Emc7 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 119,714,617 - 119,728,748 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 99,263,933 - 99,274,365 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 99,263,980 - 99,274,360 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 102,890,951 - 102,901,259 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 111,489,947 - 111,500,255 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 109,186,464 - 109,196,800 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 103,945,276 - 103,955,970 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 103,945,329 - 103,956,007 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 110,539,143 - 110,549,811 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 98,305,981 - 98,316,324 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 98,202,384 - 98,212,751 (+) | NCBI | | | | | Celera | 3 | 98,249,397 - 98,259,736 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q35 | NCBI | | | | |
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EMC7 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 15 | 34,084,017 - 34,101,862 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 34,084,017 - 34,101,862 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 34,376,218 - 34,394,063 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 32,163,515 - 32,181,345 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 15 | 32,163,517 - 32,181,345 | NCBI | | | | | Celera | 15 | 11,178,721 - 11,196,565 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | q14 | NCBI | | | | | HuRef | 15 | 11,239,746 - 11,257,648 (-) | NCBI | | HuRef | | | CHM1_1 | 15 | 34,494,168 - 34,512,016 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 31,882,200 - 31,900,068 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Emc7 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 112,285,332 - 112,302,507 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 112,285,342 - 112,302,507 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 112,455,014 - 112,472,163 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 112,454,997 - 112,472,162 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 112,295,182 - 112,307,593 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 112,255,864 - 112,268,275 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 113,606,320 - 113,618,698 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | E3 | NCBI | | | | | cM Map | 2 | 57.02 | NCBI | | | | |
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Emc7 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955416 | 459,668 - 484,278 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955416 | 459,668 - 482,562 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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EMC7 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 16 | 22,866,537 - 22,884,605 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 27,588,295 - 27,608,565 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 12,593,498 - 12,611,409 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 31,428,591 - 31,446,290 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 31,428,591 - 31,446,290 (-) | Ensembl | panpan1.1 | | panPan2 | |
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EMC7 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 30 | 952,354 - 965,924 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 952,386 - 978,051 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 996,998 - 1,010,580 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 1,050,229 - 1,063,820 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 1,050,264 - 1,075,950 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 30 | 996,949 - 1,010,532 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 1,096,000 - 1,109,590 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 1,223,592 - 1,237,183 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Emc7 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 79,510,865 - 79,526,939 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936673 | 2,622,472 - 2,641,266 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936673 | 2,624,900 - 2,640,973 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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EMC7 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 80,391,189 - 80,446,528 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 80,391,198 - 80,408,340 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 86,384,401 - 86,401,614 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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EMC7 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 26 | 48,804,520 - 48,822,904 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 26 | 48,804,573 - 48,825,820 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 92,082,753 - 92,101,088 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Emc7 (Heterocephalus glaber - naked mole-rat) |
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