Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ly6g5b (lymphocyte antigen 6 family member G5B) Rattus norvegicus
Analyze
Symbol: Ly6g5b
Name: lymphocyte antigen 6 family member G5B
RGD ID: 1303101
Description: Predicted to have identical protein binding activity. Predicted to colocalize with external side of plasma membrane. Orthologous to human LY6G5B (lymphocyte antigen 6 family member G5B); INTERACTS WITH bisphenol A; cadmium dichloride; manganese(II) chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Ly6g5b splicing isoform 754; Ly6g5bsplicing isoform 283; Ly6g5bsplicing isoform 529; Ly6g5bsplicing isoform 658; lymphocyte antigen 6 complex G5B; lymphocyte antigen 6 complex locus protein G5b; lymphocyte antigen 6 complex, locus G5B
Orthologs:
Homo sapiens (human) : LY6G5B (lymphocyte antigen 6 family member G5B)  HGNC  Alliance
Mus musculus (house mouse) : Ly6g5b (lymphocyte antigen 6 complex, locus G5B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ly6g5b (lymphocyte antigen 6 family member G5B)
Pan paniscus (bonobo/pygmy chimpanzee) : LY6G5B (lymphocyte antigen 6 family member G5B)
Canis lupus familiaris (dog) : LY6G5B (lymphocyte antigen 6 family member G5B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ly6g5b (lymphocyte antigen 6 family member G5B)
Chlorocebus sabaeus (African green monkey) : LY6G5B (lymphocyte antigen 6 family member G5B)
Heterocephalus glaber (naked mole-rat) : Ly6g5b (lymphocyte antigen 6 family member G5B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,106,248 - 5,108,604 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,106,890 - 5,107,899 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,180,182 - 7,181,118 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,769,818 - 3,770,754 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,770,044 - 3,770,981 (+)NCBI
Celera204,318,542 - 4,319,478 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ly6g5b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303101
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2020-09-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.