Wls (Wnt ligand secretion mediator) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Wls (Wnt ligand secretion mediator) Ictidomys tridecemlineatus
Analyze
Symbol: Wls
Name: Wnt ligand secretion mediator
RGD ID: 12700395
Description: ENCODES a protein that exhibits identical protein binding (ortholog); mu-type opioid receptor binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); exocrine pancreas development (ortholog); hindbrain development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); intellectual disability (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); dendrite cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: protein wntless homolog; wntless homolog; wntless Wnt ligand secretion mediator
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365913,537,981 - 3,639,774 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Wls
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365913,537,981 - 3,639,774 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WLS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl168,098,473 - 68,233,120 (-)EnsemblGRCh38hg38GRCh38
GRCh38168,098,459 - 68,233,018 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37168,564,142 - 68,698,284 (-)NCBIGRCh37GRCh37hg19GRCh37
GRCh37168,564,142 - 68,698,229 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36168,336,739 - 68,470,841 (-)NCBINCBI36hg18NCBI36
Celera166,854,843 - 66,988,904 (-)NCBI
Cytogenetic Map1p31.3NCBI
HuRef166,674,244 - 66,808,306 (-)NCBIHuRef
CHM1_1168,679,493 - 68,813,680 (-)NCBICHM1_1
Wls
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393159,545,287 - 159,644,302 (+)NCBIGRCm39mm39
GRCm383159,839,650 - 159,938,666 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3159,839,672 - 159,938,664 (+)EnsemblGRCm38mm10GRCm38
MGSCv373159,502,659 - 159,598,042 (+)NCBIGRCm37mm9NCBIm37
MGSCv363159,775,030 - 159,871,126 (+)NCBImm8
Celera3166,277,256 - 166,372,735 (+)NCBICelera
Cytogenetic Map3H4NCBI
Wls
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22248,931,885 - 249,047,248 (+)NCBI
Rnor_6.0 Ensembl2266,315,036 - 266,432,558 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.02266,315,036 - 266,431,220 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02284,950,842 - 285,064,166 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42258,014,437 - 258,128,180 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12258,029,043 - 258,141,986 (+)NCBI
Celera2240,667,931 - 240,781,679 (+)NCBICelera
Cytogenetic Map2q45NCBI
Wls
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542323,374,401 - 23,466,475 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542323,374,401 - 23,465,308 (+)NCBIChiLan1.0ChiLan1.0
WLS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1169,291,878 - 69,425,652 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl169,318,742 - 69,425,652 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0167,336,009 - 67,470,265 (-)NCBIMhudiblu_PPA_v0panPan3
WLS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl677,053,237 - 77,317,761 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1677,053,242 - 77,146,549 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
WLS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6144,242,656 - 144,555,880 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16144,242,639 - 144,529,659 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26133,711,371 - 133,819,072 (+)NCBISscrofa10.2Sscrofa10.2susScr3
WLS
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12064,879,594 - 64,987,460 (+)NCBI
ChlSab1.1 Ensembl2064,879,864 - 64,977,038 (+)Ensembl
Wls
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474227,481,480 - 27,570,439 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005332358   ⟹   XP_005332415
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049365913,537,981 - 3,639,774 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005332415 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005332415   ⟸   XM_005332358
- UniProtKB: I3MB51 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000008145 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000007305 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000008155 ENTREZGENE, UniProtKB/TrEMBL
InterPro Wntless UniProtKB/TrEMBL
NCBI Gene Wls ENTREZGENE
PANTHER PTHR13449 UniProtKB/TrEMBL
UniProt I3MB51 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-11-29 Wls  Wnt ligand secretion mediator    wntless Wnt ligand secretion mediator  Symbol and/or name change 5135510 APPROVED