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Gene: Rpusd1 (RNA pseudouridine synthase domain containing 1) Rattus norvegicus
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Symbol: Rpusd1
Name: RNA pseudouridine synthase domain containing 1
Description: Predicted to have pseudouridine synthase activity. Predicted to be involved in enzyme-directed rRNA pseudouridine synthesis. Orthologous to human RPUSD1 (RNA pseudouridine synthase domain containing 1); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC287148; RGD1304934; RNA pseudouridylate synthase domain containing 1; RNA pseudouridylate synthase domain-containing protein 1; similar to RIKEN cDNA 2310051D06
Orthologs:
Homo sapiens (human) : RPUSD1 (RNA pseudouridine synthase domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Rpusd1 (RNA pseudouridylate synthase domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rpusd1 (RNA pseudouridine synthase domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RPUSD1 (RNA pseudouridine synthase domain containing 1)
Canis lupus familiaris (dog) : RPUSD1 (RNA pseudouridine synthase domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rpusd1 (RNA pseudouridine synthase domain containing 1)
Sus scrofa (pig) : RPUSD1 (RNA pseudouridine synthase domain containing 1)
Chlorocebus sabaeus (African green monkey) : RPUSD1 (RNA pseudouridine synthase domain containing 1)
Heterocephalus glaber (naked mole-rat) : Rpusd1 (RNA pseudouridine synthase domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01015,099,104 - 15,102,968 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1015,099,009 - 15,102,960 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01014,911,797 - 14,915,689 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41014,996,497 - 15,000,351 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11014,996,508 - 15,000,346 (+)NCBI
Celera1014,420,831 - 14,424,687 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rpusd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1304934
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.