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Gene: Vps50 (VPS50 subunit of EARP/GARPII complex) Rattus norvegicus
Symbol: Vps50
Name: VPS50 subunit of EARP/GARPII complex
RGD ID: 1304751
Description: Predicted to have SNARE binding activity. Predicted to be involved in endocytic recycling. Localizes to membrane; perinuclear region of cytoplasm; and recycling endosome. Orthologous to human VPS50 (VPS50 subunit of EARP/GARPII complex); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; Brodifacoum.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Ccdc132; coiled-coil domain containing 132; coiled-coil domain-containing protein 132; EARP/GARPII complex subunit VPS50; LOC312083; RGD1304751; similar to RIKEN cDNA 1700034M03 gene; syndetin; VPS50 EARP/GARPII complex subunit
Homo sapiens (human) : VPS50 (VPS50 subunit of EARP/GARPII complex)  HGNC  Alliance
Mus musculus (house mouse) : Vps50 (VPS50 EARP/GARPII complex subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps50 (VPS50 subunit of EARP/GARPII complex)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS50 (VPS50 subunit of EARP/GARPII complex)
Canis lupus familiaris (dog) : VPS50 (VPS50 subunit of EARP/GARPII complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps50 (VPS50 subunit of EARP/GARPII complex)
Sus scrofa (pig) : VPS50 (VPS50 subunit of EARP/GARPII complex)
Chlorocebus sabaeus (African green monkey) : VPS50 (VPS50 subunit of EARP/GARPII complex)
Heterocephalus glaber (naked mole-rat) : Vps50 (VPS50 subunit of EARP/GARPII complex)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0428,441,255 - 28,551,784 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl428,441,301 - 28,551,784 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0428,344,487 - 28,455,450 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4428,304,788 - 28,410,697 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1428,318,488 - 28,424,228 (+)NCBI
Celera426,870,657 - 26,971,611 (+)NCBICelera
Cytogenetic Map4q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Vps50
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1304751
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.