Ap2m1 (adaptor related protein complex 2 subunit mu 1) - Rat Genome Database

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Gene: Ap2m1 (adaptor related protein complex 2 subunit mu 1) Ictidomys tridecemlineatus
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Symbol: Ap2m1
Name: adaptor related protein complex 2 subunit mu 1
RGD ID: 12727435
Description: ENCODES a protein that exhibits disordered domain specific binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); signal sequence binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of protein localization to plasma membrane (ortholog); positive regulation of receptor internalization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH autistic disorder (ortholog); Autosomal Dominant Mental Retardation 60 (ortholog); Currarino syndrome (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: adaptor related protein complex 2 mu 1 subunit; AP-2 complex subunit mu
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602119,588,894 - 119,599,828 (-)NCBI
SpeTri2.0NW_0049365785,680,748 - 5,691,666 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Ap2m1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602119,588,894 - 119,599,828 (-)NCBI
SpeTri2.0NW_0049365785,680,748 - 5,691,666 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AP2M1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3184,174,689 - 184,184,091 (+)EnsemblGRCh38hg38GRCh38
GRCh383184,174,855 - 184,184,091 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh373183,892,643 - 183,901,879 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363185,375,328 - 185,384,573 (+)NCBINCBI36hg18NCBI36
Build 343185,375,357 - 185,384,580NCBI
Celera3182,334,345 - 182,343,591 (+)NCBI
Cytogenetic Map3q27.1NCBI
HuRef3181,299,526 - 181,308,773 (+)NCBIHuRef
CHM1_13183,857,039 - 183,866,284 (+)NCBICHM1_1
Ap2m1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391620,354,230 - 20,363,659 (+)NCBIGRCm39mm39
GRCm39 Ensembl1620,354,228 - 20,363,659 (+)Ensembl
GRCm381620,535,480 - 20,544,909 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1620,535,478 - 20,544,909 (+)EnsemblGRCm38mm10GRCm38
MGSCv371620,535,577 - 20,544,126 (+)NCBIGRCm37mm9NCBIm37
MGSCv361620,449,047 - 20,457,596 (+)NCBImm8
Celera1621,099,579 - 21,108,128 (+)NCBICelera
Cytogenetic Map16A3NCBI
Ap2m1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21180,355,307 - 80,364,218 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl1184,041,184 - 84,047,546 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01184,041,184 - 84,047,542 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01187,113,496 - 87,119,854 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41182,585,474 - 82,591,832 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11182,643,062 - 82,649,421 (-)NCBI
Celera1179,194,852 - 79,201,210 (-)NCBICelera
Cytogenetic Map11q23NCBI
Ap2m1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542023,281,720 - 23,290,430 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542023,281,720 - 23,290,430 (-)NCBIChiLan1.0ChiLan1.0
AP2M1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13189,692,898 - 189,702,261 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3189,692,898 - 189,702,261 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03181,210,045 - 181,219,327 (+)NCBIMhudiblu_PPA_v0panPan3
AP2M1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13417,071,199 - 17,080,445 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3417,071,235 - 17,080,445 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3421,158,482 - 21,167,628 (+)NCBI
ROS_Cfam_1.03416,979,339 - 16,988,512 (+)NCBI
UMICH_Zoey_3.13417,016,696 - 17,025,849 (+)NCBI
UNSW_CanFamBas_1.03417,012,627 - 17,021,768 (+)NCBI
UU_Cfam_GSD_1.03417,242,835 - 17,251,997 (+)NCBI
AP2M1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13122,089,938 - 122,104,805 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113122,094,375 - 122,103,408 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213131,534,147 - 131,543,179 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AP2M1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1155,242,025 - 5,251,272 (-)NCBI
Vero_WHO_p1.0NW_02366606314,021,045 - 14,030,446 (-)NCBI
Ap2m1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473072,386,376 - 72,395,392 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005331058   ⟹   XP_005331115
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602119,588,894 - 119,599,828 (-)NCBI
SpeTri2.0NW_0049365785,680,748 - 5,691,666 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040270208   ⟹   XP_040126142
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602119,588,894 - 119,599,828 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005331115 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126142 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3271182 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005331115   ⟸   XM_005331058
- Peptide Label: isoform X2
- UniProtKB: I3MBC0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040126142   ⟸   XM_040270208
- Peptide Label: isoform X1
Protein Domains
MHD


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000008273 ENTREZGENE
Ensembl Protein ENSSTOP00000007414 ENTREZGENE
NCBI Gene Ap2m1 ENTREZGENE
UniProt I3MBC0 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-01 Ap2m1  adaptor related protein complex 2 subunit mu 1    adaptor related protein complex 2 mu 1 subunit  Symbol and/or name change 5135510 APPROVED