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Gene: Prrc2a (proline-rich coiled-coil 2A) Rattus norvegicus
Analyze
Symbol: Prrc2a
Name: proline-rich coiled-coil 2A
Description: Predicted to localize to the cytosol; nucleoplasm; and plasma membrane. Human ortholog(s) of this gene implicated in type 1 diabetes mellitus. Orthologous to human PRRC2A (proline rich coiled-coil 2A); INTERACTS WITH 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Bat2; HLA-B associated transcript 2; HLA-B-associated transcript 2; large proline-rich protein BAT2; proline-rich and coiled-coil-containing protein 2A
Orthologs:
Homo sapiens (human) : PRRC2A (proline rich coiled-coil 2A)  HGNC  Alliance
Mus musculus (house mouse) : Prrc2a (proline-rich coiled-coil 2A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prrc2a (proline rich coiled-coil 2A)
Pan paniscus (bonobo/pygmy chimpanzee) : PRRC2A (proline rich coiled-coil 2A)
Canis lupus familiaris (dog) : PRRC2A (proline rich coiled-coil 2A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prrc2a (proline rich coiled-coil 2A)
Sus scrofa (pig) : PRRC2A (proline rich coiled-coil 2A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,139,881 - 5,155,371 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0207,213,139 - 7,228,817 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,724,278 - 3,737,795 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,724,504 - 3,737,844 (+)NCBI
Celera204,351,502 - 4,365,021 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

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References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
  
More on Prrc2a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303025
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.