Gpr89a (G protein-coupled receptor 89A) - Rat Genome Database

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Gene: Gpr89a (G protein-coupled receptor 89A) Ictidomys tridecemlineatus
Analyze
Symbol: Gpr89a
Name: G protein-coupled receptor 89A
RGD ID: 12716876
Description: ENCODES a protein that exhibits voltage-gated anion channel activity (ortholog); INVOLVED IN intracellular pH reduction (ortholog); positive regulation of I-kappaB kinase/NF-kappaB signaling (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); parathyroid carcinoma (ortholog); schizophrenia (ortholog); FOUND IN Golgi cisterna membrane (ortholog); Golgi-associated vesicle membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Golgi pH regulator A
RGD Orthologs
Human
Chinchilla
Bonobo
Dog
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505820,512,697 - 20,550,016 (+)NCBI
SpeTri2.0NW_004936867388,801 - 426,135 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Gpr89a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505820,512,697 - 20,550,016 (+)NCBI
SpeTri2.0NW_004936867388,801 - 426,135 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR89A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381145,607,988 - 145,670,650 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1145,607,988 - 145,670,650 (+)EnsemblGRCh38hg38GRCh38
GRCh371145,764,409 - 145,827,075 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361144,475,952 - 144,538,460 (-)NCBINCBI36hg18NCBI36
Cytogenetic Map1q21.1NCBI
HuRef1119,759,435 - 119,775,205 (-)NCBIHuRef
HuRef1119,728,394 - 119,730,898 (-)NCBIHuRef
CHM1_11146,976,086 - 147,038,590 (+)NCBICHM1_1
T2T-CHM13v2.01144,724,765 - 144,787,440 (+)NCBI
Gpr89a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955568436,817 - 493,188 (-)NCBIChiLan1.0ChiLan1.0
GPR89A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11113,516,654 - 113,579,111 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01122,092,157 - 122,154,820 (-)NCBIMhudiblu_PPA_v0panPan3
GPR89A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11758,436,920 - 58,498,082 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1757,905,268 - 57,966,437 (+)NCBI
ROS_Cfam_1.01759,433,572 - 59,494,762 (+)NCBI
ROS_Cfam_1.0 Ensembl1759,433,610 - 59,494,760 (+)Ensembl
UMICH_Zoey_3.11758,306,607 - 58,367,771 (+)NCBI
UNSW_CanFamBas_1.01758,367,273 - 58,428,831 (+)NCBI
UU_Cfam_GSD_1.01759,093,986 - 59,155,136 (+)NCBI
GPR89A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12013,076,475 - 13,134,144 (-)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603815,756,182 - 15,814,064 (-)NCBIVero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005341309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005341309   ⟹   XP_005341366
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440505820,512,697 - 20,550,016 (+)NCBI
SpeTri2.0NW_004936867388,801 - 426,135 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005341366 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3281394 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005341366   ⟸   XM_005341309
- UniProtKB: A0A287CT21 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
ABA_GPCR   GPHR_N


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000010189 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000009145.3 UniProtKB/TrEMBL
  ENSSTOP00000024413 ENTREZGENE
  ENSSTOP00000024413.1 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000010192.3 UniProtKB/TrEMBL
  ENSSTOT00000032767.1 UniProtKB/TrEMBL
InterPro ABA_GPCR_dom UniProtKB/TrEMBL
  Golgi_pH-regulator_cons_dom UniProtKB/TrEMBL
  GPHR/GTG UniProtKB/TrEMBL
NCBI Gene Gpr89a ENTREZGENE
PANTHER PTHR15948 UniProtKB/TrEMBL
Pfam ABA_GPCR UniProtKB/TrEMBL
  GPHR_N UniProtKB/TrEMBL
UniProt A0A287CT21 ENTREZGENE, UniProtKB/TrEMBL
  I3MF07_ICTTR UniProtKB/TrEMBL