Rmnd1 (required for meiotic nuclear division 1 homolog) - Rat Genome Database

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Gene: Rmnd1 (required for meiotic nuclear division 1 homolog) Ictidomys tridecemlineatus
Analyze
Symbol: Rmnd1
Name: required for meiotic nuclear division 1 homolog
RGD ID: 12700445
Description: INVOLVED IN positive regulation of mitochondrial translation (inferred); ASSOCIATED WITH Breast Neoplasms (ortholog); chromosome 6q24-q25 deletion syndrome (ortholog); combined oxidative phosphorylation deficiency 11 (ortholog); FOUND IN mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: required for meiotic nuclear division protein 1 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946137,047,815 - 137,092,010 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364894,298,328 - 4,343,969 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364894,299,810 - 4,343,996 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Rmnd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946137,047,815 - 137,092,010 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364894,298,328 - 4,343,969 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364894,299,810 - 4,343,996 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RMND1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386151,404,762 - 151,452,126 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6151,398,898 - 151,452,158 (-)EnsemblGRCh38hg38GRCh38
GRCh376151,725,897 - 151,773,261 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366151,767,682 - 151,815,009 (-)NCBINCBI36Build 36hg18NCBI36
Build 346151,818,103 - 151,865,373NCBI
Celera6152,459,873 - 152,507,180 (-)NCBICelera
Cytogenetic Map6q25.1NCBI
HuRef6149,288,185 - 149,335,348 (-)NCBIHuRef
CHM1_16151,990,047 - 152,037,461 (-)NCBICHM1_1
T2T-CHM13v2.06152,605,351 - 152,652,768 (-)NCBIT2T-CHM13v2.0
Rmnd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39104,353,168 - 4,382,583 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl104,351,915 - 4,382,388 (-)EnsemblGRCm39 Ensembl
GRCm38104,403,169 - 4,432,405 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl104,401,915 - 4,432,388 (-)EnsemblGRCm38mm10GRCm38
MGSCv37105,914,189 - 5,943,372 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36105,914,207 - 5,943,370 (+)NCBIMGSCv36mm8
Celera104,332,558 - 4,361,685 (-)NCBICelera
Cytogenetic Map10A1NCBI
cM Map102.06NCBI
Rmnd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8143,265,207 - 43,299,748 (-)NCBIGRCr8
mRatBN7.2140,859,829 - 40,894,376 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl140,859,829 - 40,894,314 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx141,387,690 - 41,411,278 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0147,374,892 - 47,398,474 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0141,463,223 - 41,486,772 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0140,948,843 - 40,982,669 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl140,948,847 - 40,972,826 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,291,016 - 42,324,868 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4135,114,371 - 35,132,050 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1135,099,374 - 35,146,560 (-)NCBI
Celera136,551,290 - 36,574,838 (-)NCBICelera
Cytogenetic Map1q11NCBI
Rmnd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495543910,151,357 - 10,193,765 (+)NCBIChiLan1.0ChiLan1.0
RMND1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25171,429,438 - 171,475,346 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16169,321,316 - 169,367,131 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06149,222,867 - 149,268,725 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16153,919,641 - 153,965,134 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6153,919,641 - 153,965,134 (-)Ensemblpanpan1.1panPan2
RMND1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1141,755,099 - 41,799,589 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl141,755,191 - 41,799,847 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha142,596,280 - 42,640,774 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0141,940,009 - 41,984,506 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl141,940,010 - 41,984,848 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1141,813,483 - 41,857,953 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0141,657,422 - 41,701,881 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0142,163,925 - 42,208,412 (-)NCBIUU_Cfam_GSD_1.0
RMND1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl114,795,674 - 14,855,069 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1114,795,632 - 14,852,026 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2117,218,981 - 17,262,700 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RMND1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11378,865,327 - 78,912,235 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1378,865,765 - 78,912,601 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604051,196,671 - 51,243,302 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rmnd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247856,822,268 - 6,857,035 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247856,814,901 - 6,856,643 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000013139   ⟹   ENSSTOP00000011778
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364894,298,328 - 4,343,969 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000031005   ⟹   ENSSTOP00000025266
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364894,300,277 - 4,311,747 (-)Ensembl
RefSeq Acc Id: XM_005321372   ⟹   XP_005321429
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404946137,047,815 - 137,092,010 (-)NCBI
SpeTri2.0NW_0049364894,299,810 - 4,343,996 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021723905   ⟹   XP_021579580
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404946137,047,815 - 137,092,003 (-)NCBI
SpeTri2.0NW_0049364894,299,810 - 4,343,996 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005321429 (Get FASTA)   NCBI Sequence Viewer  
  XP_021579580 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000011778.3
  ENSSTOP00000025266.1
GenBank Protein KAG3290451 (Get FASTA)   NCBI Sequence Viewer  
  KAG3290452 (Get FASTA)   NCBI Sequence Viewer  
  KAG3290453 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005321429   ⟸   XM_005321372
- UniProtKB: I3MKG4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021579580   ⟸   XM_021723905
- UniProtKB: I3MKG4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSTOP00000011778   ⟸   ENSSTOT00000013139
RefSeq Acc Id: ENSSTOP00000025266   ⟸   ENSSTOT00000031005
Protein Domains
DUF155


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000013141 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000013139.3 UniProtKB/TrEMBL
  ENSSTOT00000031005.1 UniProtKB/TrEMBL
InterPro DUF155 UniProtKB/TrEMBL
NCBI Gene Rmnd1 ENTREZGENE
PANTHER REQUIRED FOR MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG UniProtKB/TrEMBL
  REQUIRED FOR MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG UniProtKB/TrEMBL
Pfam DUF155 UniProtKB/TrEMBL
UniProt A0A287CVG1_ICTTR UniProtKB/TrEMBL
  I3MKG4 ENTREZGENE, UniProtKB/TrEMBL