Cryzl2 (crystallin zeta like 2) - Rat Genome Database

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Gene: Cryzl2 (crystallin zeta like 2) Rattus norvegicus
Analyze
Symbol: Cryzl2
Name: crystallin zeta like 2
RGD ID: 1304982
Description: Predicted to enable oxidoreductase activity. Orthologous to human CRYZL2P (crystallin zeta like 2, pseudogene); INTERACTS WITH (1->4)-beta-D-glucan (ortholog); 17beta-estradiol (ortholog); aristolochic acid A (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC289138; quinone oxidoreductase-like protein 2; RGD1304982; similar to RIKEN cDNA 2810025M15; Tp53i3; tumor protein p53 inducible protein 3
RGD Orthologs
Human
Mouse
Dog
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81372,146,147 - 72,210,258 (+)NCBIGRCr8
mRatBN7.21369,612,605 - 69,655,018 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1369,620,792 - 69,652,475 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1372,188,087 - 72,222,121 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01373,502,811 - 73,536,882 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01370,764,300 - 70,798,375 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01375,101,759 - 75,145,967 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1375,105,615 - 75,143,441 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01380,021,276 - 80,062,430 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41372,724,644 - 72,756,267 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11372,687,354 - 72,770,280 (+)NCBI
Celera1369,451,486 - 69,481,415 (+)NCBICelera
Cytogenetic Map13q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:19349281   PMID:23376485  


Genomics

Comparative Map Data
Cryzl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81372,146,147 - 72,210,258 (+)NCBIGRCr8
mRatBN7.21369,612,605 - 69,655,018 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1369,620,792 - 69,652,475 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1372,188,087 - 72,222,121 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01373,502,811 - 73,536,882 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01370,764,300 - 70,798,375 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01375,101,759 - 75,145,967 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1375,105,615 - 75,143,441 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01380,021,276 - 80,062,430 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41372,724,644 - 72,756,267 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11372,687,354 - 72,770,280 (+)NCBI
Celera1369,451,486 - 69,481,415 (+)NCBICelera
Cytogenetic Map13q22NCBI
CRYZL2P
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381178,006,136 - 178,038,007 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1178,006,133 - 178,037,999 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p14 Ensembl1178,008,081 - 178,037,946 (-)EnsemblGRCh38hg38GRCh38
GRCh371177,975,271 - 178,007,142 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361176,243,839 - 176,268,841 (-)NCBINCBI36Build 36hg18NCBI36
Celera1151,084,173 - 151,116,201 (-)NCBICelera
Cytogenetic Map1q25.2NCBI
HuRef1149,202,732 - 149,234,611 (-)NCBIHuRef
CHM1_11179,399,190 - 179,431,057 (-)NCBICHM1_1
T2T-CHM13v2.01177,360,910 - 177,392,778 (-)NCBIT2T-CHM13v2.0
Cryzl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391157,280,082 - 157,317,570 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1157,286,147 - 157,320,208 (+)EnsemblGRCm39 Ensembl
GRCm381157,455,718 - 157,490,000 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1157,458,577 - 157,492,638 (+)EnsemblGRCm38mm10GRCm38
MGSCv371159,388,713 - 159,418,864 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361159,295,259 - 159,325,410 (+)NCBIMGSCv36mm8
Celera1159,867,795 - 159,899,371 (+)NCBICelera
Cytogenetic Map1H1NCBI
cM Map167.99NCBI
LOC610994
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1721,639,033 - 21,665,469 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha721,166,140 - 21,192,221 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0721,379,183 - 21,405,396 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1721,285,447 - 21,311,862 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0721,393,335 - 21,419,492 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0721,529,056 - 21,555,320 (+)NCBIUU_Cfam_GSD_1.0

Variants

.
Variants in Cryzl2
337 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:236
Count of miRNA genes:157
Interacting mature miRNAs:178
Transcripts:ENSRNOT00000006924
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133466346187525369Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)136906051977046890Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)136906051986800898Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)136906051986800898Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)136906051986800898Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
2303028Bp329Blood pressure QTL 329arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)135849787273485113Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)135949252277046890Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1366451204106807694Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat

Markers in Region
BM385036  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21369,622,041 - 69,622,200 (+)MAPPERmRatBN7.2
Rnor_6.01375,113,023 - 75,113,181NCBIRnor6.0
Rnor_5.01380,030,673 - 80,030,831UniSTSRnor5.0
RGSC_v3.41372,725,758 - 72,725,916UniSTSRGSC3.4
Celera1369,452,600 - 69,452,758UniSTS
RH 3.4 Map13408.7UniSTS
Cytogenetic Map13q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001401440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008769617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008769618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008769619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008769620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008769621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005492221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC158771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000006924   ⟹   ENSRNOP00000006924
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1369,620,792 - 69,652,475 (+)Ensembl
Rnor_6.0 Ensembl1375,111,778 - 75,143,441 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000076653   ⟹   ENSRNOP00000068232
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1369,620,792 - 69,651,994 (+)Ensembl
Rnor_6.0 Ensembl1375,105,615 - 75,124,344 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000100806   ⟹   ENSRNOP00000097423
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1369,620,792 - 69,651,950 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000116185   ⟹   ENSRNOP00000079255
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1369,623,954 - 69,652,475 (+)Ensembl
RefSeq Acc Id: NM_001401440   ⟹   NP_001388369
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,154,329 - 72,188,560 (+)NCBI
mRatBN7.21369,620,778 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090474   ⟹   XP_038946402
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,146,183 - 72,186,343 (+)NCBI
mRatBN7.21369,612,727 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090475   ⟹   XP_038946403
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,154,241 - 72,186,343 (+)NCBI
mRatBN7.21369,620,677 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090476   ⟹   XP_038946404
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,146,282 - 72,186,343 (+)NCBI
mRatBN7.21369,612,727 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090477   ⟹   XP_038946405
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,154,241 - 72,186,343 (+)NCBI
mRatBN7.21369,620,675 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090478   ⟹   XP_038946406
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,154,370 - 72,186,343 (+)NCBI
mRatBN7.21369,620,819 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090480   ⟹   XP_038946408
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,146,147 - 72,186,343 (+)NCBI
mRatBN7.21369,612,605 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090481   ⟹   XP_038946409
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,146,282 - 72,186,343 (+)NCBI
mRatBN7.21369,612,727 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090482   ⟹   XP_038946410
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,151,456 - 72,186,343 (+)NCBI
mRatBN7.21369,615,350 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090483   ⟹   XP_038946411
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,148,153 - 72,186,343 (+)NCBI
mRatBN7.21369,614,600 - 69,655,018 (+)NCBI
RefSeq Acc Id: XM_039090484   ⟹   XP_038946412
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,154,144 - 72,166,947 (+)NCBI
mRatBN7.21369,620,621 - 69,633,405 (+)NCBI
RefSeq Acc Id: XR_005492221
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81372,154,144 - 72,210,258 (+)NCBI
mRatBN7.21369,620,679 - 69,655,018 (+)NCBI
Ensembl Acc Id: ENSRNOP00000006924   ⟸   ENSRNOT00000006924
Ensembl Acc Id: ENSRNOP00000068232   ⟸   ENSRNOT00000076653
RefSeq Acc Id: XP_038946408   ⟸   XM_039090480
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038946402   ⟸   XM_039090474
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZMC2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946404   ⟸   XM_039090476
- Peptide Label: isoform X3
- UniProtKB: A6ID28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946409   ⟸   XM_039090481
- Peptide Label: isoform X7
- UniProtKB: A6ID28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946411   ⟸   XM_039090483
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038946410   ⟸   XM_039090482
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038946412   ⟸   XM_039090484
- Peptide Label: isoform X10
- UniProtKB: A0A8I6ASM8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946405   ⟸   XM_039090477
- Peptide Label: isoform X4
- UniProtKB: A6ID28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946403   ⟸   XM_039090475
- Peptide Label: isoform X2
- UniProtKB: A6ID28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946406   ⟸   XM_039090478
- Peptide Label: isoform X5
- UniProtKB: A6ID28 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000097423   ⟸   ENSRNOT00000100806
Ensembl Acc Id: ENSRNOP00000079255   ⟸   ENSRNOT00000116185
RefSeq Acc Id: NP_001388369   ⟸   NM_001401440
- UniProtKB: B0BNC9 (UniProtKB/Swiss-Prot),   A0A8I5ZMC2 (UniProtKB/TrEMBL)
Protein Domains
Enoyl reductase (ER)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B0BNC9-F1-model_v2 AlphaFold B0BNC9 1-350 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698931
Promoter ID:EPDNEW_R9446
Type:multiple initiation site
Name:Tp53i3_1
Description:tumor protein p53 inducible protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01375,111,765 - 75,111,825EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1304982 AgrOrtholog
BioCyc Gene G2FUF-17792 BioCyc
Ensembl Genes ENSRNOG00000005177 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000006924 ENTREZGENE
  ENSRNOT00000006924.8 UniProtKB/Swiss-Prot
  ENSRNOT00000100806 ENTREZGENE
  ENSRNOT00000147380 ENTREZGENE
  ENSRNOT00000147803 ENTREZGENE
Gene3D-CATH Medium-chain alcohol dehydrogenases, catalytic domain UniProtKB/Swiss-Prot
  NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7124147 IMAGE-MGC_LOAD
InterPro ADH_C UniProtKB/Swiss-Prot
  ADH_N UniProtKB/Swiss-Prot
  GroES-like_sf UniProtKB/Swiss-Prot
  NAD(P)-bd_dom_sf UniProtKB/Swiss-Prot
  PKS_ER UniProtKB/Swiss-Prot
  Zn-ADH-like_protein UniProtKB/Swiss-Prot
MGC_CLONE MGC:188074 IMAGE-MGC_LOAD
NCBI Gene 289138 ENTREZGENE
PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 2 UniProtKB/Swiss-Prot
  SHORT-CHAIN DEHYDROGENASE/REDUCTASE UniProtKB/Swiss-Prot
Pfam ADH_N UniProtKB/Swiss-Prot
  ADH_zinc_N UniProtKB/Swiss-Prot
PhenoGen Cryzl2 PhenoGen
RatGTEx ENSRNOG00000005177 RatGTEx
SMART PKS_ER UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50129 UniProtKB/Swiss-Prot
  SSF51735 UniProtKB/Swiss-Prot
UniProt A0A096MJR4_RAT UniProtKB/TrEMBL
  A0A8I5ZMC2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ASM8 ENTREZGENE, UniProtKB/TrEMBL
  A6ID28 ENTREZGENE, UniProtKB/TrEMBL
  B0BNC9 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-02-15 Cryzl2  crystallin zeta like 2  Tp53i3  tumor protein p53 inducible protein 3  Name and Symbol changed 629549 APPROVED
2014-07-29 Tp53i3  tumor protein p53 inducible protein 3  RGD1304982  similar to RIKEN cDNA 2810025M15  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1304982  similar to RIKEN cDNA 2810025M15   RGD1304982_predicted  similar to RIKEN cDNA 2810025M15 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-20 RGD1304982_predicted  similar to RIKEN cDNA 2810025M15 (predicted)  LOC289138_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC289138_predicted  similar to RIKEN cDNA 2810025M15 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL