Gene: Pclaf (PCNA clamp associated factor) Rattus norvegicus
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Symbol: Pclaf
Name: PCNA clamp associated factor
Description: Predicted to have chromatin binding activity; predicted to be involved in several processes, including cellular macromolecule biosynthetic process, centrosome cycle, and regulation of cell cycle; predicted to localize to the centrosome, nucleus, and perinuclear region of cytoplasm; orthologous to human PCLAF (PCNA clamp associated factor); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: HCV NS5A-transactivated protein 9 homolog; NS5A (hepatitis C virus) transactivated protein 9; Ns5atp9; p15PAF; Paf; PAF15; PCNA-associated factor; PCNA-associated factor of 15 kDa
Orthologs:
Homo sapiens (human) : PCLAF (PCNA clamp associated factor)  HGNC  Alliance
Mus musculus (house mouse) : Pclaf (PCNA clamp associated factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pclaf (PCNA clamp associated factor)
Pan paniscus (bonobo/pygmy chimpanzee) : PCLAF (PCNA clamp associated factor)
Canis lupus familiaris (dog) : PCLAF (PCNA clamp associated factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pclaf (PCNA clamp associated factor)
Sus scrofa (pig) : PCLAF (PCNA clamp associated factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0871,514,281 - 71,526,182 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0871,186,712 - 71,198,728 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4870,159,283 - 70,172,116 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1870,178,336 - 70,191,170 (+)NCBI
Celera865,810,620 - 65,822,516 (+)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pclaf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303041
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.