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Gene: Lysmd2 (LysM domain containing 2) Rattus norvegicus
Analyze
Symbol: Lysmd2
Name: LysM domain containing 2
Description: Orthologous to human LYSMD2 (LysM domain containing 2); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC300839; lysM and putative peptidoglycan-binding domain-containing protein 2; LysM, putative peptidoglycan-binding, domain containing 2; RGD1304585; similar to RIKEN cDNA 2210402C18
Orthologs:
Homo sapiens (human) : LYSMD2 (LysM domain containing 2)  HGNC  Alliance
Mus musculus (house mouse) : Lysmd2 (LysM, putative peptidoglycan-binding, domain containing 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lysmd2 (LysM domain containing 2)
Pan paniscus (bonobo/pygmy chimpanzee) : LYSMD2 (LysM domain containing 2)
Canis lupus familiaris (dog) : LYSMD2 (LysM domain containing 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lysmd2 (LysM domain containing 2)
Sus scrofa (pig) : LYSMD2 (LysM domain containing 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0882,560,363 - 82,576,662 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0882,160,974 - 82,178,174 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4880,446,544 - 80,462,607 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1880,465,376 - 80,482,027 (+)NCBI
Celera876,169,272 - 76,184,220 (+)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Lysmd2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1304585
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.