Ttk (TTK protein kinase) - Rat Genome Database

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Gene: Ttk (TTK protein kinase) Ictidomys tridecemlineatus
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Symbol: Ttk
Name: TTK protein kinase
RGD ID: 12710118
Description: ENCODES a protein that exhibits identical protein binding (ortholog); kinetochore binding (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN female meiosis chromosome segregation (ortholog); meiotic spindle assembly checkpoint signaling (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); Pancreatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); kinetochore (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: dual specificity protein kinase TTK; TTK protein kinase, transcript variant X1; TTK protein kinase, transcript variant X2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494676,256,203 - 76,303,738 (+)NCBI
SpeTri2.0NW_00493651010,176,968 - 10,213,483 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
Ttk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494676,256,203 - 76,303,738 (+)NCBI
SpeTri2.0NW_00493651010,176,968 - 10,213,483 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TTK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl680,003,887 - 80,042,527 (+)EnsemblGRCh38hg38GRCh38
GRCh38680,004,147 - 80,042,651 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37680,714,366 - 80,752,244 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36680,771,078 - 80,808,958 (+)NCBINCBI36hg18NCBI36
Build 34680,771,077 - 80,808,956NCBI
Celera681,132,293 - 81,170,226 (+)NCBI
Cytogenetic Map6q14.1NCBI
HuRef677,937,044 - 77,974,979 (+)NCBIHuRef
CHM1_1680,811,776 - 80,849,705 (+)NCBICHM1_1
Ttk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39983,716,704 - 83,754,443 (+)NCBIGRCm39mm39
GRCm39 Ensembl983,716,742 - 83,754,442 (+)Ensembl
GRCm38983,834,651 - 83,872,390 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl983,834,689 - 83,872,389 (+)EnsemblGRCm38mm10GRCm38
MGSCv37983,728,296 - 83,765,997 (+)NCBIGRCm37mm9NCBIm37
MGSCv36983,631,459 - 83,669,102 (+)NCBImm8
Celera980,934,680 - 80,972,688 (+)NCBICelera
Cytogenetic Map9E2NCBI
Ttk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2884,754,329 - 84,792,653 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl884,754,315 - 84,792,651 (+)Ensembl
Rnor_6.0891,368,065 - 91,405,995 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl891,368,111 - 91,405,993 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0890,886,724 - 90,924,327 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4888,906,665 - 88,944,613 (+)NCBIRGSC3.4rn4RGSC3.4
Celera884,402,963 - 84,441,218 (+)NCBICelera
Cytogenetic Map8q31NCBI
Ttk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555027,824,194 - 7,866,879 (+)NCBIChiLan1.0ChiLan1.0
TTK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1681,158,143 - 81,196,478 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl681,158,143 - 81,196,478 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0677,887,382 - 77,925,737 (+)NCBIMhudiblu_PPA_v0panPan3
TTK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11240,915,733 - 40,959,423 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1240,915,439 - 40,957,279 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1240,787,409 - 40,829,802 (+)NCBI
ROS_Cfam_1.01241,678,975 - 41,721,444 (+)NCBI
UMICH_Zoey_3.11240,992,362 - 41,034,814 (+)NCBI
UNSW_CanFamBas_1.01240,969,244 - 41,011,626 (+)NCBI
UU_Cfam_GSD_1.01241,120,015 - 41,162,453 (+)NCBI
TTK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl186,076,583 - 86,125,718 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1186,076,576 - 86,125,334 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2196,781,685 - 96,828,277 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TTK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1134,738,849 - 4,779,563 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl134,738,959 - 4,780,627 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666040180,959,238 - 181,026,938 (+)NCBIVero_WHO_p1.0
Ttk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248196,631,697 - 6,682,181 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021726069   ⟹   XP_021581744
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494676,256,203 - 76,294,086 (+)NCBI
SpeTri2.0NW_00493651010,176,968 - 10,213,483 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021726070   ⟹   XP_021581745
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494676,256,203 - 76,294,086 (+)NCBI
SpeTri2.0NW_00493651010,176,968 - 10,213,483 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040282985   ⟹   XP_040138919
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494676,256,203 - 76,303,738 (+)NCBI
RefSeq Acc Id: XM_040282986   ⟹   XP_040138920
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494676,256,530 - 76,303,738 (+)NCBI
RefSeq Acc Id: XM_040282987   ⟹   XP_040138921
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494676,256,379 - 76,303,738 (+)NCBI
RefSeq Acc Id: XM_040282988   ⟹   XP_040138922
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494676,256,203 - 76,303,738 (+)NCBI
RefSeq Acc Id: XM_040282989   ⟹   XP_040138923
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494676,258,283 - 76,303,738 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_021581745   ⟸   XM_021726070
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_021581744   ⟸   XM_021726069
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_040138919   ⟸   XM_040282985
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040138922   ⟸   XM_040282988
- Peptide Label: isoform X2
RefSeq Acc Id: XP_040138921   ⟸   XM_040282987
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040138920   ⟸   XM_040282986
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040138923   ⟸   XM_040282989
- Peptide Label: isoform X5


Additional Information

Database Acc Id Source(s)
NCBI Gene Ttk ENTREZGENE