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Gene: Rtraf (RNA transcription, translation and transport factor) Rattus norvegicus
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Symbol: Rtraf
Name: RNA transcription, translation and transport factor
RGD ID: 1304704
Description: Predicted to have RNA binding activity; RNA polymerase II complex binding activity; and identical protein binding activity. Predicted to be involved in negative regulation of protein kinase activity; positive regulation of transcription by RNA polymerase II; and tRNA splicing, via endonucleolytic cleavage and ligation. Predicted to localize to several cellular components, including microtubule cytoskeleton; perinuclear region of cytoplasm; and tRNA-splicing ligase complex. Orthologous to human RTRAF (RNA transcription, translation and transport factor); INTERACTS WITH bisphenol A; ethanol; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC302247; LOC302247; LRRGT00192; RGD1304704; similar to Hypothetical protein CGI-99; uncharacterized protein LOC302247; UPF0568 protein C14orf166 homolog
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0154,882,925 - 4,893,890 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl154,882,947 - 4,893,919 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0158,973,714 - 8,984,679 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4154,790,458 - 4,800,905 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1154,780,320 - 4,801,091 (+)NCBI
Celera15150,595 - 161,034 (-)NCBICelera
Cytogenetic Map15p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rtraf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1304704
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.