Cep131 (centrosomal protein 131) - Rat Genome Database

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Gene: Cep131 (centrosomal protein 131) Ictidomys tridecemlineatus
Analyze
Symbol: Cep131
Name: centrosomal protein 131
RGD ID: 12701627
Description: ENCODES a protein that exhibits protein homodimerization activity (inferred); protein-containing complex binding (inferred); INVOLVED IN intraciliary transport (ortholog); intramanchette transport (ortholog); manchette assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal vesicle (inferred); centriolar satellite (inferred); centrosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 5-azacytidine induced 1; Azi1; centrosomal protein of 131 kDa
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056021,473,599 - 1,499,879 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365944,914,358 - 4,938,394 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365944,914,174 - 4,938,364 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Cep131
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056021,473,599 - 1,499,879 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365944,914,358 - 4,938,394 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365944,914,174 - 4,938,364 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP131
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381781,189,596 - 81,222,965 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1781,189,593 - 81,222,999 (-)EnsemblGRCh38hg38GRCh38
GRCh371779,163,396 - 79,196,765 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361776,777,988 - 76,811,346 (-)NCBINCBI36Build 36hg18NCBI36
Celera1775,792,729 - 75,827,295 (-)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1774,599,342 - 74,633,154 (-)NCBIHuRef
CHM1_11779,249,620 - 79,282,690 (-)NCBICHM1_1
T2T-CHM13v2.01782,097,947 - 82,132,127 (-)NCBIT2T-CHM13v2.0
Cep131
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911119,955,247 - 119,977,684 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11119,955,256 - 119,977,653 (-)EnsemblGRCm39 Ensembl
GRCm3811120,064,429 - 120,086,865 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11120,064,430 - 120,086,827 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711119,925,744 - 119,948,141 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611119,880,525 - 119,902,908 (-)NCBIMGSCv36mm8
Celera11131,799,847 - 131,822,459 (-)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1183.96NCBI
Cep131
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810105,844,433 - 105,868,811 (-)NCBIGRCr8
mRatBN7.210105,346,015 - 105,370,380 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10105,346,015 - 105,370,380 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10110,450,308 - 110,474,769 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010109,913,339 - 109,937,800 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010105,266,560 - 105,290,924 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010109,243,240 - 109,267,636 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10109,243,039 - 109,267,500 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010108,841,399 - 108,865,764 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410109,475,085 - 109,499,448 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110109,489,800 - 109,510,705 (-)NCBI
Celera10103,891,245 - 103,915,774 (-)NCBICelera
Cytogenetic Map10q32.3NCBI
Cep131
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555061,783,689 - 1,809,653 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555061,783,717 - 1,809,665 (+)NCBIChiLan1.0ChiLan1.0
CEP131
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21997,768,507 - 97,802,598 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan117102,668,109 - 102,702,365 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01775,614,593 - 75,648,730 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11781,343,396 - 81,376,891 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1781,343,396 - 81,376,891 (-)Ensemblpanpan1.1panPan2
CEP131
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.19866,384 - 883,141 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl9866,378 - 883,103 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha91,483,025 - 1,497,518 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.091,474,827 - 1,489,314 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl91,472,479 - 1,489,573 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.191,498,745 - 1,513,229 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.091,624,529 - 1,639,005 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.091,704,739 - 1,719,234 (+)NCBIUU_Cfam_GSD_1.0
CEP131
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl121,538,326 - 1,556,929 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1121,537,900 - 1,556,931 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2121,444,321 - 1,462,482 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CEP131
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11673,138,784 - 73,172,677 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1673,139,683 - 73,170,339 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607744,510,938 - 44,545,691 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cep131
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480110,226,629 - 10,248,829 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480110,212,489 - 10,251,015 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000004905   ⟹   ENSSTOP00000004399
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365944,914,358 - 4,938,394 (-)Ensembl
RefSeq Acc Id: XM_040268355   ⟹   XP_040124289
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244056021,473,614 - 1,497,785 (+)NCBI
RefSeq Acc Id: XM_040268356   ⟹   XP_040124290
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244056021,473,599 - 1,497,785 (+)NCBI
RefSeq Acc Id: XM_040268357   ⟹   XP_040124291
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244056021,473,614 - 1,497,785 (+)NCBI
RefSeq Acc Id: XR_005726130
Type: NON-CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244056021,473,614 - 1,499,879 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040124289 (Get FASTA)   NCBI Sequence Viewer  
  XP_040124290 (Get FASTA)   NCBI Sequence Viewer  
  XP_040124291 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000004399.3
Reference Protein Sequences
RefSeq Acc Id: XP_040124290   ⟸   XM_040268356
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040124289   ⟸   XM_040268355
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040124291   ⟸   XM_040268357
- Peptide Label: isoform X2
- UniProtKB: I3M533 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000004399   ⟸   ENSSTOT00000004905


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000004884 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000004905.3 UniProtKB/TrEMBL
InterPro CEP131 UniProtKB/TrEMBL
NCBI Gene Cep131 ENTREZGENE
PANTHER CENTROSOMAL PROTEIN OF 131 KDA UniProtKB/TrEMBL
  PTHR31540 UniProtKB/TrEMBL
UniProt I3M533 ENTREZGENE, UniProtKB/TrEMBL