Itk (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024407213 | 107,441,822 - 107,503,029 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936515 | 5,891,828 - 5,952,458 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936515 | 5,891,873 - 5,952,400 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ITK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 157,180,840 - 157,255,185 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 157,142,933 - 157,255,185 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 156,607,851 - 156,682,195 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 156,540,485 - 156,614,687 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 156,540,484 - 156,614,687 | NCBI | | | | | Celera | 5 | 152,634,440 - 152,708,658 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q33.3 | NCBI | | | | | HuRef | 5 | 151,695,940 - 151,769,767 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 156,040,619 - 156,114,765 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 157,699,782 - 157,774,113 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Itk (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 46,215,975 - 46,280,342 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 46,215,977 - 46,280,342 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 46,325,148 - 46,389,515 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 46,325,150 - 46,389,515 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 46,138,652 - 46,203,017 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 46,168,576 - 46,232,923 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 50,911,124 - 50,975,428 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | B1.1 | NCBI | | | | | cM Map | 11 | 27.75 | NCBI | | | | |
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Itk (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 10 | 31,254,667 - 31,316,004 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 30,753,344 - 30,814,685 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 30,753,344 - 30,814,685 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 35,480,495 - 35,541,820 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 4,018,954 - 4,080,268 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 30,455,134 - 30,516,447 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 31,431,820 - 31,493,413 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 31,431,809 - 31,493,419 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 31,248,181 - 31,308,814 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 31,455,982 - 31,518,075 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 10 | 31,457,025 - 31,519,124 (-) | NCBI | | | | | Celera | 10 | 30,205,244 - 30,266,599 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | q21 | NCBI | | | | |
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Itk (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955408 | 11,387,589 - 11,448,199 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955408 | 11,387,595 - 11,447,896 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ITK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 4 | 152,364,876 - 152,450,621 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 150,504,423 - 150,590,168 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 152,582,125 - 152,656,211 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 159,204,016 - 159,277,689 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 159,204,016 - 159,277,689 (+) | Ensembl | panpan1.1 | | panPan2 | |
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ITK (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 4 | 52,902,886 - 52,966,465 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 52,902,871 - 52,966,542 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 52,795,128 - 52,858,373 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 53,339,439 - 53,402,778 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 53,340,020 - 53,402,842 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 53,165,818 - 53,229,419 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 53,272,737 - 53,336,070 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 53,789,682 - 53,852,963 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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ITK (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 16 | 66,010,772 - 66,082,185 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 16 | 66,010,766 - 66,082,263 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 16 | 71,884,821 - 71,940,522 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ITK (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 23 | 59,575,113 - 59,650,166 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 23 | 59,575,179 - 59,650,559 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666034 | 17,980,495 - 18,055,594 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Itk (Heterocephalus glaber - naked mole-rat) |
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