Gene: Gm46560 (predicted gene, 46560) Mus musculus |
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Analyze |
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Symbol: |
Gm46560 |
Name: |
predicted gene, 46560 |
RGD ID: |
12795333 |
MGI Page |
MGI |
Description: |
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Type: |
ncrna (Ensembl: lncRNA)
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RefSeq Status: |
MODEL |
Latest Assembly: |
GRCm39 - Mouse Genome Assembly GRCm39 |
Position: |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 31,327,149 - 31,332,769 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 31,325,478 - 31,332,832 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 31,508,330 - 31,513,951 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 31,508,387 - 31,511,777 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | Cytogenetic Map | 16 | B2 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
QTLs in Region (GRCm39)
11059560 | Lmr12b_m | leishmaniasis resistance 12b (mouse) | | | | | 16 | 28792813 | 62792952 | Mouse | 26884376 | Skwq4_m | skull length QTL 4, 5 week (mouse) | | | | | 16 | 8417864 | 90896888 | Mouse | 1301841 | Lrnx9_m | learning-contextual 9 (mouse) | | | Not determined | | 16 | 12225360 | 46225471 | Mouse | 4141179 | Ipng3_m | imprinted postnatal growth 3 (mouse) | | | Not determined | | | 22775252 | 57594076 | Mouse | 38501069 | Tip4_m | tuberculosis immunophenotype 4, IFN-g level (mouse) | | | | | 16 | 4317864 | 44520363 | Mouse | 26884432 | Zlq7_m | zygomatic length QTL 7, 10 week (mouse) | | | | | 16 | 3817864 | 64620363 | Mouse | 11049571 | Lmr12c_m | leishmaniasis resistance 12c (mouse) | | | | | 16 | 28792813 | 62792952 | Mouse | 1301086 | Lprm5_m | lymphoproliferation modifier 5 (mouse) | | | Not determined | | 16 | 11848824 | 45848923 | Mouse | 27226768 | Tibl9_m | tibia length 9, 5 week (mouse) | | | | | 16 | 3317864 | 51420363 | Mouse | 11059559 | Lmr12a_m | leishmaniasis resistance 12a (mouse) | | | | | 16 | 28792813 | 62792952 | Mouse | 1301443 | Mopkd2_m | modifier of polycystic kidney disease progression 2 (mouse) | | | Not determined | | 16 | 4646314 | 38646414 | Mouse | 10043978 | Obq35_m | obesity QTL 35 (mouse) | | | Not determined | | 16 | 9881631 | 43881631 | Mouse | 1357763 | Lp1_m | lymphocyte proliferation 1 (mouse) | | | Not determined | | 16 | 6542979 | 65466552 | Mouse | 1357517 | Bwtn1_m | body weight at necropsy 1 (mouse) | | | Not determined | | 16 | 20019329 | 85600826 | Mouse | 1300943 | Skts9_m | skin tumor susceptibility 9 (mouse) | | | Not determined | | 16 | 5775252 | 39775440 | Mouse | 1300915 | Lmr12_m | leishmaniasis resistance 12 (mouse) | | | Not determined | | 16 | 28792813 | 62792952 | Mouse | 1300656 | Bgeq15_m | body growth early QTL 15 (mouse) | | | Not determined | | 16 | 5775252 | 39775440 | Mouse | 4142236 | Pstc4_m | periosteal circumference 4 (mouse) | | | Not determined | | 16 | 15522909 | 49523112 | Mouse | 1300534 | Bmd15_m | bone mineral density 15 (mouse) | | | Not determined | | 16 | 21938383 | 55938574 | Mouse | 11251724 | Ewc6_m | ethanol withdrawal and consumption 6 (mouse) | | | | | 16 | 8226052 | 42226052 | Mouse | 1300987 | Skull23_m | skull morphology 23 (mouse) | | | Not determined | | 16 | 5775252 | 39775440 | Mouse | 1301945 | Skl7_m | skeletal size (tail length) 7 (mouse) | | | Not determined | | 16 | 5775252 | 39775440 | Mouse | 25394537 | Skmw83_m | skeletal muscle weight 83, soleus (mouse) | | | | | 16 | 31304465 | 33189707 | Mouse | 4141010 | Bbq1_m | brain and behavior QTL 1 (mouse) | | | Not determined | | 16 | 6477009 | 35021216 | Mouse | 10045614 | Rapop6_m | radiation-induced apoptosis 6 (mouse) | | | Not determined | | 16 | 14802921 | 48803032 | Mouse | 15092062 | Egrme4_m | early growth rate, maternal effect 4 (mouse) | | | | | 16 | 25218664 | 44220250 | Mouse | 27095908 | Scvln7_m | sacral vertebrae length 2, 5 week (mouse) | | | | | 16 | 3317864 | 39820362 | Mouse | 27226785 | Feml12_m | femur length 12, 5 week (mouse) | | | | | 16 | 3317864 | 64620363 | Mouse | |
Expression
RNA-SEQ Expression
Sequence
Ensembl Acc Id: |
ENSMUST00000231805 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,327,205 - 31,330,595 (+) | Ensembl | GRCm38.p6 Ensembl | 16 | 31,508,387 - 31,511,777 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255439 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,325,478 - 31,332,832 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255440 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,326,044 - 31,332,762 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255441 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,327,110 - 31,332,744 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255442 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,327,172 - 31,332,744 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255443 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,327,186 - 31,332,758 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255444 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,325,480 - 31,330,986 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255445 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,327,935 - 31,332,744 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255446 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,328,047 - 31,332,767 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255447 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,328,085 - 31,332,769 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255448 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,328,086 - 31,332,758 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255449 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,328,989 - 31,332,769 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255450 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,329,132 - 31,332,744 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255451 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,329,133 - 31,332,744 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255452 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,329,133 - 31,332,744 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255453 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,329,136 - 31,332,744 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255454 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,329,133 - 31,332,740 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255455 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,329,160 - 31,332,758 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255456 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,329,185 - 31,332,745 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255457 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,329,419 - 31,332,769 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255458 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,327,965 - 31,331,035 (+) | Ensembl |
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Ensembl Acc Id: |
ENSMUST00000255459 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 31,328,004 - 31,330,986 (+) | Ensembl |
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RefSeq Acc Id: |
XR_001781978 |
Type: |
NON-CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 | 16 | 31,328,897 - 31,330,986 (+) | NCBI | GRCm38 | 16 | 31,510,082 - 31,512,168 (+) | NCBI |
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Sequence: |
CTATCTATCTAAATCAGAAATCCCTTTACTGCCAAGAGCCTGTCAGAGAGCCCTGTTTCCTGTC AGAAGTCATACTCTTCCCATAGGAAAGCACTGGCCTTGCTGGATCTTTCTCTCCACACGATCTT GTTTGCTCTCCTGGGACATCAGCAGCTTTCCTGTGCCTCTCTGTGGGGAGAGGCTGAGCAGCTG CTGCCTGTTTACACCTGTTTTGCTCTTTATCAGGAAGTTCAGTCAGAGGTCCAGATGCAGCCTG GGGCTGTGGTCACAGCTCGCCATCCCATCCGCATTGCTTGGTCTGCACCTTTGCTCTCCCAGCA CCGGCACTATCCTCGTCATCTCGGCCACGATTATGGATGCGCTGTCCTCTGCCCTGGCTGGAAC AGTTGCCTTCCAGAAAGGTACTACCTGGCTTGAACAACAACAAATGTCTTTTCCTGTAACTTGT ATTGCCCCACAGAGGAAGACGAACAGCTCTCCCACACTGGAGCCATAACTTTACCCATGAGCCT TCACTCTCAGCCAGGGCAGACAAGAGTCCAGCGCGTCTGAGACTGTTCCTGCTCTGACCCAGAT ATCCAACCTGCTAGTGTGTGAGAATACTCCATGTCTCAGTCAGGATTTCCATTGCTGTGAAGAG ACACCGTGACCACAGCAACTCTTATGAAGGAAAAGATTTCATGTGGACTGGCCTGCAGACCAGA GATTTAGTCTACTGTTGTCATGGCAGGAAACCTAGCAGTGTGCATGGTGCTGGAGAGGAGCTAA GAGTTCTACATCCCGATCAGAAGGCAGCAGGAAGGGAACTTTGAGCCACTAGACCTGAGCTTCT GAGACTTCAAAGCCTACCCCTTGGTGACATGCTTCCCTCAACAAGCCACACCCACTCCAGTACC TAATAGTGCCACTCCCTGTGGATCTGTGGGGGCCGTTTTCATTCAAACTTCCACACCCCATATA TTTCTTGGGTTGCGTGTCTACTTTGTCACACAACAGATATAGCGTTCTGGCAAGCTGTAGCATG TGCCACCATTTTCTCTCAGAACCACTCAAATAGGTGACAACACCCTCTTACACAAGCCTCTGCC ACCTGGAAGAGAGTTCATCCCGCTGCAAGAGAAGGAGGACTGAGATTGAAGGGGTGTTTACTAA TTATTTATTTATTTTTACTAATTATCATTTACTAATTCTGATTTCTAACTAAGGGTTAGTGTTT AAGGTATAAGGTGCTGGGGTGGCTAGTTTTAATTGTTAACTTGACACCATATAGAGTCACCTGG GAAGAGCTTTGATTGATTACCTAGATAAAGTTGGCCCACAGGCCTGCTATTATTTTGATTGTGT TAATCGAGGTGGGAAGACCTGCCCACTGTGGGTGGTAACATTCCCTAGGAAGGGGGATCATGAA CTGTATGAAAGGGGAGAAAACGAATTGGTCCTAAGCACGCATGATTTACTCCAGTGTGCTCTGC TCTTGACTGTGAATGTAATGTTCATTCAAGGTCCTGCTGCTGTGACTTCCCTTCTATGCCTTAC TGTACCATGGAATTGTGAGCTAAAATAAAGCCTTTCTTTCTTAAA
hide sequence
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RefSeq Acc Id: |
XR_001781979 |
Type: |
NON-CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 | 16 | 31,327,149 - 31,330,986 (+) | NCBI | GRCm38 | 16 | 31,508,330 - 31,512,168 (+) | NCBI |
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Sequence: |
TGAGCTGTAGTAGCTATAAGGCAACTGCCGGGATCTTGTACGTTTTTACAGAAAGGGGAGGAGA CTGAGGTCTTCACAGTCTCCTGGTTCGTGTCTACACTCTCCCTGGGAAGTTGTAGAAGAGCCTT GATCTAGACAAAAATTAAGGATCACTACTGAGGACCCAAGGGACTTCAATCACTTCCTCCGGAA GTTCAGTCAGAGGTCCAGATGCAGCCTGGGGCTGTGGTCACAGCTCGCCATCCCATCCGCATTG CTTGGTCTGCACCTTTGCTCTCCCAGCACCGGCACTATCCTCGTCATCTCGGCCACGATTATGG ATGCGCTGTCCTCTGCCCTGGCTGGAACAGTTGCCTTCCAGAAAGGTACTACCTGGCTTGAACA ACAACAAATGTCTTTTCCTGTAACTTGTATTGCCCCACAGAGGAAGACGAACAGCTCTCCCACA CTGGAGCCATAACTTTACCCATGAGCCTTCACTCTCAGCCAGGGCAGACAAGAGTCCAGCGCGT CTGAGACTGTTCCTGCTCTGACCCAGATATCCAACCTGCTAGTGTGTGAGAATACTCCATGTCT CAGTCAGGATTTCCATTGCTGTGAAGAGACACCGTGACCACAGCAACTCTTATGAAGGAAAAGA TTTCATGTGGACTGGCCTGCAGACCAGAGATTTAGTCTACTGTTGTCATGGCAGGAAACCTAGC AGTGTGCATGGTGCTGGAGAGGAGCTAAGAGTTCTACATCCCGATCAGAAGGCAGCAGGAAGGG AACTTTGAGCCACTAGACCTGAGCTTCTGAGACTTCAAAGCCTACCCCTTGGTGACATGCTTCC CTCAACAAGCCACACCCACTCCAGTACCTAATAGTGCCACTCCCTGTGGATCTGTGGGGGCCGT TTTCATTCAAACTTCCACACCCCATATATTTCTTGGGTTGCGTGTCTACTTTGTCACACAACAG ATATAGCGTTCTGGCAAGCTGTAGCATGTGCCACCATTTTCTCTCAGAACCACTCAAATAGGTG ACAACACCCTCTTACACAAGCCTCTGCCACCTGGAAGAGAGTTCATCCCGCTGCAAGAGAAGGA GGACTGAGATTGAAGGGGTGTTTACTAATTATTTATTTATTTTTACTAATTATCATTTACTAAT TCTGATTTCTAACTAAGGGTTAGTGTTTAAGGTATAAGGTGCTGGGGTGGCTAGTTTTAATTGT TAACTTGACACCATATAGAGTCACCTGGGAAGAGCTTTGATTGATTACCTAGATAAAGTTGGCC CACAGGCCTGCTATTATTTTGATTGTGTTAATCGAGGTGGGAAGACCTGCCCACTGTGGGTGGT AACATTCCCTAGGAAGGGGGATCATGAACTGTATGAAAGGGGAGAAAACGAATTGGTCCTAAGC ACGCATGATTTACTCCAGTGTGCTCTGCTCTTGACTGTGAATGTAATGTTCATTCAAGGTCCTG CTGCTGTGACTTCCCTTCTATGCCTTACTGTACCATGGAATTGTGAGCTAAAATAAAGCCTTTC TTTCTTAAA
hide sequence
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RefSeq Acc Id: |
XR_001781980 |
Type: |
NON-CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 | 16 | 31,328,142 - 31,330,986 (+) | NCBI | GRCm38 | 16 | 31,509,324 - 31,512,168 (+) | NCBI |
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Sequence: |
CCTGCCACAAAAGCGGAAGTTCAGTCAGAGGTCCAGATGCAGCCTGGGGCTGTGGTCACAGCTC GCCATCCCATCCGCATTGCTTGGTCTGCACCTTTGCTCTCCCAGCACCGGCACTATCCTCGTCA TCTCGGCCACGATTATGGATGCGCTGTCCTCTGCCCTGGCTGGAACAGTTGCCTTCCAGAAAGG TACTACCTGGCTTGAACAACAACAAATGTCTTTTCCTGTAACTTGTATTGCCCCACAGAGGAAG ACGAACAGCTCTCCCACACTGGAGCCATAACTTTACCCATGAGCCTTCACTCTCAGCCAGGGCA GACAAGAGTCCAGCGCGTCTGAGACTGTTCCTGCTCTGACCCAGATATCCAACCTGCTAGTGTG TGAGAATACTCCATGTCTCAGTCAGGATTTCCATTGCTGTGAAGAGACACCGTGACCACAGCAA CTCTTATGAAGGAAAAGATTTCATGTGGACTGGCCTGCAGACCAGAGATTTAGTCTACTGTTGT CATGGCAGGAAACCTAGCAGTGTGCATGGTGCTGGAGAGGAGCTAAGAGTTCTACATCCCGATC AGAAGGCAGCAGGAAGGGAACTTTGAGCCACTAGACCTGAGCTTCTGAGACTTCAAAGCCTACC CCTTGGTGACATGCTTCCCTCAACAAGCCACACCCACTCCAGTACCTAATAGTGCCACTCCCTG TGGATCTGTGGGGGCCGTTTTCATTCAAACTTCCACACCCCATATATTTCTTGGGTTGCGTGTC TACTTTGTCACACAACAGATATAGCGTTCTGGCAAGCTGTAGCATGTGCCACCATTTTCTCTCA GAACCACTCAAATAGGTGACAACACCCTCTTACACAAGCCTCTGCCACCTGGAAGAGAGTTCAT CCCGCTGCAAGAGAAGGAGGACTGAGATTGAAGGGGTGTTTACTAATTATTTATTTATTTTTAC TAATTATCATTTACTAATTCTGATTTCTAACTAAGGGTTAGTGTTTAAGGTATAAGGTGCTGGG GTGGCTAGTTTTAATTGTTAACTTGACACCATATAGAGTCACCTGGGAAGAGCTTTGATTGATT ACCTAGATAAAGTTGGCCCACAGGCCTGCTATTATTTTGATTGTGTTAATCGAGGTGGGAAGAC CTGCCCACTGTGGGTGGTAACATTCCCTAGGAAGGGGGATCATGAACTGTATGAAAGGGGAGAA AACGAATTGGTCCTAAGCACGCATGATTTACTCCAGTGTGCTCTGCTCTTGACTGTGAATGTAA TGTTCATTCAAGGTCCTGCTGCTGTGACTTCCCTTCTATGCCTTACTGTACCATGGAATTGTGA GCTAAAATAAAGCCTTTCTTTCTTAAA
hide sequence
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RefSeq Acc Id: |
XR_001781981 |
Type: |
NON-CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 | 16 | 31,328,895 - 31,332,769 (+) | NCBI | GRCm38 | 16 | 31,510,081 - 31,513,951 (+) | NCBI |
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Sequence: |
ATCTATCTATCTAAATCAGAAATCCCTTTACTGCCAAGAGCCTGTCAGAGAGCCCTGTTTCCTG TCAGAAGTCATACTCTTCCCATAGGAAAGCACTGGCCTTGCTGGATCTTTCTCTCCACACGATC TTGTTTGCTCTCCTGGGACATCAGCAGCTTTCCTGTGCCTCTCTGTGGGGAGAGGCTGAGCAGC TGCTGCCTGTTTACACCTGTTTTGCTCTTTATCAGGAAGTTCAGTCAGAGGTCCAGATGCAGCC TGGGGCTGTGGTCACAGCTCGCCATCCCATCCGCATTGCTTGGTCTGCACCTTTGCTCTCCCAG CACCGGCACTATCCTCGTCATCTCGGCCACGATTATGGATGCGCTGTCCTCTGCCCTGGCTGGA ACAGTTGCCTTCCAGAAAGGTACTACCTGGCTTGAACAACAACAAATGTCTTTTCCTGTAACTT GTATTGCCCCACAGAGGAAGACGAACAGCTCTCCCACACTGGAGCCATAACTTTACCCATGAGC CTTCACTCTCAGCCAGGGCAGACAAGAGTCCAGCGCGTCTGAGACTGTTCCTGCTCTGACCCAG ATATCCAACCTGCTAGTGTGTGAGGTCCTCTGCTGAGAGAAGTTTCCTAATCCTTAAGAGGCTC ATTTCATCCTGCATCCAGTGAGATTTCCAATTGCCCTCCTTCTTTGCCCTCATTAAAAGACCCA TTCTGCCTCCATTAGGGCGACCTTCCTTGCTTTGTA
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Additional Information
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