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Gene: Tspan5 (tetraspanin 5) Rattus norvegicus
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Symbol: Tspan5
Name: tetraspanin 5
Description: Predicted to have enzyme binding activity. Predicted to be involved in positive regulation of Notch signaling pathway; protein localization to plasma membrane; and protein maturation. Predicted to localize to the integral component of plasma membrane. Orthologous to human TSPAN5 (tetraspanin 5); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: tetraspan 5; tetraspanin-5; Tm4sf9; transmembrane 4 superfamily member 9; Tspan-5
Orthologs:
Homo sapiens (human) : TSPAN5 (tetraspanin 5)  HGNC  Alliance
Mus musculus (house mouse) : Tspan5 (tetraspanin 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tspan5 (tetraspanin 5)
Pan paniscus (bonobo/pygmy chimpanzee) : TSPAN5 (tetraspanin 5)
Canis lupus familiaris (dog) : TSPAN5 (tetraspanin 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tspan5 (tetraspanin 5)
Sus scrofa (pig) : TSPAN5 (tetraspanin 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02244,058,186 - 244,224,059 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02262,587,481 - 262,753,105 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42236,314,737 - 236,487,072 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12236,436,906 - 236,471,800 (+)NCBI
Celera2219,449,291 - 219,612,375 (+)NCBICelera
Cytogenetic Map2q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
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RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Tspan5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303176
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-06-11
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.