Ppp1r13b (protein phosphatase 1, regulatory subunit 13B) - Rat Genome Database

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Gene: Ppp1r13b (protein phosphatase 1, regulatory subunit 13B) Rattus norvegicus
Analyze
Symbol: Ppp1r13b
Name: protein phosphatase 1, regulatory subunit 13B
RGD ID: 1304651
Description: Predicted to enable p53 binding activity. Predicted to be involved in intrinsic apoptotic signaling pathway by p53 class mediator. Located in perinuclear region of cytoplasm. Orthologous to human PPP1R13B (protein phosphatase 1 regulatory subunit 13B); PARTICIPATES IN p53 signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: apoptosis-stimulating of p53 protein 1; LOC314465; protein phosphatase 1, regulatory (inhibitor) subunit 13B
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86136,711,834 - 136,785,068 (-)NCBIGRCr8
mRatBN7.26130,890,682 - 130,963,845 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6130,890,679 - 130,963,330 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6131,064,056 - 131,136,375 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06131,361,027 - 131,433,346 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06130,720,717 - 130,793,062 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06136,397,658 - 136,469,757 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6136,398,518 - 136,436,818 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06145,405,635 - 145,472,047 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46136,620,379 - 136,659,341 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16136,627,623 - 136,665,529 (-)NCBI
Celera6128,444,524 - 128,483,486 (-)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IEA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IBA,ISO)
perinuclear region of cytoplasm  (IDA)
plasma membrane  (IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Transcriptional regulation by p53. Beckerman R and Prives C, Cold Spring Harb Perspect Biol. 2010 Aug;2(8):a000935. doi: 10.1101/cshperspect.a000935. Epub 2010 Apr 28.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
8. ASPP1/2 regulate p53-dependent death of retinal ganglion cells through PUMA and Fas/CD95 activation in vivo. Wilson AM, etal., J Neurosci. 2013 Jan 30;33(5):2205-16. doi: 10.1523/JNEUROSCI.2635-12.2013.
Additional References at PubMed
PMID:11684014  


Genomics

Comparative Map Data
Ppp1r13b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86136,711,834 - 136,785,068 (-)NCBIGRCr8
mRatBN7.26130,890,682 - 130,963,845 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6130,890,679 - 130,963,330 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6131,064,056 - 131,136,375 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06131,361,027 - 131,433,346 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06130,720,717 - 130,793,062 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06136,397,658 - 136,469,757 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6136,398,518 - 136,436,818 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06145,405,635 - 145,472,047 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46136,620,379 - 136,659,341 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16136,627,623 - 136,665,529 (-)NCBI
Celera6128,444,524 - 128,483,486 (-)NCBICelera
Cytogenetic Map6q32NCBI
PPP1R13B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3814103,733,195 - 103,848,814 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl14103,733,195 - 103,847,575 (-)EnsemblGRCh38hg38GRCh38
GRCh3714104,199,532 - 104,313,912 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3614103,269,841 - 103,383,680 (-)NCBINCBI36Build 36hg18NCBI36
Build 3414103,269,841 - 103,383,555NCBI
Celera1484,254,345 - 84,368,187 (-)NCBICelera
Cytogenetic Map14q32.33NCBI
HuRef1484,378,399 - 84,492,781 (-)NCBIHuRef
CHM1_114104,138,256 - 104,252,095 (-)NCBICHM1_1
T2T-CHM13v2.01497,969,263 - 98,085,448 (-)NCBIT2T-CHM13v2.0
Ppp1r13b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912111,794,892 - 111,874,549 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12111,794,891 - 111,874,544 (-)EnsemblGRCm39 Ensembl
GRCm3812111,828,457 - 111,908,119 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12111,828,457 - 111,908,110 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712113,066,669 - 113,146,266 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612112,276,266 - 112,355,863 (-)NCBIMGSCv36mm8
Celera12113,037,250 - 113,117,966 (-)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1261.14NCBI
Ppp1r13b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555382,519,765 - 2,594,754 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555382,519,765 - 2,594,769 (-)NCBIChiLan1.0ChiLan1.0
PPP1R13B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v215104,892,934 - 105,008,174 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan114104,109,435 - 104,224,685 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01484,359,917 - 84,474,892 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.114104,168,873 - 104,283,500 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl14104,168,873 - 104,232,974 (-)Ensemblpanpan1.1panPan2
PPP1R13B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1871,462,338 - 71,518,918 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl871,463,270 - 71,553,692 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha870,975,462 - 71,064,278 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0871,741,097 - 71,830,283 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl871,742,027 - 71,831,295 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1871,430,044 - 71,519,088 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0871,470,469 - 71,559,274 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0871,869,071 - 71,957,890 (-)NCBIUU_Cfam_GSD_1.0
Ppp1r13b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244086402,521,342 - 2,618,419 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366211,383,105 - 1,447,353 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366211,383,137 - 1,447,376 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPP1R13B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.27130,799,648 - 130,821,151 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PPP1R13B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12481,663,105 - 81,780,783 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2481,664,508 - 81,779,390 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605368,976,678 - 69,100,388 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ppp1r13b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247341,121,908 - 1,205,736 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247341,121,966 - 1,205,654 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ppp1r13b
270 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:97
Count of miRNA genes:88
Interacting mature miRNAs:91
Transcripts:ENSRNOT00000067118
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)6122549046140994061Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2293085Iddm29Insulin dependent diabetes mellitus QTL 297.66blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)6122549046140286318Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
2312560Pur20Proteinuria QTL 202.10.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)6125628133137801795Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
1641917Colcr5Colorectal carcinoma resistance QTL 53.180.0009intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)6122549046137801795Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat

Markers in Region
D6Rat78  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26130,919,869 - 130,919,985 (+)MAPPERmRatBN7.2
Rnor_6.06136,426,847 - 136,426,962NCBIRnor6.0
Rnor_5.06145,434,824 - 145,434,939UniSTSRnor5.0
RGSC_v3.46136,649,558 - 136,649,854RGDRGSC3.4
RGSC_v3.46136,649,568 - 136,649,683UniSTSRGSC3.4
RGSC_v3.16136,655,745 - 136,656,041RGD
Celera6128,473,713 - 128,473,828UniSTS
SHRSP x BN Map681.7498RGD
SHRSP x BN Map681.7498UniSTS
Cytogenetic Map6q32UniSTS
C85416  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26130,890,241 - 130,890,433 (+)MAPPERmRatBN7.2
Rnor_6.06136,397,221 - 136,397,412NCBIRnor6.0
Rnor_5.06145,405,198 - 145,405,389UniSTSRnor5.0
RGSC_v3.46136,619,942 - 136,620,133UniSTSRGSC3.4
Celera6128,444,087 - 128,444,278UniSTS
Cytogenetic Map6q32UniSTS
BI301159  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26130,894,251 - 130,894,421 (+)MAPPERmRatBN7.2
Rnor_6.06136,401,231 - 136,401,400NCBIRnor6.0
Rnor_5.06145,409,208 - 145,409,377UniSTSRnor5.0
RGSC_v3.46136,623,952 - 136,624,121UniSTSRGSC3.4
Celera6128,448,097 - 128,448,266UniSTS
RH 3.4 Map6781.0UniSTS
Cytogenetic Map6q32UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 31 14 6 9 6 64 26 39 11
Low 1 12 43 35 10 35 8 11 10 9 2 8
Below cutoff

Sequence


RefSeq Acc Id: ENSRNOT00000067118   ⟹   ENSRNOP00000059338
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6130,890,679 - 130,929,650 (-)Ensembl
Rnor_6.0 Ensembl6136,398,716 - 136,436,620 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000082600   ⟹   ENSRNOP00000075666
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6130,890,679 - 130,963,330 (-)Ensembl
Rnor_6.0 Ensembl6136,398,518 - 136,436,818 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000097238   ⟹   ENSRNOP00000088786
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6130,890,679 - 130,963,330 (-)Ensembl
RefSeq Acc Id: NM_001395106   ⟹   NP_001382035
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86136,711,834 - 136,783,976 (-)NCBI
mRatBN7.26130,890,682 - 130,962,822 (-)NCBI
RefSeq Acc Id: XM_006240634   ⟹   XP_006240696
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86136,711,834 - 136,775,278 (-)NCBI
mRatBN7.26130,890,684 - 130,951,659 (-)NCBI
Rnor_6.06136,397,663 - 136,458,746 (-)NCBI
Rnor_5.06145,405,635 - 145,472,047 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008764939   ⟹   XP_008763161
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86136,711,834 - 136,783,846 (-)NCBI
mRatBN7.26130,890,684 - 130,962,822 (-)NCBI
Rnor_6.06136,397,663 - 136,469,757 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008764941   ⟹   XP_008763163
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86136,711,834 - 136,750,677 (-)NCBI
mRatBN7.26130,890,684 - 130,929,527 (-)NCBI
Rnor_6.06136,397,663 - 136,436,466 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039112417   ⟹   XP_038968345
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86136,711,834 - 136,785,068 (-)NCBI
mRatBN7.26130,890,684 - 130,963,845 (-)NCBI
RefSeq Acc Id: XM_039112418   ⟹   XP_038968346
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86136,711,834 - 136,785,068 (-)NCBI
mRatBN7.26130,890,684 - 130,963,844 (-)NCBI
RefSeq Acc Id: XM_063262028   ⟹   XP_063118098
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86136,711,834 - 136,751,185 (-)NCBI
RefSeq Acc Id: XP_006240696   ⟸   XM_006240634
- Peptide Label: isoform X3
- UniProtKB: A6KBU0 (UniProtKB/TrEMBL),   D4A6A8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008763161   ⟸   XM_008764939
- Peptide Label: isoform X4
- UniProtKB: A0A8I6A8S6 (UniProtKB/TrEMBL),   A6KBU0 (UniProtKB/TrEMBL),   D4A6A8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008763163   ⟸   XM_008764941
- Peptide Label: isoform X6
- UniProtKB: A6KBU0 (UniProtKB/TrEMBL),   D4A6A8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000059338   ⟸   ENSRNOT00000067118
RefSeq Acc Id: ENSRNOP00000075666   ⟸   ENSRNOT00000082600
RefSeq Acc Id: XP_038968345   ⟸   XM_039112417
- Peptide Label: isoform X1
- UniProtKB: A6KBU0 (UniProtKB/TrEMBL),   D4A6A8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968346   ⟸   XM_039112418
- Peptide Label: isoform X2
- UniProtKB: A6KBU0 (UniProtKB/TrEMBL),   D4A6A8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000088786   ⟸   ENSRNOT00000097238
RefSeq Acc Id: NP_001382035   ⟸   NM_001395106
- UniProtKB: A0A0G2KB61 (UniProtKB/TrEMBL),   A6KBU0 (UniProtKB/TrEMBL),   D4A6A8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118098   ⟸   XM_063262028
- Peptide Label: isoform X5
Protein Domains
SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2KB61-F1-model_v2 AlphaFold A0A0G2KB61 1-1085 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1304651 AgrOrtholog
BioCyc Gene G2FUF-35824 BioCyc
Ensembl Genes ENSRNOG00000012653 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000067118.3 UniProtKB/TrEMBL
  ENSRNOT00000082600 ENTREZGENE
  ENSRNOT00000082600.2 UniProtKB/TrEMBL
  ENSRNOT00000097238.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  ASPP1/2 UniProtKB/TrEMBL
  ASPP2-like_RA UniProtKB/TrEMBL
  ASPP_1 UniProtKB/TrEMBL
  SH3-like_dom UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
  Ubiquitin-rel_dom UniProtKB/TrEMBL
KEGG Report rno:314465 UniProtKB/TrEMBL
NCBI Gene 314465 ENTREZGENE
PANTHER APOPTOSIS-STIMULATING OF P53 PROTEIN UniProtKB/TrEMBL
  PTHR24131:SF5 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  ASPP2-like_RA UniProtKB/TrEMBL
  SH3_1 UniProtKB/TrEMBL
PhenoGen Ppp1r13b PhenoGen
PRINTS SH3DOMAIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012653 RatGTEx
SMART ANK UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
Superfamily-SCOP ANK UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
  SSF54236 UniProtKB/TrEMBL
UniProt A0A0G2KB61 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A8S6 ENTREZGENE, UniProtKB/TrEMBL
  A6KBU0 ENTREZGENE, UniProtKB/TrEMBL
  D4A6A8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-10-18 Ppp1r13b  protein phosphatase 1, regulatory subunit 13B  Ppp1r13b  protein phosphatase 1, regulatory (inhibitor) subunit 13B  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Ppp1r13b  protein phosphatase 1, regulatory (inhibitor) subunit 13B   Ppp1r13b_predicted  protein phosphatase 1, regulatory (inhibitor) subunit 13B (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Ppp1r13b_predicted  protein phosphatase 1, regulatory (inhibitor) subunit 13B (predicted)      Symbol and Name status set to approved 70820 APPROVED