305 - 11,293,860 (-)	NCBI
Celera	7	7,930,752 - 7,952,277 (-)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

ARID3A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	925,732 - 975,939 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	19	925,781 - 975,939 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	926,035 - 975,939 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	877,037 - 923,816 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	880,328 - 923,801	NCBI
Celera	19	858,387 - 905,149 (+)	NCBI		Celera
Cytogenetic Map	19	p13.3	NCBI
HuRef	19	699,675 - 746,206 (+)	NCBI		HuRef
CHM1_1	19	925,610 - 972,376 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	888,770 - 938,643 (+)	NCBI		T2T-CHM13v2.0

Arid3a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	79,762,877 - 79,790,852 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	79,762,877 - 79,790,852 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	79,927,043 - 79,955,018 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	79,927,043 - 79,955,018 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	79,389,817 - 79,417,757 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	79,330,201 - 79,358,141 (+)	NCBI		MGSCv36	mm8
Celera	10	80,941,882 - 80,969,819 (+)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI

Arid3a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	6,884,598 - 6,908,574 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955495	6,884,077 - 6,912,625 (-)	NCBI	ChiLan1.0	ChiLan1.0

ARID3A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	904,414 - 948,493 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
Mhudiblu_PPA_v0	19	157,094 - 207,676 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

ARID3A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	57,724,747 - 57,746,637 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	57,722,917 - 57,746,622 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	57,526,366 - 57,548,245 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	58,464,582 - 58,488,486 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	58,467,102 - 58,488,703 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	57,519,351 - 57,543,374 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	58,001,151 - 58,023,054 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	58,201,962 - 58,226,018 (-)	NCBI		UU_Cfam_GSD_1.0

Arid3a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	217,416,306 - 217,440,038 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936588	394,469 - 415,893 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936588	389,213 - 418,360 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARID3A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	77,431,087 - 77,464,628 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	77,428,618 - 77,464,916 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	77,532,702 - 77,569,032 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ARID3A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	667,426 - 727,987 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	680,965 - 727,843 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666081	8,192,284 - 8,255,148 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Arid3a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624828	7,635,383 - 7,666,416 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624828	7,636,211 - 7,666,868 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Arid3a
123 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	92
Count of miRNA genes:	73
Interacting mature miRNAs:	79
Transcripts:	ENSRNOT00000026708
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2298550	Neuinf6	Neuroinflammation QTL 6	3.3		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	7	1	27829089	Rat
7411566	Bw136	Body weight QTL 136	10.4	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	1	31962314	Rat
9590142	Scort5	Serum corticosterone level QTL 5	24.4	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	1	31962314	Rat
724560	Plsm3	Polydactyly-luxate syndrome (PLS) morphotypes QTL 3		0.0003	tibia length (VT:0004357)	tibia length (CMO:0000450)	7	1	34000259	Rat
2317047	Wbc4	White blood cell count QTL 4		0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	7	1	35342956	Rat
61410	Bw19	Body weight QTL 19	6.2	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	44782185	Rat
631503	Bp102	Blood pressure QTL 102	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	1	44822433	Rat
1300176	Hrtrt10	Heart rate QTL 10	3.19		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	7	664270	26029351	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
10755438	Coatc9	Coat color QTL 9		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	3529280	48529280	Rat
9590102	Sffal5	Serum free fatty acids level QTL 5	8.62	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	7	5329019	50329019	Rat
10755440	Coatc10	Coat color QTL 10		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	7496499	52496499	Rat
10059592	Kidm45	Kidney mass QTL 45	3.95	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	7573985	52573985	Rat
2298547	Neuinf5	Neuroinflammation QTL 5	3.7		nervous system integrity trait (VT:0010566)	spinal cord Cd74 protein level (CMO:0002131)	7	9462246	58265113	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	9462246	98011544	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	1	12	20	20	8	20			22	22	34	4
Low	2	31	36	20	11	20	8	11	52	13	7	7	8
Below cutoff			1	1		1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240902	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594812	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000026708 ⟹ ENSRNOP00000026708

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	9,755,294 - 9,777,295 (-)	Ensembl
Rnor_6.0 Ensembl	7	12,576,365 - 12,598,370 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000089009 ⟹ ENSRNOP00000073120

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	7	12,574,198 - 12,598,183 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000093168

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	7	12,579,988 - 12,583,118 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000093489 ⟹ ENSRNOP00000076345

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	9,776,565 - 9,780,599 (-)	Ensembl
Rnor_6.0 Ensembl	7	12,597,640 - 12,601,674 (-)	Ensembl

RefSeq Acc Id:

NM_001108066 ⟹ NP_001101536

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	9,755,291 - 9,777,295 (-)	NCBI
Rnor_6.0	7	12,576,370 - 12,598,370 (-)	NCBI
Rnor_5.0	7	12,745,711 - 12,771,710 (-)	NCBI
RGSC_v3.4	7	11,269,055 - 11,290,551 (-)	RGD
Celera	7	7,930,752 - 7,952,277 (-)	RGD

Sequence:

show sequence

CAGAGATTCCCTTGGTGTCCACTGCAGTGACCCTGGTCCTGAGGAACCTGCAGACAGGCAGATG
AGGGAGTCTGCAGGTGCTTGAATGAGCCCGACACCAGCCTCTGCCCCTGGGTGCCCGACGTAAC
AACAAGGATCCCACTGGTCGCCCCTGGCATGCCCCACCAGCCTTCACCCTGAGTTGGCAGCCCC
CACCCCTGCCAGCCGTCACCCTGCATTGTTCCGGCTCCCCCGAAGTCCCCACGCTGCAGTGCGG
CCAAGACCCCTCCCCACGGGGGCCACCCCCACCAAGTGCCCCTGGTGCCCGGGGTGGCCCGGCC
CGTCGGGCCATGAAGCTGCAGGCAGTGATGGAGACTCTTATTCAGAGGCAACAGCGAGCCCGGC
AGGAACTGGAGGCTCGACAGCCTCCACTACCCCCACCACCGGAGCCCGCTGGTGTCCAGGCTCG
GACCACCATGACAGATGAGGACAGGGAGCCTGAGAATGCCCGTATGCATAGGACGCAGATGGCT
GCACTGGCTGCCATGCGGGCTGCTGCCGCCGGCTTGAGACATCCGTCCTCTCCCGGGGGCTCGG
AGGACGAAGACACAGCCCAGGGAGGGACTCTGAGTTCACCTGCCCTGCATGGAAGTGGCCAGGA
GGGACCGGGACACACTGAGGGAGACGGCCATTTGATGGACATGGGCTCCGATGATGACACGAAG
CCCAAGTGGGAAGAACAAGAGCTGGAAGAACTGGGGGAAGAGGAAGAGGAGGAGGATGAAGATG
ACTTTGAGGAAGAAGAGGAGGATGAGGAGGAAGAAGGCCTGGGCCTCCCAGAGTCTGCCAGCCT
GGGCTCCGCAGGCCTGTTTACCCGCAAGGCCCCACCTACTCAGACCTTCCGTGGAGACGGTGGT
CCCAGAATGCTCAGTGGCCCTGAGCGCCTGGGACCTGGCCCGGCCCACCCCAGTCATGTGGCGT
CCCAGATGCCACCACCGGACCATGGGGACTGGACATTTGAGGAGCAGTTCAAACAGCTCTATGA
ACTGGACGCAGACCCCAAGAGGAAAGAGTTCCTGGACGACCTGTTCAGCTTCATGCAGAAGCGG
GGCACTCCGGTGAACCGGATCCCCATCATGGCCAAGCAGGTCCTCGACCTGTTCATGCTGTATG
TGCTGGTGACGGAAAAGGGCGGTCTGGTAGAGGTTATCAACAAGAAGCTGTGGAGGGAGATCAC
CAAGGGGCTCAACCTGCCCACCTCCATCACCAGTGCTGCCTTCACACTTCGGACACAGTACATG
AAGTATCTTTACCCCTATGAGTGTGAGAGGCGAGGCCTGAGCAGCCCCAATGAGCTCCAGGCTG
CCATAGACAGCAACCGCCGGGAGGGCAGGCGCCAGAGCTTCGGGGGCTCCCTCTTTGCTTACTC
ACCCAGTGGAGCCCACAGCATGCTGTCCTCACCCAAGCTACCGGTGACTTCTTTGGGCCTTGCT
GCCAGCACCAATGGCAGCTCTATCACCCCAACACCCAAGATCAAGAAAGAGGAAGACTCAGCCA
TCCCCATCACAGTCCCAGGCCGCCTACCCGTGTCTCTGGCAGGCCACCCTGTCGTAGCAGCCCA
GGCAGCGGCTGTGCAAGCCGCAGCAGCCCAGGCTGCAGTTGCGGCCCAGGCAGCCGCCCTGGAA
CAACTCCGGGAGAAGCTGGAATCCACGGAGCCTCCGGAAAAGAAGATGGCCCTGGTTGCAGATG
AGCAGCAGCGTCTCATGCAGCGAGCCGTGCAGCAGAGCTTCCTGGCCATGACAGCCCAGCTGCC
CATGAACATCCGGATCAACAGCCAAGCCTCTGAGAGTCGCCAGGACCCAGCTGTAAATCTCACC
AGTGCCAATGGCAGCAACAGTATTAGCATGTCCGTGGAGATGAACGGTATTGTATACACAGGGG
TGCTGTTCGCTCAGCCACCACCTCCTACGCCACCTCCCGCCTCCAGCAAAGGTGGTGTGAGCAG
CATTGGTACCAACAACACCATGGGTAACCGGACAGGAGCCAGTGGCAGTGCTGGCAGCAGCGGC
CAAGTGGGGCTGGCTGGGGTGTCTGCACCCACCATGTCTTCTACCTCAAATAACTCCTTGCCTT
AAAAGGAAACCAAGTTGCATGGCTGCCCACCCGCCACAGGAACCACATGGCCACACAGGGGGAC
CTGGGACGTCAGAAGAATCCCAGTGGGCTGGGCAGATTCCCAAGGAGCCACACTGACGCCAAAA
AGGAGAGAGAGAGATAGAGAGAGAAAGAGAGAGAGAGAAAATATATATATATACATATATATAT
ATACATATAGAAAGAGATAGGTAGATGGAGAAACAGATCTAATAAATCAGGGCAAAGCAAAAAA
AAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006240902 ⟹ XP_006240964

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	9,755,542 - 9,777,525 (-)	NCBI
Rnor_6.0	7	12,573,604 - 12,598,667 (-)	NCBI
Rnor_5.0	7	12,745,711 - 12,771,710 (-)	NCBI

Sequence:

show sequence

ACTTATACCACACTGGTGGCACGCCAAGGCCCAGAGGCCCACCGAGGTATATCTGAGAAAGCAA
ATTGTGATTGGTCTCCTAGACAGCGACTATAATCTTGGCCAGGGTTTCCAGGGCCTCTCCGGGC
TAAGCAACATCTAGAACTTAGAGCCAGAATCCAGAACCCAGAGGGACTCTGAGGTCTAGAAGGG
GGGTACAACCAATAAGGAAGAAGGAACACCAGGCCCCTCCCCCACGACTCTTCTTATGGGACAA
TAACCCCATGGTGTCTCTGGTGGACCTGCCCAGAGGGGACCCAGAGATTCCCTTGGTGTCCACT
GCAGTGACCCTGGTCCTGAGGAACCTGCAGACAGGCAGATGAGGGTATGAACCCCTGAGCAGGA
GTCTGCAGGTGCTTGAATGAGCCCGACACCAGCCTCTGCCCCTGGGTGCCCGACGTAACAACAA
GGATCCCACTGGTCGCCCCTGGCATGCCCCACCAGCCTTCACCCTGAGTTGGCAGCCCCCACCC
CTGCCAGCCGTCACCCTGCATTGTTCCGGCTCCCCCGAAGTCCCCACGCTGCAGTGCGGCCAAG
ACCCCTCCCCACGGGGGCCACCCCCACCAAGTGCCCCTGGTGCCCGGGGTGGCCCGGCCCGTCG
GGCCATGAAGCTGCAGGCAGTGATGGAGACTCTTATTCAGAGGCAACAGCGAGCCCGGCAGGAA
CTGGAGGCTCGACAGCCTCCACTACCCCCACCACCGGAGCCCGCTGGTGTCCAGGCTCGGACCA
CCATGACAGATGAGGACAGGGAGCCTGAGAATGCCCGTATGCATAGGACGCAGATGGCTGCACT
GGCTGCCATGCGGGCTGCTGCCGCCGGCTTGAGACATCCGTCCTCTCCCGGGGGCTCGGAGGAC
GAAGACACAGCCCAGGGAGGGACTCTGAGTTCACCTGCCCTGCATGGAAGTGGCCAGGAGGGAC
CGGGACACACTGAGGGAGACGGCCATTTGATGGACATGGGCTCCGATGATGACACGAAGCCCAA
GTGGGAAGAACAAGAGCTGGAAGAACTGGGGGAAGAGGAAGAGGAGGAGGATGAAGATGACTTT
GAGGAAGAAGAGGAGGATGAGGAGGAAGAAGGCCTGGGCCTCCCAGAGTCTGCCAGCCTGGGCT
CCGCAGGCCTGTTTACCCGCAAGGCCCCACCTACTCAGACCTTCCGTGGAGACGGTGGTCCCAG
AATGCTCAGTGGCCCTGAGCGCCTGGGACCTGGCCCGGCCCACCCCAGTCATGTGGCGTCCCAG
ATGCCACCACCGGACCATGGGGACTGGACATTTGAGGAGCAGTTCAAACAGCTCTATGAACTGG
ACGCAGACCCCAAGAGGAAAGAGTTCCTGGACGACCTGTTCAGCTTCATGCAGAAGCGGGGCAC
TCCGGTGAACCGGATCCCCATCATGGCCAAGCAGGTCCTCGACCTGTTCATGCTGTATGTGCTG
GTGACGGAAAAGGGCGGTCTGGTAGAGGTTATCAACAAGAAGCTGTGGAGGGAGATCACCAAGG
GGCTCAACCTGCCCACCTCCATCACCAGTGCTGCCTTCACACTTCGGACACAGTACATGAAGTA
TCTTTACCCCTATGAGTGTGAGAGGCGAGGCCTGAGCAGCCCCAATGAGCTCCAGGCTGCCATA
GACAGCAACCGCCGGGAGGGCAGGCGCCAGAGCTTCGGGGGCTCCCTCTTTGCTTACTCACCCA
GTGGAGCCCACAGCATGCTGTCCTCACCCAAGCTACCGGTGACTTCTTTGGGCCTTGCTGCCAG
CACCAATGGCAGCTCTATCACCCCAACACCCAAGATCAAGAAAGAGGAAGACTCAGCCATCCCC
ATCACAGTCCCAGGCCGCCTACCCGTGTCTCTGGCAGGCCACCCTGTCGTAGCAGCCCAGGCAG
CGGCTGTGCAAGCCGCAGCAGCCCAGGCTGCAGTTGCGGCCCAGGCAGCCGCCCTGGAACAACT
CCGGGAGAAGCTGGAATCCACGGAGCCTCCGGAAAAGAAGATGGCCCTGGTTGCAGATGAGCAG
CAGCGTCTCATGCAGCGAGCCGTGCAGCAGAGCTTCCTGGCCATGACAGCCCAGCTGCCCATGA
ACATCCGGATCAACAGCCAAGCCTCTGAGAGTCGCCAGGACCCAGCTGTAAATCTCACCAGTGC
CAATGGCAGCAACAGTATTAGCATGTCCGTGGAGATGAACGGTATTGTATACACAGGGGTGCTG
TTCGCTCAGCCACCACCTCCTACGCCACCTCCCGCCTCCAGCAAAGGTGGTGTGAGCAGCATTG
GTACCAACAACACCATGGGTAACCGGACAGGAGCCAGTGGCAGTGCTGGCAGCAGCGGCCAAGT
GGGGCTGGCTGGGGTGTCTGCACCCACCATGTCTTCTACCTCAAATAACTCCTTGCCTTAAAAG
GAAACCAAGTTGCATGGCTGCCCACCCGCCACAGGAACCACATGGCCACACAGGGGGACCTGGG
ACGTCAGAAGAATCCCAGTGGGCTGGGCAGATTCCCAAGGAGCCACACTGACGCCAAAAAGGAG
AGAGAGAGATAGAGAGAGAAAGAGAGAGAGAGAAAATATATATATATACATATATATATATACA
TATAGAAAGAGATAGGTAGATGGAGAAACAGATCTAATAAATCAGGGCAAAGCAAAGAACACTT
GAATCTCTCAGGTTTCGGAGACTCCGAGAAACGGATTTGACGAGGGCCACCAGGGCAACGTCAA
AGCCTAAGGAGGCCACCTTTCCAGAGGCTTCCGTGGGGGTTCGGCGTGACCAGCCTCATTTAAG
CACGTCTGTTTACCTCATGAATCCGGGCACCGCGTGTTCATACCGTTTTGTTTTTGTTTCCTTT
TTTTTTGTTTGTTTGTTTGGGTTTTTTTTTTCCTTTTTGTTATTGTCGTCGTTGTTCCTTGGTC
TTTAACCATGGTTCCTTTCGAGAAAACCAACCTTGGAAGCTATGAATTTTTTTCTTTTTAAAAC
AAGATCTCCACATTCAGACACATTTTTTTTAAGGTAGGGGGGGTTCTGATTTTGTAAATATTCT
ATTTTATTCTTGAGGGCAGGGATTGGATCTTAGGAAGAGTCTATCTGTATATCTATATATTTGT
GTTCATTCAGGGAAACAGACTTTAAAAAAAAAAAGAAGCAAAATACCAGCCATGTCGGTCCCTA
CCCTCGTCACCCCAGAGCCCCTACTTGTCCTCTGATATCCTGCGGTGCCCCTGGCTCAGCTAGG
AGATGCTGGCTTTCAGCAGTTTCCACAGTTCTGTCAGACTGGCCCCACCCACTGGCTCTCATCA
TTCAGGAACCTGGATTGCTTACCCAGGACACAGAATGCTCTAGAAACCGGTAGCGGAGCACAGG
GAATACAATGTCCTCAGGTGTCTCAGGGATGAAGGTCTGCATTCTCCTTGCCTGGATGGGTTGC
AGAGGCAACAGGCTTAGCTCAGGGCAAGGAATCGGGCTTGAGTCACTGCCTCCTGTGTTCCAAC
TCTCTTCCTGTCTTTGTCAACCCCCTTGCTGGGACAGGACCTGAATGTGACAGTGATCAGCCAG
GAAGGGCCCTGCTGTCTCTTAAGGAGGATGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGTG
AGTGAGTTTGTTTGTTCAAGGTCATCCCTGGCTACACATGGAGGTTGAGGCCAGCCTGAGCTAC
TTGAAACCCTGTGGCGCATACCTTTAATCCCAGCACTGAGTGGACCAGCCCGGTCTTACAGTTA
ATTCCAAGCTGCCCAGATTACACAGTGAGAGCCTGTCCAAAAAAAGCTTTCATTTCATTTTGGC
TGGAGCTGCATGCATACTCTCTGCTGGATTGGGGAACCAGTCCTGGACTCAGCCTGGCCTCCTT
TGGCAACCGGGCAGCGCTGGGTTTTCCTGGGCTAGGGTTGGAGCTTGTGCAGAGAGCTGGGAGC
TGGAACCTGCTTGGCCCTCAGCCCCAGGAGTCATGAAGCCTTGAGTTTGTTGTGGGGACTGGAC
CCTCTTTCATCCTCTGTCTCAGGTTATCAACACACCCCTCCTGTCCTTCCAGGAGGGGGTGCTG
CCCATTTGGAGGGGAGGAGGATCTCAACTTTTCCTTCTGGAAGCTTCTGCTTGCCCCTTTTTGG
GGCCACTGTCTTAGCCGCACAATCATTCCTGGTCACGGGTGTTGAGGGGTCCTTGTTCCCTTCT
GACAACCCTGTCCAAAGTCCGCCTCCATGGGTAACCGGCTCAGGGATGTAGCAGCCAGCCTCCC
GTCTCCCTAGTGGGGTCTATCTGAGGGGGGGTCGCCTTGGTGGGCACATCCAAGGCAAATTTCT
TTCTACCTCAGGTTTTTTGATGCCAAAAAGAAAAAAAAAATGCACCCGGGCCACCCACTTCTCT
GGTCACCTTCCCAATGCCCAACAGTGGGAACTTGGTGTCCTGGTGTCCACTTGTCTCTCAGGCT
CTGTGAGTGGCGGAAAGCACCAGATCCTAACTCAGGGGACTTGCCTATCACAGCTCTGTGATTG
TAGTTGGGGGGGTGCCCTCTGCTGGACATACTCAGCCACCCTCCATGGTCCTATCTGCCTCAGT
TGCCCCATTAACCCTTGGCGTGGGTTCCAGTTGGCACTCACACAGACTGGGAGTGGGGACAGAG
CTGGGGTCATCACTGTCCACCTGGCACCTCAGGGCTTGGCGTGGGGCAGGTGAGACACCCAAAC
TCAGGGCAAAGGGTGGAAGGGCAGGCACAGTCTGCTTCTAGAACCTTCCTGGTAGCCCTTATGC
TGGCCACCAGGCCACGTGTGTGTGTGTCTATGTGTCAGGCTGCAGTGGGTGGGTGGGGTGGGGC
TTGGGGACAGCTGGGTTAATGTTTTCTGAGGGTTAATGCGTCTGTACAGTCTTTATTTCTTTCA
TTTTAATCATTTTTACCCACTTTTCCCCCACCCCCACATAATTTTGGCTTTTGTGGATTTTATT
TTTCCTTCTGAGTAAATGTGAGCTGAGCTGCTTTGTTAGCAATGTGTGAACTTTTCAGTTTCTT
GGGGGTGGGGGGGGGCTTGTCCGACAGCGTGGGGATCACACAGAAACTCAGGTAAAATTAAAAA
AAAAAAGTGGATTAAAAAAAAAAAGAAAAGAAAAAAACTGTTTTCTACCTCTGGTCAGGCCTCT
GTGGCCAGTTCCCGCCTAGGCTGTGGCCTGCAATGGTCACAGTTGTGCCGAATACTCAGGAAAA
TCCAGCTATTAACAGAAAAACTCAAACAGACAACAATGGGGAGGAAAGGTGTGATTTTTGAAAT
TAAAAAAAAAAAAACACTGAAAGTTTACATTTTATGATCTTATTGTGGATTGTATTTAAACCTC
AAAAATATTTAACGGGATTGTAACCGTGTAAATCCGTGATATTAAAGCGTTGAGACACTTCTGA
GAAAGA

hide sequence

RefSeq Acc Id:

XM_006240904 ⟹ XP_006240966

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	9,755,542 - 9,780,290 (-)	NCBI
Rnor_6.0	7	12,573,604 - 12,601,404 (-)	NCBI
Rnor_5.0	7	12,745,711 - 12,771,710 (-)	NCBI

Sequence:

show sequence

GGGGGCCGGTCGCGCGCGGAGACCTCGTCCCTATCCGATCCACACGGATGGAGATGTAGACGCG
GCCTAGAGACTCGGTGAGGCGGGTGACCCCGGAGCCAGGAGCGTGCGCCAGGGGAAGGCCAAGG
GGGAGAAAGGCCACCGGAGGCCACCAGCAGGCTGGACTCTGGGCACCCGGGCATGCGCCCCCCG
GGCCACCCCGAGCGGAGTCTGCAGGTGCTTGAATGAGCCCGACACCAGCCTCTGCCCCTGGGTG
CCCGACGTAACAACAAGGATCCCACTGGTCGCCCCTGGCATGCCCCACCAGCCTTCACCCTGAG
TTGGCAGCCCCCACCCCTGCCAGCCGTCACCCTGCATTGTTCCGGCTCCCCCGAAGTCCCCACG
CTGCAGTGCGGCCAAGACCCCTCCCCACGGGGGCCACCCCCACCAAGTGCCCCTGGTGCCCGGG
GTGGCCCGGCCCGTCGGGCCATGAAGCTGCAGGCAGTGATGGAGACTCTTATTCAGAGGCAACA
GCGAGCCCGGCAGGAACTGGAGGCTCGACAGCCTCCACTACCCCCACCACCGGAGCCCGCTGGT
GTCCAGGCTCGGACCACCATGACAGATGAGGACAGGGAGCCTGAGAATGCCCGTATGCATAGGA
CGCAGATGGCTGCACTGGCTGCCATGCGGGCTGCTGCCGCCGGCTTGAGACATCCGTCCTCTCC
CGGGGGCTCGGAGGACGAAGACACAGCCCAGGGAGGGACTCTGAGTTCACCTGCCCTGCATGGA
AGTGGCCAGGAGGGACCGGGACACACTGAGGGAGACGGCCATTTGATGGACATGGGCTCCGATG
ATGACACGAAGCCCAAGTGGGAAGAACAAGAGCTGGAAGAACTGGGGGAAGAGGAAGAGGAGGA
GGATGAAGATGACTTTGAGGAAGAAGAGGAGGATGAGGAGGAAGAAGGCCTGGGCCTCCCAGAG
TCTGCCAGCCTGGGCTCCGCAGGCCTGTTTACCCGCAAGGCCCCACCTACTCAGACCTTCCGTG
GAGACGGTGGTCCCAGAATGCTCAGTGGCCCTGAGCGCCTGGGACCTGGCCCGGCCCACCCCAG
TCATGTGGCGTCCCAGATGCCACCACCGGACCATGGGGACTGGACATTTGAGGAGCAGTTCAAA
CAGCTCTATGAACTGGACGCAGACCCCAAGAGGAAAGAGTTCCTGGACGACCTGTTCAGCTTCA
TGCAGAAGCGGGGCACTCCGGTGAACCGGATCCCCATCATGGCCAAGCAGGTCCTCGACCTGTT
CATGCTGTATGTGCTGGTGACGGAAAAGGGCGGTCTGGTAGAGGTTATCAACAAGAAGCTGTGG
AGGGAGATCACCAAGGGGCTCAACCTGCCCACCTCCATCACCAGTGCTGCCTTCACACTTCGGA
CACAGTACATGAAGTATCTTTACCCCTATGAGTGTGAGAGGCGAGGCCTGAGCAGCCCCAATGA
GCTCCAGGCTGCCATAGACAGCAACCGCCGGGAGGGCAGGCGCCAGAGCTTCGGGGGCTCCCTC
TTTGCTTACTCACCCAGTGGAGCCCACAGCATGCTGTCCTCACCCAAGCTACCGGTGACTTCTT
TGGGCCTTGCTGCCAGCACCAATGGCAGCTCTATCACCCCAACACCCAAGATCAAGAAAGAGGA
AGACTCAGCCATCCCCATCACAGTCCCAGGCCGCCTACCCGTGTCTCTGGCAGGCCACCCTGTC
GTAGCAGCCCAGGCAGCGGCTGTGCAAGCCGCAGCAGCCCAGGCTGCAGTTGCGGCCCAGGCAG
CCGCCCTGGAACAACTCCGGGAGAAGCTGGAATCCACGGAGCCTCCGGAAAAGAAGATGGCCCT
GGTTGCAGATGAGCAGCAGCGTCTCATGCAGCGAGCCGTGCAGCAGAGCTTCCTGGCCATGACA
GCCCAGCTGCCCATGAACATCCGGATCAACAGCCAAGCCTCTGAGAGTCGCCAGGACCCAGCTG
TAAATCTCACCAGTGCCAATGGCAGCAACAGTATTAGCATGTCCGTGGAGATGAACGGTATTGT
ATACACAGGGGTGCTGTTCGCTCAGCCACCACCTCCTACGCCACCTCCCGCCTCCAGCAAAGGT
GGTGTGAGCAGCATTGGTACCAACAACACCATGGGTAACCGGACAGGAGCCAGTGGCAGTGCTG
GCAGCAGCGGCCAAGTGGGGCTGGCTGGGGTGTCTGCACCCACCATGTCTTCTACCTCAAATAA
CTCCTTGCCTTAAAAGGAAACCAAGTTGCATGGCTGCCCACCCGCCACAGGAACCACATGGCCA
CACAGGGGGACCTGGGACGTCAGAAGAATCCCAGTGGGCTGGGCAGATTCCCAAGGAGCCACAC
TGACGCCAAAAAGGAGAGAGAGAGATAGAGAGAGAAAGAGAGAGAGAGAAAATATATATATATA
CATATATATATATACATATAGAAAGAGATAGGTAGATGGAGAAACAGATCTAATAAATCAGGGC
AAAGCAAAGAACACTTGAATCTCTCAGGTTTCGGAGACTCCGAGAAACGGATTTGACGAGGGCC
ACCAGGGCAACGTCAAAGCCTAAGGAGGCCACCTTTCCAGAGGCTTCCGTGGGGGTTCGGCGTG
ACCAGCCTCATTTAAGCACGTCTGTTTACCTCATGAATCCGGGCACCGCGTGTTCATACCGTTT
TGTTTTTGTTTCCTTTTTTTTTGTTTGTTTGTTTGGGTTTTTTTTTTCCTTTTTGTTATTGTCG
TCGTTGTTCCTTGGTCTTTAACCATGGTTCCTTTCGAGAAAACCAACCTTGGAAGCTATGAATT
TTTTTCTTTTTAAAACAAGATCTCCACATTCAGACACATTTTTTTTAAGGTAGGGGGGGTTCTG
ATTTTGTAAATATTCTATTTTATTCTTGAGGGCAGGGATTGGATCTTAGGAAGAGTCTATCTGT
ATATCTATATATTTGTGTTCATTCAGGGAAACAGACTTTAAAAAAAAAAAGAAGCAAAATACCA
GCCATGTCGGTCCCTACCCTCGTCACCCCAGAGCCCCTACTTGTCCTCTGATATCCTGCGGTGC
CCCTGGCTCAGCTAGGAGATGCTGGCTTTCAGCAGTTTCCACAGTTCTGTCAGACTGGCCCCAC
CCACTGGCTCTCATCATTCAGGAACCTGGATTGCTTACCCAGGACACAGAATGCTCTAGAAACC
GGTAGCGGAGCACAGGGAATACAATGTCCTCAGGTGTCTCAGGGATGAAGGTCTGCATTCTCCT
TGCCTGGATGGGTTGCAGAGGCAACAGGCTTAGCTCAGGGCAAGGAATCGGGCTTGAGTCACTG
CCTCCTGTGTTCCAACTCTCTTCCTGTCTTTGTCAACCCCCTTGCTGGGACAGGACCTGAATGT
GACAGTGATCAGCCAGGAAGGGCCCTGCTGTCTCTTAAGGAGGATGAGGCAGAGAGAGAGAGAG
AGAGAGAGAGAGAGTGAGTGAGTTTGTTTGTTCAAGGTCATCCCTGGCTACACATGGAGGTTGA
GGCCAGCCTGAGCTACTTGAAACCCTGTGGCGCATACCTTTAATCCCAGCACTGAGTGGACCAG
CCCGGTCTTACAGTTAATTCCAAGCTGCCCAGATTACACAGTGAGAGCCTGTCCAAAAAAAGCT
TTCATTTCATTTTGGCTGGAGCTGCATGCATACTCTCTGCTGGATTGGGGAACCAGTCCTGGAC
TCAGCCTGGCCTCCTTTGGCAACCGGGCAGCGCTGGGTTTTCCTGGGCTAGGGTTGGAGCTTGT
GCAGAGAGCTGGGAGCTGGAACCTGCTTGGCCCTCAGCCCCAGGAGTCATGAAGCCTTGAGTTT
GTTGTGGGGACTGGACCCTCTTTCATCCTCTGTCTCAGGTTATCAACACACCCCTCCTGTCCTT
CCAGGAGGGGGTGCTGCCCATTTGGAGGGGAGGAGGATCTCAACTTTTCCTTCTGGAAGCTTCT
GCTTGCCCCTTTTTGGGGCCACTGTCTTAGCCGCACAATCATTCCTGGTCACGGGTGTTGAGGG
GTCCTTGTTCCCTTCTGACAACCCTGTCCAAAGTCCGCCTCCATGGGTAACCGGCTCAGGGATG
TAGCAGCCAGCCTCCCGTCTCCCTAGTGGGGTCTATCTGAGGGGGGGTCGCCTTGGTGGGCACA
TCCAAGGCAAATTTCTTTCTACCTCAGGTTTTTTGATGCCAAAAAGAAAAAAAAAATGCACCCG
GGCCACCCACTTCTCTGGTCACCTTCCCAATGCCCAACAGTGGGAACTTGGTGTCCTGGTGTCC
ACTTGTCTCTCAGGCTCTGTGAGTGGCGGAAAGCACCAGATCCTAACTCAGGGGACTTGCCTAT
CACAGCTCTGTGATTGTAGTTGGGGGGGTGCCCTCTGCTGGACATACTCAGCCACCCTCCATGG
TCCTATCTGCCTCAGTTGCCCCATTAACCCTTGGCGTGGGTTCCAGTTGGCACTCACACAGACT
GGGAGTGGGGACAGAGCTGGGGTCATCACTGTCCACCTGGCACCTCAGGGCTTGGCGTGGGGCA
GGTGAGACACCCAAACTCAGGGCAAAGGGTGGAAGGGCAGGCACAGTCTGCTTCTAGAACCTTC
CTGGTAGCCCTTATGCTGGCCACCAGGCCACGTGTGTGTGTGTCTATGTGTCAGGCTGCAGTGG
GTGGGTGGGGTGGGGCTTGGGGACAGCTGGGTTAATGTTTTCTGAGGGTTAATGCGTCTGTACA
GTCTTTATTTCTTTCATTTTAATCATTTTTACCCACTTTTCCCCCACCCCCACATAATTTTGGC
TTTTGTGGATTTTATTTTTCCTTCTGAGTAAATGTGAGCTGAGCTGCTTTGTTAGCAATGTGTG
AACTTTTCAGTTTCTTGGGGGTGGGGGGGGGCTTGTCCGACAGCGTGGGGATCACACAGAAACT
CAGGTAAAATTAAAAAAAAAAAGTGGATTAAAAAAAAAAAGAAAAGAAAAAAACTGTTTTCTAC
CTCTGGTCAGGCCTCTGTGGCCAGTTCCCGCCTAGGCTGTGGCCTGCAATGGTCACAGTTGTGC
CGAATACTCAGGAAAATCCAGCTATTAACAGAAAAACTCAAACAGACAACAATGGGGAGGAAAG
GTGTGATTTTTGAAATTAAAAAAAAAAAAACACTGAAAGTTTACATTTTATGATCTTATTGTGG
ATTGTATTTAAACCTCAAAAATATTTAACGGGATTGTAACCGTGTAAATCCGTGATATTAAAGC
GTTGAGACACTTCTGAGAAAGA

hide sequence

RefSeq Acc Id:

XM_006240905 ⟹ XP_006240967

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	9,755,542 - 9,781,260 (-)	NCBI
Rnor_6.0	7	12,573,604 - 12,602,407 (-)	NCBI
Rnor_5.0	7	12,745,711 - 12,771,710 (-)	NCBI

Sequence:

show sequence

GTGGCTTTCAAGGGGCAGACTGCTCAAGATCCCAACAGTCCAACAAGGGAGCTGGCCCAACCAT
GGGGAATTTGTAGAAGTCGGGGGTTGCCCTGAGCACTGGCGTTACCCACTAGGGTCGCCTCGAC
TTCTGGCTGAGCTCACATCATGCCTCAGTTTCCCATTTCTGCAAAATGGGACCTCAATCCAGTA
CTCTACCAAGAAGAACTGGTTGGACGAGGCAGGGGCTTCACTGAGTTGGTTCACTGAGATGGCT
CTCCTTTCCCTGGCTCATAGGTGGGGTCGTCACGGTTCCTCGCATTTCCTCGAACGCGCGCGCA
GCCCAATCCCGTGCTTTTGCGCACGCAGCACCCTCACACCCCCGCGTTCCGGCCCCCGCAGATC
TAGCCTCTCCGGGGTTTTAAAGCCCATTTCAGAGGCGCGGAGCCCCAGGCTGGGAAGGTTTGGG
TAGCATCGTGGGCGGAGGTTCCAGCTCCAAGCTTGGCTGATCCATCTCACGTTCCGAGTGAAAC
CAGGAAACGACCGGGGGCCCAGGTGGCTTTCCGCTCCGAGGTGGGGAGTCTGCAGGTGCTTGAA
TGAGCCCGACACCAGCCTCTGCCCCTGGGTGCCCGACGTAACAACAAGGATCCCACTGGTCGCC
CCTGGCATGCCCCACCAGCCTTCACCCTGAGTTGGCAGCCCCCACCCCTGCCAGCCGTCACCCT
GCATTGTTCCGGCTCCCCCGAAGTCCCCACGCTGCAGTGCGGCCAAGACCCCTCCCCACGGGGG
CCACCCCCACCAAGTGCCCCTGGTGCCCGGGGTGGCCCGGCCCGTCGGGCCATGAAGCTGCAGG
CAGTGATGGAGACTCTTATTCAGAGGCAACAGCGAGCCCGGCAGGAACTGGAGGCTCGACAGCC
TCCACTACCCCCACCACCGGAGCCCGCTGGTGTCCAGGCTCGGACCACCATGACAGATGAGGAC
AGGGAGCCTGAGAATGCCCGTATGCATAGGACGCAGATGGCTGCACTGGCTGCCATGCGGGCTG
CTGCCGCCGGCTTGAGACATCCGTCCTCTCCCGGGGGCTCGGAGGACGAAGACACAGCCCAGGG
AGGGACTCTGAGTTCACCTGCCCTGCATGGAAGTGGCCAGGAGGGACCGGGACACACTGAGGGA
GACGGCCATTTGATGGACATGGGCTCCGATGATGACACGAAGCCCAAGTGGGAAGAACAAGAGC
TGGAAGAACTGGGGGAAGAGGAAGAGGAGGAGGATGAAGATGACTTTGAGGAAGAAGAGGAGGA
TGAGGAGGAAGAAGGCCTGGGCCTCCCAGAGTCTGCCAGCCTGGGCTCCGCAGGCCTGTTTACC
CGCAAGGCCCCACCTACTCAGACCTTCCGTGGAGACGGTGGTCCCAGAATGCTCAGTGGCCCTG
AGCGCCTGGGACCTGGCCCGGCCCACCCCAGTCATGTGGCGTCCCAGATGCCACCACCGGACCA
TGGGGACTGGACATTTGAGGAGCAGTTCAAACAGCTCTATGAACTGGACGCAGACCCCAAGAGG
AAAGAGTTCCTGGACGACCTGTTCAGCTTCATGCAGAAGCGGGGCACTCCGGTGAACCGGATCC
CCATCATGGCCAAGCAGGTCCTCGACCTGTTCATGCTGTATGTGCTGGTGACGGAAAAGGGCGG
TCTGGTAGAGGTTATCAACAAGAAGCTGTGGAGGGAGATCACCAAGGGGCTCAACCTGCCCACC
TCCATCACCAGTGCTGCCTTCACACTTCGGACACAGTACATGAAGTATCTTTACCCCTATGAGT
GTGAGAGGCGAGGCCTGAGCAGCCCCAATGAGCTCCAGGCTGCCATAGACAGCAACCGCCGGGA
GGGCAGGCGCCAGAGCTTCGGGGGCTCCCTCTTTGCTTACTCACCCAGTGGAGCCCACAGCATG
CTGTCCTCACCCAAGCTACCGGTGACTTCTTTGGGCCTTGCTGCCAGCACCAATGGCAGCTCTA
TCACCCCAACACCCAAGATCAAGAAAGAGGAAGACTCAGCCATCCCCATCACAGTCCCAGGCCG
CCTACCCGTGTCTCTGGCAGGCCACCCTGTCGTAGCAGCCCAGGCAGCGGCTGTGCAAGCCGCA
GCAGCCCAGGCTGCAGTTGCGGCCCAGGCAGCCGCCCTGGAACAACTCCGGGAGAAGCTGGAAT
CCACGGAGCCTCCGGAAAAGAAGATGGCCCTGGTTGCAGATGAGCAGCAGCGTCTCATGCAGCG
AGCCGTGCAGCAGAGCTTCCTGGCCATGACAGCCCAGCTGCCCATGAACATCCGGATCAACAGC
CAAGCCTCTGAGAGTCGCCAGGACCCAGCTGTAAATCTCACCAGTGCCAATGGCAGCAACAGTA
TTAGCATGTCCGTGGAGATGAACGGTATTGTATACACAGGGGTGCTGTTCGCTCAGCCACCACC
TCCTACGCCACCTCCCGCCTCCAGCAAAGGTGGTGTGAGCAGCATTGGTACCAACAACACCATG
GGTAACCGGACAGGAGCCAGTGGCAGTGCTGGCAGCAGCGGCCAAGTGGGGCTGGCTGGGGTGT
CTGCACCCACCATGTCTTCTACCTCAAATAACTCCTTGCCTTAAAAGGAAACCAAGTTGCATGG
CTGCCCACCCGCCACAGGAACCACATGGCCACACAGGGGGACCTGGGACGTCAGAAGAATCCCA
GTGGGCTGGGCAGATTCCCAAGGAGCCACACTGACGCCAAAAAGGAGAGAGAGAGATAGAGAGA
GAAAGAGAGAGAGAGAAAATATATATATATACATATATATATATACATATAGAAAGAGATAGGT
AGATGGAGAAACAGATCTAATAAATCAGGGCAAAGCAAAGAACACTTGAATCTCTCAGGTTTCG
GAGACTCCGAGAAACGGATTTGACGAGGGCCACCAGGGCAACGTCAAAGCCTAAGGAGGCCACC
TTTCCAGAGGCTTCCGTGGGGGTTCGGCGTGACCAGCCTCATTTAAGCACGTCTGTTTACCTCA
TGAATCCGGGCACCGCGTGTTCATACCGTTTTGTTTTTGTTTCCTTTTTTTTTGTTTGTTTGTT
TGGGTTTTTTTTTTCCTTTTTGTTATTGTCGTCGTTGTTCCTTGGTCTTTAACCATGGTTCCTT
TCGAGAAAACCAACCTTGGAAGCTATGAATTTTTTTCTTTTTAAAACAAGATCTCCACATTCAG
ACACATTTTTTTTAAGGTAGGGGGGGTTCTGATTTTGTAAATATTCTATTTTATTCTTGAGGGC
AGGGATTGGATCTTAGGAAGAGTCTATCTGTATATCTATATATTTGTGTTCATTCAGGGAAACA
GACTTTAAAAAAAAAAAGAAGCAAAATACCAGCCATGTCGGTCCCTACCCTCGTCACCCCAGAG
CCCCTACTTGTCCTCTGATATCCTGCGGTGCCCCTGGCTCAGCTAGGAGATGCTGGCTTTCAGC
AGTTTCCACAGTTCTGTCAGACTGGCCCCACCCACTGGCTCTCATCATTCAGGAACCTGGATTG
CTTACCCAGGACACAGAATGCTCTAGAAACCGGTAGCGGAGCACAGGGAATACAATGTCCTCAG
GTGTCTCAGGGATGAAGGTCTGCATTCTCCTTGCCTGGATGGGTTGCAGAGGCAACAGGCTTAG
CTCAGGGCAAGGAATCGGGCTTGAGTCACTGCCTCCTGTGTTCCAACTCTCTTCCTGTCTTTGT
CAACCCCCTTGCTGGGACAGGACCTGAATGTGACAGTGATCAGCCAGGAAGGGCCCTGCTGTCT
CTTAAGGAGGATGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGTGAGTTTGTTTGTTC
AAGGTCATCCCTGGCTACACATGGAGGTTGAGGCCAGCCTGAGCTACTTGAAACCCTGTGGCGC
ATACCTTTAATCCCAGCACTGAGTGGACCAGCCCGGTCTTACAGTTAATTCCAAGCTGCCCAGA
TTACACAGTGAGAGCCTGTCCAAAAAAAGCTTTCATTTCATTTTGGCTGGAGCTGCATGCATAC
TCTCTGCTGGATTGGGGAACCAGTCCTGGACTCAGCCTGGCCTCCTTTGGCAACCGGGCAGCGC
TGGGTTTTCCTGGGCTAGGGTTGGAGCTTGTGCAGAGAGCTGGGAGCTGGAACCTGCTTGGCCC
TCAGCCCCAGGAGTCATGAAGCCTTGAGTTTGTTGTGGGGACTGGACCCTCTTTCATCCTCTGT
CTCAGGTTATCAACACACCCCTCCTGTCCTTCCAGGAGGGGGTGCTGCCCATTTGGAGGGGAGG
AGGATCTCAACTTTTCCTTCTGGAAGCTTCTGCTTGCCCCTTTTTGGGGCCACTGTCTTAGCCG
CACAATCATTCCTGGTCACGGGTGTTGAGGGGTCCTTGTTCCCTTCTGACAACCCTGTCCAAAG
TCCGCCTCCATGGGTAACCGGCTCAGGGATGTAGCAGCCAGCCTCCCGTCTCCCTAGTGGGGTC
TATCTGAGGGGGGGTCGCCTTGGTGGGCACATCCAAGGCAAATTTCTTTCTACCTCAGGTTTTT
TGATGCCAAAAAGAAAAAAAAAATGCACCCGGGCCACCCACTTCTCTGGTCACCTTCCCAATGC
CCAACAGTGGGAACTTGGTGTCCTGGTGTCCACTTGTCTCTCAGGCTCTGTGAGTGGCGGAAAG
CACCAGATCCTAACTCAGGGGACTTGCCTATCACAGCTCTGTGATTGTAGTTGGGGGGGTGCCC
TCTGCTGGACATACTCAGCCACCCTCCATGGTCCTATCTGCCTCAGTTGCCCCATTAACCCTTG
GCGTGGGTTCCAGTTGGCACTCACACAGACTGGGAGTGGGGACAGAGCTGGGGTCATCACTGTC
CACCTGGCACCTCAGGGCTTGGCGTGGGGCAGGTGAGACACCCAAACTCAGGGCAAAGGGTGGA
AGGGCAGGCACAGTCTGCTTCTAGAACCTTCCTGGTAGCCCTTATGCTGGCCACCAGGCCACGT
GTGTGTGTGTCTATGTGTCAGGCTGCAGTGGGTGGGTGGGGTGGGGCTTGGGGACAGCTGGGTT
AATGTTTTCTGAGGGTTAATGCGTCTGTACAGTCTTTATTTCTTTCATTTTAATCATTTTTACC
CACTTTTCCCCCACCCCCACATAATTTTGGCTTTTGTGGATTTTATTTTTCCTTCTGAGTAAAT
GTGAGCTGAGCTGCTTTGTTAGCAATGTGTGAACTTTTCAGTTTCTTGGGGGTGGGGGGGGGCT
TGTCCGACAGCGTGGGGATCACACAGAAACTCAGGTAAAATTAAAAAAAAAAAGTGGATTAAAA
AAAAAAAGAAAAGAAAAAAACTGTTTTCTACCTCTGGTCAGGCCTCTGTGGCCAGTTCCCGCCT
AGGCTGTGGCCTGCAATGGTCACAGTTGTGCCGAATACTCAGGAAAATCCAGCTATTAACAGAA
AAACTCAAACAGACAACAATGGGGAGGAAAGGTGTGATTTTTGAAATTAAAAAAAAAAAAACAC
TGAAAGTTTACATTTTATGATCTTATTGTGGATTGTATTTAAACCTCAAAAATATTTAACGGGA
TTGTAACCGTGTAAATCCGTGATATTAAAGCGTTGAGACACTTCTGAGAAAGA

hide sequence

RefSeq Acc Id:

XM_008765169 ⟹ XP_008763391

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	9,755,542 - 9,780,333 (-)	NCBI
Rnor_6.0	7	12,573,604 - 12,601,403 (-)	NCBI

Sequence:

show sequence

GGGGCCGGTCGCGCGCGGAGACCTCGTCCCTATCCGATCCACACGGATGGAGATGTAGACGCGG
CCTAGAGACTCGGAGTCTGCAGGTGCTTGAATGAGCCCGACACCAGCCTCTGCCCCTGGGTGCC
CGACGTAACAACAAGGATCCCACTGGTCGCCCCTGGCATGCCCCACCAGCCTTCACCCTGAGTT
GGCAGCCCCCACCCCTGCCAGCCGTCACCCTGCATTGTTCCGGCTCCCCCGAAGTCCCCACGCT
GCAGTGCGGCCAAGACCCCTCCCCACGGGGGCCACCCCCACCAAGTGCCCCTGGTGCCCGGGGT
GGCCCGGCCCGTCGGGCCATGAAGCTGCAGGCAGTGATGGAGACTCTTATTCAGAGGCAACAGC
GAGCCCGGCAGGAACTGGAGGCTCGACAGCCTCCACTACCCCCACCACCGGAGCCCGCTGGTGT
CCAGGCTCGGACCACCATGACAGATGAGGACAGGGAGCCTGAGAATGCCCGTATGCATAGGACG
CAGATGGCTGCACTGGCTGCCATGCGGGCTGCTGCCGCCGGCTTGAGACATCCGTCCTCTCCCG
GGGGCTCGGAGGACGAAGACACAGCCCAGGGAGGGACTCTGAGTTCACCTGCCCTGCATGGAAG
TGGCCAGGAGGGACCGGGACACACTGAGGGAGACGGCCATTTGATGGACATGGGCTCCGATGAT
GACACGAAGCCCAAGTGGGAAGAACAAGAGCTGGAAGAACTGGGGGAAGAGGAAGAGGAGGAGG
ATGAAGATGACTTTGAGGAAGAAGAGGAGGATGAGGAGGAAGAAGGCCTGGGCCTCCCAGAGTC
TGCCAGCCTGGGCTCCGCAGGCCTGTTTACCCGCAAGGCCCCACCTACTCAGACCTTCCGTGGA
GACGGTGGTCCCAGAATGCTCAGTGGCCCTGAGCGCCTGGGACCTGGCCCGGCCCACCCCAGTC
ATGTGGCGTCCCAGATGCCACCACCGGACCATGGGGACTGGACATTTGAGGAGCAGTTCAAACA
GCTCTATGAACTGGACGCAGACCCCAAGAGGAAAGAGTTCCTGGACGACCTGTTCAGCTTCATG
CAGAAGCGGGGCACTCCGGTGAACCGGATCCCCATCATGGCCAAGCAGGTCCTCGACCTGTTCA
TGCTGTATGTGCTGGTGACGGAAAAGGGCGGTCTGGTAGAGGTTATCAACAAGAAGCTGTGGAG
GGAGATCACCAAGGGGCTCAACCTGCCCACCTCCATCACCAGTGCTGCCTTCACACTTCGGACA
CAGTACATGAAGTATCTTTACCCCTATGAGTGTGAGAGGCGAGGCCTGAGCAGCCCCAATGAGC
TCCAGGCTGCCATAGACAGCAACCGCCGGGAGGGCAGGCGCCAGAGCTTCGGGGGCTCCCTCTT
TGCTTACTCACCCAGTGGAGCCCACAGCATGCTGTCCTCACCCAAGCTACCGGTGACTTCTTTG
GGCCTTGCTGCCAGCACCAATGGCAGCTCTATCACCCCAACACCCAAGATCAAGAAAGAGGAAG
ACTCAGCCATCCCCATCACAGTCCCAGGCCGCCTACCCGTGTCTCTGGCAGGCCACCCTGTCGT
AGCAGCCCAGGCAGCGGCTGTGCAAGCCGCAGCAGCCCAGGCTGCAGTTGCGGCCCAGGCAGCC
GCCCTGGAACAACTCCGGGAGAAGCTGGAATCCACGGAGCCTCCGGAAAAGAAGATGGCCCTGG
TTGCAGATGAGCAGCAGCGTCTCATGCAGCGAGCCGTGCAGCAGAGCTTCCTGGCCATGACAGC
CCAGCTGCCCATGAACATCCGGATCAACAGCCAAGCCTCTGAGAGTCGCCAGGACCCAGCTGTA
AATCTCACCAGTGCCAATGGCAGCAACAGTATTAGCATGTCCGTGGAGATGAACGGTATTGTAT
ACACAGGGGTGCTGTTCGCTCAGCCACCACCTCCTACGCCACCTCCCGCCTCCAGCAAAGGTGG
TGTGAGCAGCATTGGTACCAACAACACCATGGGTAACCGGACAGGAGCCAGTGGCAGTGCTGGC
AGCAGCGGCCAAGTGGGGCTGGCTGGGGTGTCTGCACCCACCATGTCTTCTACCTCAAATAACT
CCTTGCCTTAAAAGGAAACCAAGTTGCATGGCTGCCCACCCGCCACAGGAACCACATGGCCACA
CAGGGGGACCTGGGACGTCAGAAGAATCCCAGTGGGCTGGGCAGATTCCCAAGGAGCCACACTG
ACGCCAAAAAGGAGAGAGAGAGATAGAGAGAGAAAGAGAGAGAGAGAAAATATATATATATACA
TATATATATATACATATAGAAAGAGATAGGTAGATGGAGAAACAGATCTAATAAATCAGGGCAA
AGCAAAGAACACTTGAATCTCTCAGGTTTCGGAGACTCCGAGAAACGGATTTGACGAGGGCCAC
CAGGGCAACGTCAAAGCCTAAGGAGGCCACCTTTCCAGAGGCTTCCGTGGGGGTTCGGCGTGAC
CAGCCTCATTTAAGCACGTCTGTTTACCTCATGAATCCGGGCACCGCGTGTTCATACCGTTTTG
TTTTTGTTTCCTTTTTTTTTGTTTGTTTGTTTGGGTTTTTTTTTTCCTTTTTGTTATTGTCGTC
GTTGTTCCTTGGTCTTTAACCATGGTTCCTTTCGAGAAAACCAACCTTGGAAGCTATGAATTTT
TTTCTTTTTAAAACAAGATCTCCACATTCAGACACATTTTTTTTAAGGTAGGGGGGGTTCTGAT
TTTGTAAATATTCTATTTTATTCTTGAGGGCAGGGATTGGATCTTAGGAAGAGTCTATCTGTAT
ATCTATATATTTGTGTTCATTCAGGGAAACAGACTTTAAAAAAAAAAAGAAGCAAAATACCAGC
CATGTCGGTCCCTACCCTCGTCACCCCAGAGCCCCTACTTGTCCTCTGATATCCTGCGGTGCCC
CTGGCTCAGCTAGGAGATGCTGGCTTTCAGCAGTTTCCACAGTTCTGTCAGACTGGCCCCACCC
ACTGGCTCTCATCATTCAGGAACCTGGATTGCTTACCCAGGACACAGAATGCTCTAGAAACCGG
TAGCGGAGCACAGGGAATACAATGTCCTCAGGTGTCTCAGGGATGAAGGTCTGCATTCTCCTTG
CCTGGATGGGTTGCAGAGGCAACAGGCTTAGCTCAGGGCAAGGAATCGGGCTTGAGTCACTGCC
TCCTGTGTTCCAACTCTCTTCCTGTCTTTGTCAACCCCCTTGCTGGGACAGGACCTGAATGTGA
CAGTGATCAGCCAGGAAGGGCCCTGCTGTCTCTTAAGGAGGATGAGGCAGAGAGAGAGAGAGAG
AGAGAGAGAGAGTGAGTGAGTTTGTTTGTTCAAGGTCATCCCTGGCTACACATGGAGGTTGAGG
CCAGCCTGAGCTACTTGAAACCCTGTGGCGCATACCTTTAATCCCAGCACTGAGTGGACCAGCC
CGGTCTTACAGTTAATTCCAAGCTGCCCAGATTACACAGTGAGAGCCTGTCCAAAAAAAGCTTT
CATTTCATTTTGGCTGGAGCTGCATGCATACTCTCTGCTGGATTGGGGAACCAGTCCTGGACTC
AGCCTGGCCTCCTTTGGCAACCGGGCAGCGCTGGGTTTTCCTGGGCTAGGGTTGGAGCTTGTGC
AGAGAGCTGGGAGCTGGAACCTGCTTGGCCCTCAGCCCCAGGAGTCATGAAGCCTTGAGTTTGT
TGTGGGGACTGGACCCTCTTTCATCCTCTGTCTCAGGTTATCAACACACCCCTCCTGTCCTTCC
AGGAGGGGGTGCTGCCCATTTGGAGGGGAGGAGGATCTCAACTTTTCCTTCTGGAAGCTTCTGC
TTGCCCCTTTTTGGGGCCACTGTCTTAGCCGCACAATCATTCCTGGTCACGGGTGTTGAGGGGT
CCTTGTTCCCTTCTGACAACCCTGTCCAAAGTCCGCCTCCATGGGTAACCGGCTCAGGGATGTA
GCAGCCAGCCTCCCGTCTCCCTAGTGGGGTCTATCTGAGGGGGGGTCGCCTTGGTGGGCACATC
CAAGGCAAATTTCTTTCTACCTCAGGTTTTTTGATGCCAAAAAGAAAAAAAAAATGCACCCGGG
CCACCCACTTCTCTGGTCACCTTCCCAATGCCCAACAGTGGGAACTTGGTGTCCTGGTGTCCAC
TTGTCTCTCAGGCTCTGTGAGTGGCGGAAAGCACCAGATCCTAACTCAGGGGACTTGCCTATCA
CAGCTCTGTGATTGTAGTTGGGGGGGTGCCCTCTGCTGGACATACTCAGCCACCCTCCATGGTC
CTATCTGCCTCAGTTGCCCCATTAACCCTTGGCGTGGGTTCCAGTTGGCACTCACACAGACTGG
GAGTGGGGACAGAGCTGGGGTCATCACTGTCCACCTGGCACCTCAGGGCTTGGCGTGGGGCAGG
TGAGACACCCAAACTCAGGGCAAAGGGTGGAAGGGCAGGCACAGTCTGCTTCTAGAACCTTCCT
GGTAGCCCTTATGCTGGCCACCAGGCCACGTGTGTGTGTGTCTATGTGTCAGGCTGCAGTGGGT
GGGTGGGGTGGGGCTTGGGGACAGCTGGGTTAATGTTTTCTGAGGGTTAATGCGTCTGTACAGT
CTTTATTTCTTTCATTTTAATCATTTTTACCCACTTTTCCCCCACCCCCACATAATTTTGGCTT
TTGTGGATTTTATTTTTCCTTCTGAGTAAATGTGAGCTGAGCTGCTTTGTTAGCAATGTGTGAA
CTTTTCAGTTTCTTGGGGGTGGGGGGGGGCTTGTCCGACAGCGTGGGGATCACACAGAAACTCA
GGTAAAATTAAAAAAAAAAAGTGGATTAAAAAAAAAAAGAAAAGAAAAAAACTGTTTTCTACCT
CTGGTCAGGCCTCTGTGGCCAGTTCCCGCCTAGGCTGTGGCCTGCAATGGTCACAGTTGTGCCG
AATACTCAGGAAAATCCAGCTATTAACAGAAAAACTCAAACAGACAACAATGGGGAGGAAAGGT
GTGATTTTTGAAATTAAAAAAAAAAAAACACTGAAAGTTTACATTTTATGATCTTATTGTGGAT
TGTATTTAAACCTCAAAAATATTTAACGGGATTGTAACCGTGTAAATCCGTGATATTAAAGCGT
TGAGACACTTCTGAGAAAGA

hide sequence

RefSeq Acc Id:

XM_017594812 ⟹ XP_017450301

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	9,755,542 - 9,781,260 (-)	NCBI
Rnor_6.0	7	12,573,604 - 12,602,407 (-)	NCBI

Sequence:

show sequence

GTGGCTTTCAAGGGGCAGACTGCTCAAGATCCCAACAGTCCAACAAGGGAGCTGGCCCAACCAT
GGGGAATTTGTAGAAGTCGGGGGTTGCCCTGAGCACTGGCGTTACCCACTAGGGTCGCCTCGAC
TTCTGGCTGAGCTCACATCATGCCTCAGTTTCCCATTTCTGCAAAATGGGACCTCAATCCAGTA
CTCTACCAAGAAGAACTGGTTGGACGAGGCAGGGGCTTCACTGAGTTGGTTCACTGAGATGGCT
CTCCTTTCCCTGGCTCATAGGTGGGGTCGTCACGGTTCCTCGCATTTCCTCGAACGCGCGCGCA
GCCCAATCCCGTGCTTTTGCGCACGCAGCACCCTCACACCCCCGCGTTCCGGCCCCCGCAGATC
TAGCCTCTCCGGGGTTTTAAAGCCCATTTCAGAGGCGCGGAGCCCCAGGCTGGGAAGGTTTGGG
TAGCATCGTGGGCGGAGGTTCCAGCTCCAAGCTTGGCTGATCCATCTCACGTTCCGAGTGAAAC
CAGGAAACGACCGGGGGCCCAGGTGGCTTTCCGCTCCGAGGTGGGGGGCCGCGACCTGAAGTTT
TCCGTCCACTCTGTGGCGGCTCTCCAGCTCCCCTCCACCTCCTCCCACCGTGGACGCCCTCAGA
TTGAGTTGGAGAGGGGGGACCCCGGTGTGGTGTCCTGGGAAAGCTTGGAAAGGGGGACCTTGCA
GAGACACCCACCACCTCCTCCTGCGTCCCCGGGGCTGCTGAATCACCGGCGAGGAGTCTGCAGG
TGCTTGAATGAGCCCGACACCAGCCTCTGCCCCTGGGTGCCCGACGTAACAACAAGGATCCCAC
TGGTCGCCCCTGGCATGCCCCACCAGCCTTCACCCTGAGTTGGCAGCCCCCACCCCTGCCAGCC
GTCACCCTGCATTGTTCCGGCTCCCCCGAAGTCCCCACGCTGCAGTGCGGCCAAGACCCCTCCC
CACGGGGGCCACCCCCACCAAGTGCCCCTGGTGCCCGGGGTGGCCCGGCCCGTCGGGCCATGAA
GCTGCAGGCAGTGATGGAGACTCTTATTCAGAGGCAACAGCGAGCCCGGCAGGAACTGGAGGCT
CGACAGCCTCCACTACCCCCACCACCGGAGCCCGCTGGTGTCCAGGCTCGGACCACCATGACAG
ATGAGGACAGGGAGCCTGAGAATGCCCGTATGCATAGGACGCAGATGGCTGCACTGGCTGCCAT
GCGGGCTGCTGCCGCCGGCTTGAGACATCCGTCCTCTCCCGGGGGCTCGGAGGACGAAGACACA
GCCCAGGGAGGGACTCTGAGTTCACCTGCCCTGCATGGAAGTGGCCAGGAGGGACCGGGACACA
CTGAGGGAGACGGCCATTTGATGGACATGGGCTCCGATGATGACACGAAGCCCAAGTGGGAAGA
ACAAGAGCTGGAAGAACTGGGGGAAGAGGAAGAGGAGGAGGATGAAGATGACTTTGAGGAAGAA
GAGGAGGATGAGGAGGAAGAAGGCCTGGGCCTCCCAGAGTCTGCCAGCCTGGGCTCCGCAGGCC
TGTTTACCCGCAAGGCCCCACCTACTCAGACCTTCCGTGGAGACGGTGGTCCCAGAATGCTCAG
TGGCCCTGAGCGCCTGGGACCTGGCCCGGCCCACCCCAGTCATGTGGCGTCCCAGATGCCACCA
CCGGACCATGGGGACTGGACATTTGAGGAGCAGTTCAAACAGCTCTATGAACTGGACGCAGACC
CCAAGAGGAAAGAGTTCCTGGACGACCTGTTCAGCTTCATGCAGAAGCGGGGCACTCCGGTGAA
CCGGATCCCCATCATGGCCAAGCAGGTCCTCGACCTGTTCATGCTGTATGTGCTGGTGACGGAA
AAGGGCGGTCTGGTAGAGGTTATCAACAAGAAGCTGTGGAGGGAGATCACCAAGGGGCTCAACC
TGCCCACCTCCATCACCAGTGCTGCCTTCACACTTCGGACACAGTACATGAAGTATCTTTACCC
CTATGAGTGTGAGAGGCGAGGCCTGAGCAGCCCCAATGAGCTCCAGGCTGCCATAGACAGCAAC
CGCCGGGAGGGCAGGCGCCAGAGCTTCGGGGGCTCCCTCTTTGCTTACTCACCCAGTGGAGCCC
ACAGCATGCTGTCCTCACCCAAGCTACCGGTGACTTCTTTGGGCCTTGCTGCCAGCACCAATGG
CAGCTCTATCACCCCAACACCCAAGATCAAGAAAGAGGAAGACTCAGCCATCCCCATCACAGTC
CCAGGCCGCCTACCCGTGTCTCTGGCAGGCCACCCTGTCGTAGCAGCCCAGGCAGCGGCTGTGC
AAGCCGCAGCAGCCCAGGCTGCAGTTGCGGCCCAGGCAGCCGCCCTGGAACAACTCCGGGAGAA
GCTGGAATCCACGGAGCCTCCGGAAAAGAAGATGGCCCTGGTTGCAGATGAGCAGCAGCGTCTC
ATGCAGCGAGCCGTGCAGCAGAGCTTCCTGGCCATGACAGCCCAGCTGCCCATGAACATCCGGA
TCAACAGCCAAGCCTCTGAGAGTCGCCAGGACCCAGCTGTAAATCTCACCAGTGCCAATGGCAG
CAACAGTATTAGCATGTCCGTGGAGATGAACGGTATTGTATACACAGGGGTGCTGTTCGCTCAG
CCACCACCTCCTACGCCACCTCCCGCCTCCAGCAAAGGTGGTGTGAGCAGCATTGGTACCAACA
ACACCATGGGTAACCGGACAGGAGCCAGTGGCAGTGCTGGCAGCAGCGGCCAAGTGGGGCTGGC
TGGGGTGTCTGCACCCACCATGTCTTCTACCTCAAATAACTCCTTGCCTTAAAAGGAAACCAAG
TTGCATGGCTGCCCACCCGCCACAGGAACCACATGGCCACACAGGGGGACCTGGGACGTCAGAA
GAATCCCAGTGGGCTGGGCAGATTCCCAAGGAGCCACACTGACGCCAAAAAGGAGAGAGAGAGA
TAGAGAGAGAAAGAGAGAGAGAGAAAATATATATATATACATATATATATATACATATAGAAAG
AGATAGGTAGATGGAGAAACAGATCTAATAAATCAGGGCAAAGCAAAGAACACTTGAATCTCTC
AGGTTTCGGAGACTCCGAGAAACGGATTTGACGAGGGCCACCAGGGCAACGTCAAAGCCTAAGG
AGGCCACCTTTCCAGAGGCTTCCGTGGGGGTTCGGCGTGACCAGCCTCATTTAAGCACGTCTGT
TTACCTCATGAATCCGGGCACCGCGTGTTCATACCGTTTTGTTTTTGTTTCCTTTTTTTTTGTT
TGTTTGTTTGGGTTTTTTTTTTCCTTTTTGTTATTGTCGTCGTTGTTCCTTGGTCTTTAACCAT
GGTTCCTTTCGAGAAAACCAACCTTGGAAGCTATGAATTTTTTTCTTTTTAAAACAAGATCTCC
ACATTCAGACACATTTTTTTTAAGGTAGGGGGGGTTCTGATTTTGTAAATATTCTATTTTATTC
TTGAGGGCAGGGATTGGATCTTAGGAAGAGTCTATCTGTATATCTATATATTTGTGTTCATTCA
GGGAAACAGACTTTAAAAAAAAAAAGAAGCAAAATACCAGCCATGTCGGTCCCTACCCTCGTCA
CCCCAGAGCCCCTACTTGTCCTCTGATATCCTGCGGTGCCCCTGGCTCAGCTAGGAGATGCTGG
CTTTCAGCAGTTTCCACAGTTCTGTCAGACTGGCCCCACCCACTGGCTCTCATCATTCAGGAAC
CTGGATTGCTTACCCAGGACACAGAATGCTCTAGAAACCGGTAGCGGAGCACAGGGAATACAAT
GTCCTCAGGTGTCTCAGGGATGAAGGTCTGCATTCTCCTTGCCTGGATGGGTTGCAGAGGCAAC
AGGCTTAGCTCAGGGCAAGGAATCGGGCTTGAGTCACTGCCTCCTGTGTTCCAACTCTCTTCCT
GTCTTTGTCAACCCCCTTGCTGGGACAGGACCTGAATGTGACAGTGATCAGCCAGGAAGGGCCC
TGCTGTCTCTTAAGGAGGATGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGTGAGTTT
GTTTGTTCAAGGTCATCCCTGGCTACACATGGAGGTTGAGGCCAGCCTGAGCTACTTGAAACCC
TGTGGCGCATACCTTTAATCCCAGCACTGAGTGGACCAGCCCGGTCTTACAGTTAATTCCAAGC
TGCCCAGATTACACAGTGAGAGCCTGTCCAAAAAAAGCTTTCATTTCATTTTGGCTGGAGCTGC
ATGCATACTCTCTGCTGGATTGGGGAACCAGTCCTGGACTCAGCCTGGCCTCCTTTGGCAACCG
GGCAGCGCTGGGTTTTCCTGGGCTAGGGTTGGAGCTTGTGCAGAGAGCTGGGAGCTGGAACCTG
CTTGGCCCTCAGCCCCAGGAGTCATGAAGCCTTGAGTTTGTTGTGGGGACTGGACCCTCTTTCA
TCCTCTGTCTCAGGTTATCAACACACCCCTCCTGTCCTTCCAGGAGGGGGTGCTGCCCATTTGG
AGGGGAGGAGGATCTCAACTTTTCCTTCTGGAAGCTTCTGCTTGCCCCTTTTTGGGGCCACTGT
CTTAGCCGCACAATCATTCCTGGTCACGGGTGTTGAGGGGTCCTTGTTCCCTTCTGACAACCCT
GTCCAAAGTCCGCCTCCATGGGTAACCGGCTCAGGGATGTAGCAGCCAGCCTCCCGTCTCCCTA
GTGGGGTCTATCTGAGGGGGGGTCGCCTTGGTGGGCACATCCAAGGCAAATTTCTTTCTACCTC
AGGTTTTTTGATGCCAAAAAGAAAAAAAAAATGCACCCGGGCCACCCACTTCTCTGGTCACCTT
CCCAATGCCCAACAGTGGGAACTTGGTGTCCTGGTGTCCACTTGTCTCTCAGGCTCTGTGAGTG
GCGGAAAGCACCAGATCCTAACTCAGGGGACTTGCCTATCACAGCTCTGTGATTGTAGTTGGGG
GGGTGCCCTCTGCTGGACATACTCAGCCACCCTCCATGGTCCTATCTGCCTCAGTTGCCCCATT
AACCCTTGGCGTGGGTTCCAGTTGGCACTCACACAGACTGGGAGTGGGGACAGAGCTGGGGTCA
TCACTGTCCACCTGGCACCTCAGGGCTTGGCGTGGGGCAGGTGAGACACCCAAACTCAGGGCAA
AGGGTGGAAGGGCAGGCACAGTCTGCTTCTAGAACCTTCCTGGTAGCCCTTATGCTGGCCACCA
GGCCACGTGTGTGTGTGTCTATGTGTCAGGCTGCAGTGGGTGGGTGGGGTGGGGCTTGGGGACA
GCTGGGTTAATGTTTTCTGAGGGTTAATGCGTCTGTACAGTCTTTATTTCTTTCATTTTAATCA
TTTTTACCCACTTTTCCCCCACCCCCACATAATTTTGGCTTTTGTGGATTTTATTTTTCCTTCT
GAGTAAATGTGAGCTGAGCTGCTTTGTTAGCAATGTGTGAACTTTTCAGTTTCTTGGGGGTGGG
GGGGGGCTTGTCCGACAGCGTGGGGATCACACAGAAACTCAGGTAAAATTAAAAAAAAAAAGTG
GATTAAAAAAAAAAAGAAAAGAAAAAAACTGTTTTCTACCTCTGGTCAGGCCTCTGTGGCCAGT
TCCCGCCTAGGCTGTGGCCTGCAATGGTCACAGTTGTGCCGAATACTCAGGAAAATCCAGCTAT
TAACAGAAAAACTCAAACAGACAACAATGGGGAGGAAAGGTGTGATTTTTGAAATTAAAAAAAA
AAAAACACTGAAAGTTTACATTTTATGATCTTATTGTGGATTGTATTTAAACCTCAAAAATATT
TAACGGGATTGTAACCGTGTAAATCCGTGATATTAAAGCGTTGAGACACTTCTGAGAAAGA

hide sequence

RefSeq Acc Id:

XM_039078974 ⟹ XP_038934902

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	9,755,542 - 9,778,907 (-)	NCBI

RefSeq Acc Id:

XM_039078976 ⟹ XP_038934904

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	9,755,542 - 9,778,907 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101536	(Get FASTA)	NCBI Sequence Viewer
	XP_006240964	(Get FASTA)	NCBI Sequence Viewer
	XP_006240966	(Get FASTA)	NCBI Sequence Viewer
	XP_006240967	(Get FASTA)	NCBI Sequence Viewer
	XP_008763391	(Get FASTA)	NCBI Sequence Viewer
	XP_017450301	(Get FASTA)	NCBI Sequence Viewer
	XP_038934902	(Get FASTA)	NCBI Sequence Viewer
	XP_038934904	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68846	(Get FASTA)	NCBI Sequence Viewer
	EDL89366	(Get FASTA)	NCBI Sequence Viewer
	EDL89367	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001101536 ⟸ NM_001108066

- UniProtKB:

B5DEX9 (UniProtKB/TrEMBL), E9PTY2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKLQAVMETLIQRQQRARQELEARQPPLPPPPEPAGVQARTTMTDEDREPENARMHRTQMAALA
AMRAAAAGLRHPSSPGGSEDEDTAQGGTLSSPALHGSGQEGPGHTEGDGHLMDMGSDDDTKPKW
EEQELEELGEEEEEEDEDDFEEEEEDEEEEGLGLPESASLGSAGLFTRKAPPTQTFRGDGGPRM
LSGPERLGPGPAHPSHVASQMPPPDHGDWTFEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTP
VNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYL
YPYECERRGLSSPNELQAAIDSNRREGRRQSFGGSLFAYSPSGAHSMLSSPKLPVTSLGLAAST
NGSSITPTPKIKKEEDSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLR
EKLESTEPPEKKMALVADEQQRLMQRAVQQSFLAMTAQLPMNIRINSQASESRQDPAVNLTSAN
GSNSISMSVEMNGIVYTGVLFAQPPPPTPPPASSKGGVSSIGTNNTMGNRTGASGSAGSSGQVG
LAGVSAPTMSSTSNNSLP

hide sequence

RefSeq Acc Id:	XP_006240967 ⟸ XM_006240905
- Peptide Label:	isoform X1
- UniProtKB:	B5DEX9 (UniProtKB/TrEMBL), E9PTY2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLQAVMETLIQRQQRARQELEARQPPLPPPPEPAGVQARTTMTDEDREPENARMHRTQMAALA AMRAAAAGLRHPSSPGGSEDEDTAQGGTLSSPALHGSGQEGPGHTEGDGHLMDMGSDDDTKPKW EEQELEELGEEEEEEDEDDFEEEEEDEEEEGLGLPESASLGSAGLFTRKAPPTQTFRGDGGPRM LSGPERLGPGPAHPSHVASQMPPPDHGDWTFEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTP VNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYL YPYECERRGLSSPNELQAAIDSNRREGRRQSFGGSLFAYSPSGAHSMLSSPKLPVTSLGLAAST NGSSITPTPKIKKEEDSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLR EKLESTEPPEKKMALVADEQQRLMQRAVQQSFLAMTAQLPMNIRINSQASESRQDPAVNLTSAN GSNSISMSVEMNGIVYTGVLFAQPPPPTPPPASSKGGVSSIGTNNTMGNRTGASGSAGSSGQVG LAGVSAPTMSSTSNNSLP hide sequence

RefSeq Acc Id:	XP_006240966 ⟸ XM_006240904
- Peptide Label:	isoform X1
- UniProtKB:	B5DEX9 (UniProtKB/TrEMBL), E9PTY2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLQAVMETLIQRQQRARQELEARQPPLPPPPEPAGVQARTTMTDEDREPENARMHRTQMAALA AMRAAAAGLRHPSSPGGSEDEDTAQGGTLSSPALHGSGQEGPGHTEGDGHLMDMGSDDDTKPKW EEQELEELGEEEEEEDEDDFEEEEEDEEEEGLGLPESASLGSAGLFTRKAPPTQTFRGDGGPRM LSGPERLGPGPAHPSHVASQMPPPDHGDWTFEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTP VNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYL YPYECERRGLSSPNELQAAIDSNRREGRRQSFGGSLFAYSPSGAHSMLSSPKLPVTSLGLAAST NGSSITPTPKIKKEEDSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLR EKLESTEPPEKKMALVADEQQRLMQRAVQQSFLAMTAQLPMNIRINSQASESRQDPAVNLTSAN GSNSISMSVEMNGIVYTGVLFAQPPPPTPPPASSKGGVSSIGTNNTMGNRTGASGSAGSSGQVG LAGVSAPTMSSTSNNSLP hide sequence

RefSeq Acc Id:	XP_006240964 ⟸ XM_006240902
- Peptide Label:	isoform X1
- UniProtKB:	B5DEX9 (UniProtKB/TrEMBL), E9PTY2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLQAVMETLIQRQQRARQELEARQPPLPPPPEPAGVQARTTMTDEDREPENARMHRTQMAALA AMRAAAAGLRHPSSPGGSEDEDTAQGGTLSSPALHGSGQEGPGHTEGDGHLMDMGSDDDTKPKW EEQELEELGEEEEEEDEDDFEEEEEDEEEEGLGLPESASLGSAGLFTRKAPPTQTFRGDGGPRM LSGPERLGPGPAHPSHVASQMPPPDHGDWTFEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTP VNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYL YPYECERRGLSSPNELQAAIDSNRREGRRQSFGGSLFAYSPSGAHSMLSSPKLPVTSLGLAAST NGSSITPTPKIKKEEDSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLR EKLESTEPPEKKMALVADEQQRLMQRAVQQSFLAMTAQLPMNIRINSQASESRQDPAVNLTSAN GSNSISMSVEMNGIVYTGVLFAQPPPPTPPPASSKGGVSSIGTNNTMGNRTGASGSAGSSGQVG LAGVSAPTMSSTSNNSLP hide sequence

RefSeq Acc Id:	XP_008763391 ⟸ XM_008765169
- Peptide Label:	isoform X1
- UniProtKB:	B5DEX9 (UniProtKB/TrEMBL), E9PTY2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLQAVMETLIQRQQRARQELEARQPPLPPPPEPAGVQARTTMTDEDREPENARMHRTQMAALA AMRAAAAGLRHPSSPGGSEDEDTAQGGTLSSPALHGSGQEGPGHTEGDGHLMDMGSDDDTKPKW EEQELEELGEEEEEEDEDDFEEEEEDEEEEGLGLPESASLGSAGLFTRKAPPTQTFRGDGGPRM LSGPERLGPGPAHPSHVASQMPPPDHGDWTFEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTP VNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYL YPYECERRGLSSPNELQAAIDSNRREGRRQSFGGSLFAYSPSGAHSMLSSPKLPVTSLGLAAST NGSSITPTPKIKKEEDSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLR EKLESTEPPEKKMALVADEQQRLMQRAVQQSFLAMTAQLPMNIRINSQASESRQDPAVNLTSAN GSNSISMSVEMNGIVYTGVLFAQPPPPTPPPASSKGGVSSIGTNNTMGNRTGASGSAGSSGQVG LAGVSAPTMSSTSNNSLP hide sequence

RefSeq Acc Id:	XP_017450301 ⟸ XM_017594812
- Peptide Label:	isoform X1
- UniProtKB:	B5DEX9 (UniProtKB/TrEMBL), E9PTY2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLQAVMETLIQRQQRARQELEARQPPLPPPPEPAGVQARTTMTDEDREPENARMHRTQMAALA AMRAAAAGLRHPSSPGGSEDEDTAQGGTLSSPALHGSGQEGPGHTEGDGHLMDMGSDDDTKPKW EEQELEELGEEEEEEDEDDFEEEEEDEEEEGLGLPESASLGSAGLFTRKAPPTQTFRGDGGPRM LSGPERLGPGPAHPSHVASQMPPPDHGDWTFEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTP VNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYL YPYECERRGLSSPNELQAAIDSNRREGRRQSFGGSLFAYSPSGAHSMLSSPKLPVTSLGLAAST NGSSITPTPKIKKEEDSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLR EKLESTEPPEKKMALVADEQQRLMQRAVQQSFLAMTAQLPMNIRINSQASESRQDPAVNLTSAN GSNSISMSVEMNGIVYTGVLFAQPPPPTPPPASSKGGVSSIGTNNTMGNRTGASGSAGSSGQVG LAGVSAPTMSSTSNNSLP hide sequence

RefSeq Acc Id:

ENSRNOP00000073120 ⟸ ENSRNOT00000089009

RefSeq Acc Id:

ENSRNOP00000026708 ⟸ ENSRNOT00000026708

RefSeq Acc Id:

ENSRNOP00000076345 ⟸ ENSRNOT00000093489

RefSeq Acc Id:	XP_038934902 ⟸ XM_039078974
- Peptide Label:	isoform X1
- UniProtKB:	E9PTY2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038934904 ⟸ XM_039078976
- Peptide Label:	isoform X1
- UniProtKB:	E9PTY2 (UniProtKB/TrEMBL)

Protein Domains

ARID REKLES

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B5DEX9-F1-model_v2	AlphaFold	B5DEX9	1-594	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305299	AgrOrtholog
BioCyc Gene	G2FUF-34902	BioCyc
Ensembl Genes	ENSRNOG00000026435	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000026708	ENTREZGENE
	ENSRNOP00000026708.6	UniProtKB/TrEMBL
	ENSRNOP00000076345.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000026708	ENTREZGENE
	ENSRNOT00000026708.8	UniProtKB/TrEMBL
	ENSRNOT00000093489.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.60	UniProtKB/TrEMBL
InterPro	ARI3A/B/C	UniProtKB/TrEMBL
	ARID/BRIGHT_DNA-bd	UniProtKB/TrEMBL
	ARID_dom_sf	UniProtKB/TrEMBL
	REKLES_domain	UniProtKB/TrEMBL
KEGG Report	rno:314616	UniProtKB/TrEMBL
NCBI Gene	314616	ENTREZGENE
PANTHER	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 3A	UniProtKB/TrEMBL
	PTHR15348	UniProtKB/TrEMBL
Pfam	ARID	UniProtKB/TrEMBL
PhenoGen	Arid3a	PhenoGen
PROSITE	ARID	UniProtKB/TrEMBL
	REKLES	UniProtKB/TrEMBL
SMART	ARID	UniProtKB/TrEMBL
	BRIGHT	UniProtKB/TrEMBL
Superfamily-SCOP	ARID	UniProtKB/TrEMBL
UniProt	A0A1W2Q6P0_RAT	UniProtKB/TrEMBL
	B5DEX9	ENTREZGENE, UniProtKB/TrEMBL
	E9PTY2	ENTREZGENE
UniProt Secondary	E9PTY2	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-25	Arid3a	AT-rich interaction domain 3A	Arid3a	AT rich interactive domain 3A (Bright like)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Arid3a	AT rich interactive domain 3A (Bright like)	Arid3a_predicted	AT rich interactive domain 3A (Bright like) (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Arid3a_predicted	AT rich interactive domain 3A (Bright like) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD