Cfap251 (cilia and flagella associated protein 251) - Rat Genome Database

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Gene: Cfap251 (cilia and flagella associated protein 251) Ictidomys tridecemlineatus
Analyze
Symbol: Cfap251
Name: cilia and flagella associated protein 251
RGD ID: 12715027
Description: INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); genetic disease (ortholog); spermatogenic failure 18 (ortholog); FOUND IN sperm flagellum (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cilia- and flagella-associated protein 251; WD repeat domain 66; WD repeat-containing protein 66; Wdr66
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118156,984,073 - 157,054,853 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365582,425,768 - 2,493,311 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Cfap251
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118156,984,073 - 157,054,853 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365582,425,768 - 2,493,311 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CFAP251
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812121,918,592 - 122,003,919 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12121,918,592 - 122,003,927 (+)EnsemblGRCh38hg38GRCh38
GRCh3712122,356,498 - 122,441,825 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612120,840,863 - 120,926,216 (+)NCBINCBI36Build 36hg18NCBI36
Celera12121,994,080 - 122,079,717 (+)NCBICelera
Cytogenetic Map12q24.31NCBI
HuRef12119,367,672 - 119,452,466 (+)NCBIHuRef
CHM1_112122,324,103 - 122,410,177 (+)NCBICHM1_1
T2T-CHM13v2.012121,914,890 - 121,999,723 (+)NCBIT2T-CHM13v2.0
Cfap251
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395123,390,196 - 123,465,547 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5123,390,165 - 123,465,547 (+)EnsemblGRCm39 Ensembl
GRCm385123,251,725 - 123,327,484 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5123,252,102 - 123,327,484 (+)EnsemblGRCm38mm10GRCm38
MGSCv375123,703,814 - 123,776,796 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365123,514,474 - 123,587,415 (+)NCBIMGSCv36mm8
Celera5120,343,011 - 120,414,271 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map562.86NCBI
Cfap251
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81238,923,154 - 38,997,881 (-)NCBIGRCr8
mRatBN7.21233,261,622 - 33,337,028 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1233,261,476 - 33,293,932 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01238,708,915 - 38,781,598 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1238,709,595 - 38,782,010 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01240,585,369 - 40,665,951 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41234,412,943 - 34,462,175 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1234,948,969 - 35,015,913 (-)NCBICelera
Cytogenetic Map12q16NCBI
Cfap251
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554826,509,281 - 6,553,835 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554826,508,563 - 6,553,561 (-)NCBIChiLan1.0ChiLan1.0
CFAP251
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210130,006,067 - 130,092,242 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112130,001,379 - 130,088,655 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012119,519,423 - 119,605,434 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112122,888,236 - 122,972,582 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12122,888,236 - 122,972,582 (+)Ensemblpanpan1.1panPan2
CFAP251
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1267,308,893 - 7,375,133 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl267,308,902 - 7,375,376 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha267,468,407 - 7,535,343 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0267,559,844 - 7,626,800 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl267,559,853 - 7,625,745 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1267,491,686 - 7,558,984 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0267,582,516 - 7,649,410 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0267,538,433 - 7,605,368 (-)NCBIUU_Cfam_GSD_1.0
CFAP251
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1430,699,660 - 30,792,743 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11430,712,538 - 30,792,865 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21432,517,698 - 32,598,018 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CFAP251
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111117,280,921 - 117,356,668 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666136105,307 - 187,374 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cfap251
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474722,249,655 - 22,299,955 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474722,248,676 - 22,295,733 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_040290953   ⟹   XP_040146887
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118156,984,073 - 157,054,853 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040146887 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3279086 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_040146887   ⟸   XM_040290953


Additional Information

Database Acc Id Source(s)
NCBI Gene Wdr66 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-03-25 Cfap251  cilia and flagella associated protein 251  Wdr66  WD repeat domain 66  Symbol and/or name change 5135510 APPROVED