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Gene: Ltb (lymphotoxin beta) Rattus norvegicus
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Symbol: Ltb
Name: lymphotoxin beta
Description: Predicted to have tumor necrosis factor binding activity. Predicted to be involved in immune response. Predicted to localize to the integral component of membrane. Orthologous to human LTB (lymphotoxin beta); PARTICIPATES IN cytokine mediated signaling pathway; rheumatoid arthritis pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: lymphotoxin B; lymphotoxin beta (TNF superfamily, member 3); lymphotoxin-beta; MGC108924
Orthologs:
Homo sapiens (human) : LTB (lymphotoxin beta)  HGNC  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ltb (lymphotoxin beta)
Pan paniscus (bonobo/pygmy chimpanzee) : LTB (lymphotoxin beta)
Canis lupus familiaris (dog) : LTB (lymphotoxin beta)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ltb (lymphotoxin beta)
Sus scrofa (pig) : LTB (lymphotoxin beta)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,184,631 - 5,186,476 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,184,515 - 5,186,503 (+)Ensembl
Rnor_5.0206,941,753 - 6,943,598 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,666,524 - 3,668,369 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,666,751 - 3,668,596 (-)NCBI
Celera204,396,109 - 4,397,954 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ltb
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303162
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.