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Gene: Slc25a47 (solute carrier family 25, member 47) Rattus norvegicus
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Symbol: Slc25a47
Name: solute carrier family 25, member 47
Description: Predicted to have acyl carnitine transmembrane transporter activity. Predicted to be involved in acyl carnitine transport. Predicted to localize to the integral component of membrane and mitochondrial inner membrane. Orthologous to human SLC25A47 (solute carrier family 25 member 47); INTERACTS WITH 2,3,4,7,8-Pentachlorodibenzofuran; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Hdmcp; hepatocellular carcinoma down-regulated mitochondrial carrier homolog; mitochondrial hepatocellular carcinoma-downregulated carrier protein; Slc24a47; solute carrier family 25 member 47
Orthologs:
Homo sapiens (human) : SLC25A47 (solute carrier family 25 member 47)  HGNC  Alliance
Mus musculus (house mouse) : Slc25a47 (solute carrier family 25, member 47)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc25a47 (solute carrier family 25 member 47)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC25A47 (solute carrier family 25 member 47)
Canis lupus familiaris (dog) : SLC25A47 (solute carrier family 25 member 47)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc25a47 (solute carrier family 25 member 47)
Sus scrofa (pig) : SLC25A47 (solute carrier family 25 member 47)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06132,762,306 - 132,767,940 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6132,762,280 - 132,768,379 (+)Ensembl
Rnor_5.06141,932,382 - 141,938,016 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46133,192,144 - 133,197,778 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16133,198,330 - 133,203,965 (+)NCBI
Celera6125,318,263 - 125,323,897 (+)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc25a47
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303247
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.