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Gene: Gtf3c5 (general transcription factor IIIC subunit 5) Rattus norvegicus
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Symbol: Gtf3c5
Name: general transcription factor IIIC subunit 5
Description: Predicted to contribute to RNA polymerase III general transcription initiation factor activity; RNA polymerase III transcription regulator recruiting activity; and polymerase III regulatory region sequence-specific DNA binding activity. Predicted to be involved in skeletal muscle cell differentiation. Predicted to localize to the nucleoplasm and transcription factor TFIIIC complex. Orthologous to human GTF3C5 (general transcription factor IIIC subunit 5); PARTICIPATES IN RNA polymerase III transcription pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: general transcription factor 3C polypeptide 5; general transcription factor IIIC, polypeptide 5; LOC362095
Orthologs:
Homo sapiens (human) : GTF3C5 (general transcription factor IIIC subunit 5)  HGNC  Alliance
Mus musculus (house mouse) : Gtf3c5 (general transcription factor IIIC, polypeptide 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gtf3c5 (general transcription factor IIIC subunit 5)
Pan paniscus (bonobo/pygmy chimpanzee) : GTF3C5 (general transcription factor IIIC subunit 5)
Canis lupus familiaris (dog) : GTF3C5 (general transcription factor IIIC subunit 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gtf3c5 (general transcription factor IIIC subunit 5)
Sus scrofa (pig) : GTF3C5 (general transcription factor IIIC subunit 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.037,144,354 - 7,164,678 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl37,144,250 - 7,164,654 (-)Ensembl
Rnor_5.0312,495,477 - 12,515,794 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.437,552,088 - 7,572,394 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.137,553,773 - 7,572,450 (-)NCBI
Celera36,675,056 - 6,695,359 (-)NCBICelera
Cytogenetic Map3p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gtf3c5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305173
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.