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Gene: Sgce (sarcoglycan, epsilon) Rattus norvegicus
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Symbol: Sgce
Name: sarcoglycan, epsilon
Description: Involved in brain development; kidney development; and skeletal muscle tissue development. Predicted to localize to the Golgi apparatus; dendrite membrane; and sarcoglycan complex. Human ortholog(s) of this gene implicated in myoclonic dystonia. Orthologous to human SGCE (sarcoglycan epsilon); INTERACTS WITH (RS)-amphetamine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: epsilon-sarcoglycan; epsilon-SG
Orthologs:
Homo sapiens (human) : SGCE (sarcoglycan epsilon)  HGNC  Alliance
Mus musculus (house mouse) : Sgce (sarcoglycan, epsilon)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sgce (sarcoglycan epsilon)
Pan paniscus (bonobo/pygmy chimpanzee) : SGCE (sarcoglycan epsilon)
Canis lupus familiaris (dog) : SGCE (sarcoglycan epsilon)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sgce (sarcoglycan epsilon)
Sus scrofa (pig) : SGCE (sarcoglycan epsilon)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0429,726,140 - 29,769,902 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0429,634,749 - 29,678,914 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera428,302,370 - 28,347,652 (-)NCBICelera
Cytogenetic Map4q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sgce
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303201
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.