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Gene: Ubap1 (ubiquitin-associated protein 1) Rattus norvegicus
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Symbol: Ubap1
Name: ubiquitin-associated protein 1
Description: Predicted to have ubiquitin binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway. Predicted to localize to several cellular components, including the ESCRT I complex; cytosol; and plasma membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia. Orthologous to human UBAP1 (ubiquitin associated protein 1); INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362502; UBAP; UBAP-1
Orthologs:
Homo sapiens (human) : UBAP1 (ubiquitin associated protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Ubap1 (ubiquitin-associated protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ubap1 (ubiquitin associated protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : UBAP1 (ubiquitin associated protein 1)
Canis lupus familiaris (dog) : UBAP1 (ubiquitin associated protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ubap1 (ubiquitin associated protein 1)
Sus scrofa (pig) : UBAP1 (ubiquitin associated protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0557,738,309 - 57,778,724 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl557,738,321 - 57,778,723 (+)Ensembl
Rnor_5.0562,265,514 - 62,306,295 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4558,779,328 - 58,820,027 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1558,779,506 - 58,820,205 (+)NCBI
Celera555,116,876 - 55,157,143 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ubap1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305186
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.