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Gene: Als2cl (ALS2 C-terminal like) Rattus norvegicus
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Symbol: Als2cl
Name: ALS2 C-terminal like
Description: Predicted to have Rab GTPase binding activity and identical protein binding activity. Predicted to be involved in endosome organization and protein localization. Predicted to localize to the cytoplasmic vesicle. Orthologous to human ALS2CL (ALS2 C-terminal like); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: MODEL
Also known as: ALS2 C-terminal-like protein; LOC316017; RGD1305208; similar to RN49018
Orthologs:
Homo sapiens (human) : ALS2CL (ALS2 C-terminal like)  HGNC  Alliance
Mus musculus (house mouse) : Als2cl (ALS2 C-terminal like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Als2cl (ALS2 C-terminal like)
Pan paniscus (bonobo/pygmy chimpanzee) : ALS2CL (ALS2 C-terminal like)
Canis lupus familiaris (dog) : ALS2CL (ALS2 C-terminal like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Als2cl (ALS2 C-terminal like)
Sus scrofa (pig) : ALS2CL (ALS2 C-terminal like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08119,156,081 - 119,176,680 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8119,160,731 - 119,174,830 (+)Ensembl
Rnor_5.08118,494,443 - 118,515,055 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48115,269,448 - 115,287,976 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18115,288,197 - 115,306,337 (+)NCBI
Celera8110,146,276 - 110,166,876 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Als2cl
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305208
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.