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Gene: Skiv2l (Ski2 like RNA helicase) Rattus norvegicus
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Symbol: Skiv2l
Name: Ski2 like RNA helicase
Description: Predicted to have RNA helicase activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay. Predicted to localize to Ski complex. Human ortholog(s) of this gene implicated in trichohepatoenteric syndrome 2. Orthologous to human SKIV2L (Ski2 like RNA helicase); PARTICIPATES IN RNA degradation pathway; INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: helicase SKI2W; SKI2 homolog, superkiller viralicidic activity 2-like; superkiller viralicidic activity 2-like; superkiller viralicidic activity 2-like (S. cerevisiae ); superkiller viralicidic activity 2-like (S. cerevisiae)
Orthologs:
Homo sapiens (human) : SKIV2L (Ski2 like RNA helicase)  HGNC  Alliance
Mus musculus (house mouse) : Skiv2l (superkiller viralicidic activity 2-like (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Skiv2l (Ski2 like RNA helicase)
Pan paniscus (bonobo/pygmy chimpanzee) : SKIV2L (Ski2 like RNA helicase)
Canis lupus familiaris (dog) : SKIV2L (Ski2 like RNA helicase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Skiv2l (Ski2 like RNA helicase)
Sus scrofa (pig) : SKIV2L (Ski2 like RNA helicase)
Chlorocebus sabaeus (African green monkey) : SKIV2L (Ski2 like RNA helicase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0204,519,457 - 4,530,177 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,519,474 - 4,530,126 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,599,256 - 6,609,971 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,084,422 - 4,093,652 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1204,084,648 - 4,093,723 (+)NCBI
Celera204,037,441 - 4,048,096 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Skiv2l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303059
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2020-09-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.