Gene: Samm50 (SAMM50 sorting and assembly machinery component) Rattus norvegicus
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Symbol: Samm50
Name: SAMM50 sorting and assembly machinery component
Description: INVOLVED IN cristae formation (ortholog); mitochondrial respiratory chain complex assembly (ortholog); protein insertion into mitochondrial outer membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH nonalcoholic fatty liver disease (ortholog); FOUND IN integral component of membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog); INTERACTS WITH 2,4,6-trinitrotoluene; 2,6-dinitrotoluene; atrazine
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC94439; similar to Protein CGI-51; sorting and assembly machinery component 50 homolog; sorting and assembly machinery component 50 homolog (S. cerevisiae); sorting and assembly machinery component 50 homolog A
Orthologs:
Homo sapiens (human) : SAMM50 (SAMM50 sorting and assembly machinery component)  HGNC  Alliance
Mus musculus (house mouse) : Samm50 (SAMM50 sorting and assembly machinery component)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Samm50 (SAMM50 sorting and assembly machinery component)
Pan paniscus (bonobo/pygmy chimpanzee) : SAMM50 (SAMM50 sorting and assembly machinery component)
Canis lupus familiaris (dog) : PARVB (parvin beta)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Samm50 (SAMM50 sorting and assembly machinery component)
Sus scrofa (pig) : SAMM50 (SAMM50 sorting and assembly machinery component)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07125,058,966 - 125,082,506 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07125,047,478 - 125,071,018 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47122,176,824 - 122,201,032 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17122,211,053 - 122,235,261 (+)NCBI
Celera7111,623,449 - 111,647,630 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Samm50
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303219
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE