LOC101963479 (dipeptidase 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: LOC101963479 (dipeptidase 2) Ictidomys tridecemlineatus
Analyze
Symbol: LOC101963479 (Ensembl: DPEP2)
Name: dipeptidase 2
RGD ID: 12706783
Description: ENCODES a protein that exhibits dipeptidase activity (inferred); exopeptidase activity (inferred); hydrolase activity (inferred); INVOLVED IN leukotriene D4 catabolic process (inferred); leukotriene metabolic process (inferred); proteolysis (inferred); FOUND IN membrane (inferred); side of membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Dpep2
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934941,248,315 - 41,255,643 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647518,333,579 - 18,348,640 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647518,333,523 - 18,339,248 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000030798   ⟹   ENSSTOP00000028605
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647518,333,590 - 18,348,640 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000036194   ⟹   ENSSTOP00000025418
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647518,333,579 - 18,339,248 (-)Ensembl
RefSeq Acc Id: XM_005318500   ⟹   XP_005318557
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934941,248,315 - 41,255,643 (+)NCBI
SpeTri2.0NW_00493647518,333,523 - 18,339,248 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040279318   ⟹   XP_040135252
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934941,250,670 - 41,255,643 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005318557 (Get FASTA)   NCBI Sequence Viewer  
  XP_040135252 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000025418.1
  ENSSTOP00000028605.1
GenBank Protein KAG3256995 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005318557   ⟸   XM_005318500
- UniProtKB: A0A287CVX2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040135252   ⟸   XM_040279318
- UniProtKB: A0A287CVX2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000025418   ⟸   ENSSTOT00000036194
RefSeq Acc Id: ENSSTOP00000028605   ⟸   ENSSTOT00000030798


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000031323 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000030798.1 UniProtKB/TrEMBL
  ENSSTOT00000036194.1 UniProtKB/TrEMBL
Gene3D-CATH Metal-dependent hydrolases UniProtKB/TrEMBL
InterPro Dipep_AS UniProtKB/TrEMBL
  Metal_Hydrolase UniProtKB/TrEMBL
  Pept_M19 UniProtKB/TrEMBL
NCBI Gene LOC101963479 ENTREZGENE
PANTHER DIPEPTIDASE 2 UniProtKB/TrEMBL
  PTHR10443 UniProtKB/TrEMBL
Pfam Peptidase_M19 UniProtKB/TrEMBL
PROSITE RENAL_DIPEPTIDASE_1 UniProtKB/TrEMBL
  RENAL_DIPEPTIDASE_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF51556 UniProtKB/TrEMBL
UniProt A0A287CVX2 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D519_ICTTR UniProtKB/TrEMBL