Gene: Phf20 (PHD finger protein 20) Rattus norvegicus
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Symbol: Phf20
Name: PHD finger protein 20
Description: ENCODES a protein that exhibits histone acetyltransferase activity (H4-K16 specific) (ortholog); histone acetyltransferase activity (H4-K5 specific) (ortholog); histone acetyltransferase activity (H4-K8 specific) (ortholog); INVOLVED IN histone H4-K16 acetylation (ortholog); histone H4-K5 acetylation (ortholog); histone H4-K8 acetylation (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN cytosol (ortholog); histone acetyltransferase complex (ortholog); MLL1 complex (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide
AGR Description: Predicted to contribute to histone acetyltransferase activity (H4-K16 specific), histone acetyltransferase activity (H4-K5 specific), and histone acetyltransferase activity (H4-K8 specific); predicted to be involved in histone H4-K16 acetylation, histone H4-K5 acetylation, and histone H4-K8 acetylation; predicted to localize to the cytosol and intracellular organelle; orthologous to human PHF20 (PHD finger protein 20).
Merged Description: Predicted to contribute to histone acetyltransferase activity (H4-K16 specific), histone acetyltransferase activity (H4-K5 specific), and histone acetyltransferase activity (H4-K8 specific); predicted to be involved in histone H4-K16 acetylation, histone H4-K5 acetylation, and histone H4-K8 acetylation; predicted to localize to the cytosol and intracellular organelle; orthologous to human PHF20 (PHD finger protein 20); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC311575; LOC311575; RGD1305020; similar to Hepatocellular carcinoma-associated antigen 58 homolog
Orthologs:
Homo sapiens (human) : PHF20 (PHD finger protein 20)  HGNC  Alliance
Mus musculus (house mouse) : Phf20 (PHD finger protein 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Phf20 (PHD finger protein 20)
Pan paniscus (bonobo/pygmy chimpanzee) : PHF20 (PHD finger protein 20)
Canis lupus familiaris (dog) : PHF20 (PHD finger protein 20)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Phf20 (PHD finger protein 20)
Sus scrofa (pig) : PHF20 (PHD finger protein 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03152,273,269 - 152,379,742 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03159,311,039 - 159,417,512 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43146,601,763 - 146,707,185 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13146,529,026 - 146,611,653 (+)NCBI
Celera3143,432,023 - 143,537,366 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Phf20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305020
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.