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Gene: Gtf2h4 (general transcription factor 2H subunit 4) Rattus norvegicus
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Symbol: Gtf2h4
Name: general transcription factor 2H subunit 4
Description: Predicted to contribute to DNA-dependent ATPase activity and RNA polymerase II CTD heptapeptide repeat kinase activity. Predicted to be involved in nucleotide-excision repair; phosphorylation of RNA polymerase II C-terminal domain; and transcription by RNA polymerase II. Predicted to localize to the core TFIIH complex portion of holo TFIIH complex; nuclear speck; and transcription factor TFIID complex. Orthologous to human GTF2H4 (general transcription factor IIH subunit 4); PARTICIPATES IN RNA polymerase II transcription initiation pathway; nucleotide excision repair pathway; INTERACTS WITH bisphenol A; cadmium dichloride; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: general transcription factor II H, polypeptide 4; general transcription factor IIH subunit 4; MGC156549; TFIIH transcription/DNA repair factor p52 subunit
Orthologs:
Homo sapiens (human) : GTF2H4 (general transcription factor IIH subunit 4)  HGNC  Alliance
Mus musculus (house mouse) : Gtf2h4 (general transcription factor II H, polypeptide 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gtf2h4 (general transcription factor IIH subunit 4)
Pan paniscus (bonobo/pygmy chimpanzee) : GTF2H4 (general transcription factor IIH subunit 4)
Canis lupus familiaris (dog) : GTF2H4 (general transcription factor IIH subunit 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gtf2h4 (general transcription factor IIH subunit 4)
Sus scrofa (pig) : GTF2H4 (general transcription factor IIH subunit 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0203,582,688 - 3,588,373 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl203,582,742 - 3,588,375 (+)Ensembl
Rnor_5.0205,679,682 - 5,685,358 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,222,265 - 3,227,921 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,222,534 - 3,228,142 (+)NCBI
Celera20497,038 - 502,694 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Gtf2h4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303309
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.