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Gene: Slc39a1 (solute carrier family 39 member 1) Rattus norvegicus
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Symbol: Slc39a1
Name: solute carrier family 39 member 1
Description: Exhibits signaling receptor binding activity. Predicted to be involved in chordate embryonic development; limb development; and zinc ion transmembrane transport. Predicted to localize to the plasma membrane. Orthologous to human SLC39A1 (solute carrier family 39 member 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; aldosterone.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC361986; solute carrier family 39 (zinc transporter), member 1; zinc transporter ZIP1
Orthologs:
Homo sapiens (human) : SLC39A1 (solute carrier family 39 member 1)  HGNC  Alliance
Mus musculus (house mouse) : Slc39a1 (solute carrier family 39 (zinc transporter), member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc39a1 (solute carrier family 39 member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC39A1 (solute carrier family 39 member 1)
Canis lupus familiaris (dog) : SLC39A1 (solute carrier family 39 member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc39a1 (solute carrier family 39 member 1)
Sus scrofa (pig) : SLC39A1 (solute carrier family 39 member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02189,609,766 - 189,615,367 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02209,042,625 - 209,048,222 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42182,490,501 - 182,496,068 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12182,440,596 - 182,445,640 (+)NCBI
Celera2169,638,848 - 169,644,414 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Slc39a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305241
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.