Ebf3 (EBF transcription factor 3)

Gene: Ebf3 (EBF transcription factor 3) Ictidomys tridecemlineatus

Analyze

Symbol:

Ebf3

Name:

EBF transcription factor 3

RGD ID:

12693240

Description:

ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); DNA-binding transcription factor activity (inferred); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Ataxia (ortholog); autism spectrum disorder (ortholog); choreatic disease (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

early B cell factor 3; early B-cell factor 3; early B-cell factor 3, transcript variant X1; early B-cell factor 3, transcript variant X2; early B-cell factor 3, transcript variant X3; early B-cell factor 3, transcript variant X4; early B-cell factor 3, transcript variant X5; early B-cell factor 3, transcript variant X6; early B-cell factor 3, transcript variant X7; early B-cell factor 3, transcript variant X8; early B-cell factor 3, transcript variant X9; transcription factor COE3

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	8,469,094 - 8,584,807 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	16,976,442 - 17,092,228 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	16,978,048 - 17,092,209 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Ataxia (ISO)

autism spectrum disorder (ISO)

choreatic disease (ISO)

Developmental Disabilities (ISO)

distal 10q deletion syndrome (ISO)

genetic disease (ISO)

hypotonia, ataxia, and delayed development syndrome (ISO)

intellectual disability (ISO)

Language Development Disorders (ISO)

Moebius syndrome (ISO)

Muscle Hypotonia (ISO)

Neurodevelopmental Disorders (ISO)

neurogenic bladder (ISO)

Weissenbacher-Zweymuller syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of DNA-templated transcription (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IEA)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IEA)

Cellular Component

nucleus (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA)

DNA-binding transcription factor activity (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Ebf3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	8,469,094 - 8,584,807 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	16,976,442 - 17,092,228 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	16,978,048 - 17,092,209 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EBF3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	129,835,233 - 129,964,274 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	129,835,233 - 129,973,053 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	131,633,497 - 131,762,538 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	131,523,537 - 131,652,081 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	10	125,305,470 - 125,434,003 (-)	NCBI		Celera
Cytogenetic Map	10	q26.3	NCBI
HuRef	10	125,212,114 - 125,349,388 (-)	NCBI		HuRef
CHM1_1	10	131,916,175 - 132,044,674 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	130,762,552 - 130,891,466 (-)	NCBI		T2T-CHM13v2.0

Ebf3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	136,795,400 - 136,924,528 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	136,795,402 - 136,916,174 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	137,193,671 - 137,322,805 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	137,193,673 - 137,314,445 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	144,385,354 - 144,506,128 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	137,032,064 - 137,152,788 (-)	NCBI		MGSCv36	mm8
Celera	7	137,016,552 - 137,137,034 (-)	NCBI		Celera
Cytogenetic Map	7	F3- F4	NCBI
cM Map	7	82.26	NCBI

Ebf3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	201,426,446 - 201,544,444 (-)	NCBI		GRCr8
mRatBN7.2	1	191,996,726 - 192,114,593 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	191,996,730 - 192,114,359 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	200,365,993 - 200,483,688 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	207,516,764 - 207,634,175 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	200,190,207 - 200,307,625 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	209,523,153 - 209,641,143 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	209,523,157 - 209,641,123 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	216,447,386 - 216,565,414 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	196,927,457 - 197,045,432 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	197,078,423 - 197,199,341 (-)	NCBI
Celera	1	189,703,632 - 189,821,535 (-)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

Ebf3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955477	7,434,482 - 7,556,504 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955477	7,435,324 - 7,557,212 (-)	NCBI	ChiLan1.0	ChiLan1.0

EBF3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	141,731,104 - 141,858,956 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	141,735,293 - 141,864,303 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	126,432,326 - 126,561,328 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	130,677,182 - 130,802,938 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

EBF3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	38,489,635 - 38,601,800 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	38,491,047 - 38,602,022 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	38,542,665 - 38,659,895 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	39,120,376 - 39,238,361 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	39,122,005 - 39,238,834 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	38,608,040 - 38,725,405 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	38,596,440 - 38,713,612 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	38,850,384 - 38,967,766 (-)	NCBI		UU_Cfam_GSD_1.0

EBF3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	138,819,848 - 138,935,462 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	138,819,846 - 138,935,504 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	150,935,557 - 151,051,854 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EBF3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	122,443,492 - 122,572,089 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666048	83,826,173 - 83,954,871 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ebf3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	17,078,683 - 17,201,536 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	17,069,676 - 17,201,481 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005320775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013356599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013356600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021723384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021723385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021723386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021723387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021723388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021723389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040272135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040272136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040272137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040272138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010002273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000006123 ⟹ ENSSTOP00000005478

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936486	16,976,442 - 17,092,228 (-)	Ensembl

RefSeq Acc Id:

XM_005320775 ⟹ XP_005320832

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,094 - 8,584,807 (+)	NCBI
SpeTri2.0	NW_004936486	16,978,048 - 17,092,209 (-)	NCBI

Sequence:

show sequence

CTCCCGCAGCGGCGTGGGGCTGGCGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGG
AAATCCAATTTCTTCCACTTCGTGCTGGCGCTCTACGACAGGCAGGGGCAGCCGGTGGAGATTG
AAAGAACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAGAGCCAAACAACGAGAAAACCAACAA
CGGTATCCACTATAAGCTCCAGCTACTATACAGTAACGGAGTCAGAACAGAGCAGGATCTGTAT
GTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTATGAGGGCCAGGACAAGAACCCGG
AGATGTGTCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAAAGTTG
TGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTCCTAAAGTTTTTC
CTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCTCGGGATATGCGGAGATTCCAGG
TTGTTGTATCGACAACAGTCAACGTGGACGGCCATGTGTTGGCCGTGTCCGACAACATGTTTGT
GCACAACAACTCCAAACACGGGCGGCGGGCCCGCCGCCTGGACCCGTCAGAAGCAACTCCGTGC
ATTAAGGCCATCAGTCCGAGTGAAGGCTGGACCACGGGGGGCGCCACCGTGATCATAATCGGAG
ACAACTTCTTTGACGGTCTACAAGTTGTGTTCGGAACTATGCTGGTGTGGAGTGAGCTGATAAC
GCCCCATGCCATCCGGGTGCAGACCCCGCCGCGGCACATCCCTGGAGTTGTCGAAGTCACCCTC
TCCTACAAGTCCAAGCAGTTCTGCAAAGGCGCTCCTGGGCGCTTCGTCTACACCGCCCTTAATG
AACCAACCATAGATTACGGCTTCCAGAGGTTGCAGAAAGTGATCCCCAGACATCCGGGTGATCC
CGAAAGGTTACCCAAGGAAGTGCTGCTTAAGAGGGCAGCGGACCTCGTGGAAGCCTTGTATGGG
ATGCCTCACAACAACCAGGAGATCATCCTGAAGCGAGCCGCCGACATTGCTGAGGCACTGTATA
GCGTGCCCCGCAATCACAACCAGATACCCACCCTGGGCAACACTCCGGCCCACACCGGCATGAT
GGGCGTGAATTCCTTCAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACATCGCAAGCCAACGAC
CAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGATACGTCCCCAGCAGTACTC
CCCAGCAGTCCAATTACAACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGC
CAATCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTCTCCCTACGGC
ATGAAACAGAAGAGCGCCTTCGCGCCTGTGGTCCGGCCCCAAGCCTCGCCGCCTCCCTCCTGCA
CCAGCGCCAACGGGAACGGACTGCAAGCTATGTCTGGGCTGGTAGTCCCGCCCATGTGAGGGAC
TCTAGTTTACCTTGCGCAGCACCCAGCATCCCAGGACGGACTTCAGGGGACACGTGTAGTATGT
TAAGACATGCTGAGGAAACTATCTTCAAAAAATCAGCAGCAGTTGAAACGCTACAAAAGACATT
GTTCAAAGATTTTATTTAAACTATGAAGAATCGACATGCAACCCACCTGCTCCTTCATGAACAG
TTCCATCTGGCTGACTGAACTCTCTCATGTTTCCACACTTCTCAGTCCTGAAGAAGGAGGAAAG
CAAAGCAGCGCCTATTTTGTATAAAGTTTCTGACTCCGTCTTGGCTGTGTAGTGCTATCTGTGT
GGAGAAACTTCATGAATGCACCATTTTGATGACCATGACACACAGGAAAAATGCCTCTGGACAT
TTTTCTGTACTCATACTTAGATTCACAATGGTTGTGTATCTCTATAATGTGAAATATTTTTTTG
TGGTGAAAAAAGGGGGCCAAGGAGGTATGAGCCATCAAACTGGAACAGAGGATGACTACATGGT
TAGGAGAATCTGGGGTGGCCGGGAGGGAGGGAGGGTTGATCATTGCTTACCTTCATCTTAATGA
AACGAAACTTTGTAACTTATTGTAGTTAGAAATTGTAACTTTGATATTGAATTCTCTTGCCTTC
AACAAGCACACTGACAGAGAAAAGATGCTACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAG
AGCTTCCTGTTAAGCGAGTGCGGTCTGCAACATTTTTTCAACTTTTGCTAGCACTGTATACTAT
TGCATTCTTAGGCTACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAG
ATCCTTCTTCCCTGTGTTTTGTATGTGGTTATAAAATTGTAGACTTTTGTGATTTTGCCAAAGT
TGTAGCTAAATATTTATACACTTGTCTTGAATTTTTTTCAGATCCACTTAAATATTTAGAAAAA
TGAGTTTTTATTCCTTATGTGTCTTATAAGGGATAAAACGGTCTCCATCCAACACGTACTTTAC
CACGAACACTTGCAGTTGCTAAGGGACTTTATTTTGTAACATATCAATTATAAATATTGTATTT
ATCTTTGA

hide sequence

RefSeq Acc Id:

XM_013356599 ⟹ XP_013212053

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,097 - 8,584,807 (+)	NCBI
SpeTri2.0	NW_004936486	16,978,048 - 17,092,209 (-)	NCBI

Sequence:

show sequence

CTCCCGCAGCGGCGTGGGGCTGGCGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGG
AAATCCAATTTCTTCCACTTCGTGCTGGCGCTCTACGACAGGCAGGGGCAGCCGGTGGAGATTG
AAAGAACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAGAGCCAAACAACGAGAAAACCAACAA
CGGTATCCACTATAAGCTCCAGCTACTATACAGTAACGGAGTCAGAACAGAGCAGGATCTGTAT
GTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTATGAGGGCCAGGACAAGAACCCGG
AGATGTGTCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAAAGTTG
TGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTCCTAAAGTTTTTC
CTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCTCGGGATATGCGGAGATTCCAGG
TTGTTGTATCGACAACAGTCAACGTGGACGGCCATGTGTTGGCCGTGTCCGACAACATGTTTGT
GCACAACAACTCCAAACACGGGCGGCGGGCCCGCCGCCTGGACCCGTCAGAAGCAACTCCGTGC
ATTAAGGCCATCAGTCCGAGTGAAGGCTGGACCACGGGGGGCGCCACCGTGATCATAATCGGAG
ACAACTTCTTTGACGGTCTACAAGTTGTGTTCGGAACTATGCTGGTGTGGAGTGAGCTGATAAC
GCCCCATGCCATCCGGGTGCAGACCCCGCCGCGGCACATCCCTGGAGTTGTCGAAGTCACCCTC
TCCTACAAGTCCAAGCAGTTCTGCAAAGGCGCTCCTGGGCGCTTCGTCTACACCGCCCTTAATG
AACCAACCATAGATTACGGCTTCCAGAGGTTGCAGAAAGTGATCCCCAGACATCCGGGTGATCC
CGAAAGGTTACCCAAGGAAGTGCTGCTTAAGAGGGCAGCGGACCTCGTGGAAGCCTTGTATGGG
ATGCCTCACAACAACCAGGAGATCATCCTGAAGCGAGCCGCCGACATTGCTGAGGCACTGTATA
GCGTGCCCCGCAATCACAACCAGATACCCACCCTGGGCAACACTCCGGCCCACACCGGCATGAT
GGGCGTGAATTCCTTCAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACATCGCAAGCCAACGAC
CAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGATACGTCCCCAGCAGTACTC
CCCAGCAGTCCAATTACAACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGC
CAATCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTCTCCCTACGGC
ATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCA
CACACGGCATTTTCTCATTCTCACCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGCGCCTT
CGCGCCTGTGGTCCGGCCCCAAGCCTCGCCGCCTCCCTCCTGCACCAGCGCCAACGGGAACGGA
CTGCAAGGCTCTCTGCTGGGTGCTGAGGACGTAGCCGTGGAGAAGACAAACTGGCCCTTTTGTG
AAGTCGGTGGCATATTTCACTTTGATGAACTAATGCTCAAAAAAGGAACTGGAAAGCTATGTCT
GGGCTGGTAGTCCCGCCCATGTGAGGGACTCTAGTTTACCTTGCGCAGCACCCAGCATCCCAGG
ACGGACTTCAGGGGACACGTGTAGTATGTTAAGACATGCTGAGGAAACTATCTTCAAAAAATCA
GCAGCAGTTGAAACGCTACAAAAGACATTGTTCAAAGATTTTATTTAAACTATGAAGAATCGAC
ATGCAACCCACCTGCTCCTTCATGAACAGTTCCATCTGGCTGACTGAACTCTCTCATGTTTCCA
CACTTCTCAGTCCTGAAGAAGGAGGAAAGCAAAGCAGCGCCTATTTTGTATAAAGTTTCTGACT
CCGTCTTGGCTGTGTAGTGCTATCTGTGTGGAGAAACTTCATGAATGCACCATTTTGATGACCA
TGACACACAGGAAAAATGCCTCTGGACATTTTTCTGTACTCATACTTAGATTCACAATGGTTGT
GTATCTCTATAATGTGAAATATTTTTTTGTGGTGAAAAAAGGGGGCCAAGGAGGTATGAGCCAT
CAAACTGGAACAGAGGATGACTACATGGTTAGGAGAATCTGGGGTGGCCGGGAGGGAGGGAGGG
TTGATCATTGCTTACCTTCATCTTAATGAAACGAAACTTTGTAACTTATTGTAGTTAGAAATTG
TAACTTTGATATTGAATTCTCTTGCCTTCAACAAGCACACTGACAGAGAAAAGATGCTACTGTC
TGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCGAGTGCGGTCTGCAACATTT
TTTCAACTTTTGCTAGCACTGTATACTATTGCATTCTTAGGCTACTGTGAGGTCTATGTTTCTT
GTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTGTGTTTTGTATGTGGTTATAAA
ATTGTAGACTTTTGTGATTTTGCCAAAGTTGTAGCTAAATATTTATACACTTGTCTTGAATTTT
TTTCAGATCCACTTAAATATTTAGAAAAATGAGTTTTTATTCCTTATGTGTCTTATAAGGGATA
AAACGGTCTCCATCCAACACGTACTTTACCACGAACACTTGCAGTTGCTAAGGGACTTTATTTT
GTAACATATCAATTATAAATATTGTATTTATCTTTGA

hide sequence

RefSeq Acc Id:

XM_013356600 ⟹ XP_013212054

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,097 - 8,584,807 (+)	NCBI
SpeTri2.0	NW_004936486	16,979,015 - 17,092,209 (-)	NCBI

Sequence:

show sequence

CTCCCGCAGCGGCGTGGGGCTGGCGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGG
AAATCCAATTTCTTCCACTTCGTGCTGGCGCTCTACGACAGGCAGGGGCAGCCGGTGGAGATTG
AAAGAACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAGAGCCAAACAACGAGAAAACCAACAA
CGGTATCCACTATAAGCTCCAGCTACTATACAGTAACGGAGTCAGAACAGAGCAGGATCTGTAT
GTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTATGAGGGCCAGGACAAGAACCCGG
AGATGTGTCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAAAGTTG
TGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTCCTAAAGTTTTTC
CTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCTCGGGATATGCGGAGATTCCAGG
TTGTTGTATCGACAACAGTCAACGTGGACGGCCATGTGTTGGCCGTGTCCGACAACATGTTTGT
GCACAACAACTCCAAACACGGGCGGCGGGCCCGCCGCCTGGACCCGTCAGAAGCAACTCCGTGC
ATTAAGGCCATCAGTCCGAGTGAAGGCTGGACCACGGGGGGCGCCACCGTGATCATAATCGGAG
ACAACTTCTTTGACGGTCTACAAGTTGTGTTCGGAACTATGCTGGTGTGGAGTGAGCTGATAAC
GCCCCATGCCATCCGGGTGCAGACCCCGCCGCGGCACATCCCTGGAGTTGTCGAAGTCACCCTC
TCCTACAAGTCCAAGCAGTTCTGCAAAGGCGCTCCTGGGCGCTTCGTCTACACCGCCCTTAATG
AACCAACCATAGATTACGGCTTCCAGAGGTTGCAGAAAGTGATCCCCAGACATCCGGGTGATCC
CGAAAGGTTACCCAAGGAAGTGCTGCTTAAGAGGGCAGCGGACCTCGTGGAAGCCTTGTATGGG
ATGCCTCACAACAACCAGGAGATCATCCTGAAGCGAGCCGCCGACATTGCTGAGGCACTGTATA
GCGTGCCCCGCAATCACAACCAGATACCCACCCTGGGCAACACTCCGGCCCACACCGGCATGAT
GGGCGTGAATTCCTTCAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACATCGCAAGCCAACGAC
CAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGATACGTCCCCAGCAGTACTC
CCCAGCAGTCCAATTACAACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGC
CAATCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTCTCCCTACGGC
ATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCA
CACACGGCATTTTCTCATTCTCACCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGCGCCTT
CGCGCCTGTGGTCCGGCCCCAAGCCTCGCCGCCTCCCTCCTGCACCAGCGCCAACGGGAACGGA
CTGCAAGCTATGTCTGGGCTGGTAGTCCCGCCCATGTGAGGGACTCTAGTTTACCTTGCGCAGC
ACCCAGCATCCCAGGACGGACTTCAGGGGACACGTGTAGTATGTTAAGACATGCTGAGGAAACT
ATCTTCAAAAAATCAGCAGCAGTTGAAACGCTACAAAAGACATTG

hide sequence

RefSeq Acc Id:

XM_021723384 ⟹ XP_021579059

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,183 - 8,584,807 (+)	NCBI
SpeTri2.0	NW_004936486	16,978,048 - 17,091,670 (-)	NCBI

Sequence:

show sequence

AACAACGAGAAAACCAACAACGGTATCCACTATAAGCTCCAGCTACTATACAGTAACGGAGTCA
GAACAGAGCAGGATCTGTATGTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTATGA
GGGCCAGGACAAGAACCCGGAGATGTGTCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGG
TGCTGTGACAAGAAAAGTTGTGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACA
GATTCTTCCTAAAGTTTTTCCTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCTCG
GGATATGCGGAGATTCCAGGTTGTTGTATCGACAACAGTCAACGTGGACGGCCATGTGTTGGCC
GTGTCCGACAACATGTTTGTGCACAACAACTCCAAACACGGGCGGCGGGCCCGCCGCCTGGACC
CGTCAGAAGGTACGGCCCCTTCTTATCTGGAAAATGCAACTCCGTGCATTAAGGCCATCAGTCC
GAGTGAAGGCTGGACCACGGGGGGCGCCACCGTGATCATAATCGGAGACAACTTCTTTGACGGT
CTACAAGTTGTGTTCGGAACTATGCTGGTGTGGAGTGAGCTGATAACGCCCCATGCCATCCGGG
TGCAGACCCCGCCGCGGCACATCCCTGGAGTTGTCGAAGTCACCCTCTCCTACAAGTCCAAGCA
GTTCTGCAAAGGCGCTCCTGGGCGCTTCGTCTACACCGCCCTTAATGAACCAACCATAGATTAC
GGCTTCCAGAGGTTGCAGAAAGTGATCCCCAGACATCCGGGTGATCCCGAAAGGTTACCCAAGG
AAGTGCTGCTTAAGAGGGCAGCGGACCTCGTGGAAGCCTTGTATGGGATGCCTCACAACAACCA
GGAGATCATCCTGAAGCGAGCCGCCGACATTGCTGAGGCACTGTATAGCGTGCCCCGCAATCAC
AACCAGATACCCACCCTGGGCAACACTCCGGCCCACACCGGCATGATGGGCGTGAATTCCTTCA
GCAGCCAGCTAGCCGTCAACGTGTCAGAGACATCGCAAGCCAACGACCAAGTCGGCTACAGTCG
CAATACAAGCAGCGTGTCCCCGCGAGGATACGTCCCCAGCAGTACTCCCCAGCAGTCCAATTAC
AACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTG
GCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTCTCCCTACGGCATGCCGTCCAGCCCCAC
CATGGCAGCCTCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCACACACGGCATTTTCTCATTC
TCACCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGCGCCTTCGCGCCTGTGGTCCGGCCCC
AAGCCTCGCCGCCTCCCTCCTGCACCAGCGCCAACGGGAACGGACTGCAAGGCTCTCTGCTGGG
TGCTGAGGACGTAGCCGTGGAGAAGACAAACTGGCCCTTTTGTGAAGTCGGTGGCATATTTCAC
TTTGATGAACTAATGCTCAAAAAAGGAACTGGAAAGCTATGTCTGGGCTGGTAGTCCCGCCCAT
GTGAGGGACTCTAGTTTACCTTGCGCAGCACCCAGCATCCCAGGACGGACTTCAGGGGACACGT
GTAGTATGTTAAGACATGCTGAGGAAACTATCTTCAAAAAATCAGCAGCAGTTGAAACGCTACA
AAAGACATTGTTCAAAGATTTTATTTAAACTATGAAGAATCGACATGCAACCCACCTGCTCCTT
CATGAACAGTTCCATCTGGCTGACTGAACTCTCTCATGTTTCCACACTTCTCAGTCCTGAAGAA
GGAGGAAAGCAAAGCAGCGCCTATTTTGTATAAAGTTTCTGACTCCGTCTTGGCTGTGTAGTGC
TATCTGTGTGGAGAAACTTCATGAATGCACCATTTTGATGACCATGACACACAGGAAAAATGCC
TCTGGACATTTTTCTGTACTCATACTTAGATTCACAATGGTTGTGTATCTCTATAATGTGAAAT
ATTTTTTTGTGGTGAAAAAAGGGGGCCAAGGAGGTATGAGCCATCAAACTGGAACAGAGGATGA
CTACATGGTTAGGAGAATCTGGGGTGGCCGGGAGGGAGGGAGGGTTGATCATTGCTTACCTTCA
TCTTAATGAAACGAAACTTTGTAACTTATTGTAGTTAGAAATTGTAACTTTGATATTGAATTCT
CTTGCCTTCAACAAGCACACTGACAGAGAAAAGATGCTACTGTCTGTTGGTTCCAATATTCTCC
CACTGCTAGAGCTTCCTGTTAAGCGAGTGCGGTCTGCAACATTTTTTCAACTTTTGCTAGCACT
GTATACTATTGCATTCTTAGGCTACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTT
GACTTCTAGATCCTTCTTCCCTGTGTTTTGTATGTGGTTATAAAATTGTAGACTTTTGTGATTT
TGCCAAAGTTGTAGCTAAATATTTATACACTTGTCTTGAATTTTTTTCAGATCCACTTAAATAT
TTAGAAAAATGAGTTTTTATTCCTTATGTGTCTTATAAGGGATAAAACGGTCTCCATCCAACAC
GTACTTTACCACGAACACTTGCAGTTGCTAAGGGACTTTATTTTGTAACATATCAATTATAAAT
ATTGTATTTATCTTTGA

hide sequence

RefSeq Acc Id:

XM_021723385 ⟹ XP_021579060

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,097 - 8,584,807 (+)	NCBI
SpeTri2.0	NW_004936486	16,978,048 - 17,091,670 (-)	NCBI

Sequence:

show sequence

AACAACGAGAAAACCAACAACGGTATCCACTATAAGCTCCAGCTACTATACAGTAACGGAGTCA
GAACAGAGCAGGATCTGTATGTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTATGA
GGGCCAGGACAAGAACCCGGAGATGTGTCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGG
TGCTGTGACAAGAAAAGTTGTGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACA
GATTCTTCCTAAAGTTTTTCCTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCTCG
GGATATGCGGAGATTCCAGGTTGTTGTATCGACAACAGTCAACGTGGACGGCCATGTGTTGGCC
GTGTCCGACAACATGTTTGTGCACAACAACTCCAAACACGGGCGGCGGGCCCGCCGCCTGGACC
CGTCAGAAGGTACGGCCCCTTCTTATCTGGAAAATGCAACTCCGTGCATTAAGGCCATCAGTCC
GAGTGAAGGCTGGACCACGGGGGGCGCCACCGTGATCATAATCGGAGACAACTTCTTTGACGGT
CTACAAGTTGTGTTCGGAACTATGCTGGTGTGGAGTGAGCTGATAACGCCCCATGCCATCCGGG
TGCAGACCCCGCCGCGGCACATCCCTGGAGTTGTCGAAGTCACCCTCTCCTACAAGTCCAAGCA
GTTCTGCAAAGGCGCTCCTGGGCGCTTCGTCTACACCGCCCTTAATGAACCAACCATAGATTAC
GGCTTCCAGAGGTTGCAGAAAGTGATCCCCAGACATCCGGGTGATCCCGAAAGGTTACCCAAGG
AAGTGCTGCTTAAGAGGGCAGCGGACCTCGTGGAAGCCTTGTATGGGATGCCTCACAACAACCA
GGAGATCATCCTGAAGCGAGCCGCCGACATTGCTGAGGCACTGTATAGCGTGCCCCGCAATCAC
AACCAGATACCCACCCTGGGCAACACTCCGGCCCACACCGGCATGATGGGCGTGAATTCCTTCA
GCAGCCAGCTAGCCGTCAACGTGTCAGAGACATCGCAAGCCAACGACCAAGTCGGCTACAGTCG
CAATACAAGCAGCGTGTCCCCGCGAGGATACGTCCCCAGCAGTACTCCCCAGCAGTCCAATTAC
AACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTG
GCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTCTCCCTACGGCATGAAACAGAAGAGCGC
CTTCGCGCCTGTGGTCCGGCCCCAAGCCTCGCCGCCTCCCTCCTGCACCAGCGCCAACGGGAAC
GGACTGCAAGGCTCTCTGCTGGGTGCTGAGGACGTAGCCGTGGAGAAGACAAACTGGCCCTTTT
GTGAAGTCGGTGGCATATTTCACTTTGATGAACTAATGCTCAAAAAAGGAACTGGAAAGCTATG
TCTGGGCTGGTAGTCCCGCCCATGTGAGGGACTCTAGTTTACCTTGCGCAGCACCCAGCATCCC
AGGACGGACTTCAGGGGACACGTGTAGTATGTTAAGACATGCTGAGGAAACTATCTTCAAAAAA
TCAGCAGCAGTTGAAACGCTACAAAAGACATTGTTCAAAGATTTTATTTAAACTATGAAGAATC
GACATGCAACCCACCTGCTCCTTCATGAACAGTTCCATCTGGCTGACTGAACTCTCTCATGTTT
CCACACTTCTCAGTCCTGAAGAAGGAGGAAAGCAAAGCAGCGCCTATTTTGTATAAAGTTTCTG
ACTCCGTCTTGGCTGTGTAGTGCTATCTGTGTGGAGAAACTTCATGAATGCACCATTTTGATGA
CCATGACACACAGGAAAAATGCCTCTGGACATTTTTCTGTACTCATACTTAGATTCACAATGGT
TGTGTATCTCTATAATGTGAAATATTTTTTTGTGGTGAAAAAAGGGGGCCAAGGAGGTATGAGC
CATCAAACTGGAACAGAGGATGACTACATGGTTAGGAGAATCTGGGGTGGCCGGGAGGGAGGGA
GGGTTGATCATTGCTTACCTTCATCTTAATGAAACGAAACTTTGTAACTTATTGTAGTTAGAAA
TTGTAACTTTGATATTGAATTCTCTTGCCTTCAACAAGCACACTGACAGAGAAAAGATGCTACT
GTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCGAGTGCGGTCTGCAACA
TTTTTTCAACTTTTGCTAGCACTGTATACTATTGCATTCTTAGGCTACTGTGAGGTCTATGTTT
CTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTGTGTTTTGTATGTGGTTAT
AAAATTGTAGACTTTTGTGATTTTGCCAAAGTTGTAGCTAAATATTTATACACTTGTCTTGAAT
TTTTTTCAGATCCACTTAAATATTTAGAAAAATGAGTTTTTATTCCTTATGTGTCTTATAAGGG
ATAAAACGGTCTCCATCCAACACGTACTTTACCACGAACACTTGCAGTTGCTAAGGGACTTTAT
TTTGTAACATATCAATTATAAATATTGTATTTATCTTTGA

hide sequence

RefSeq Acc Id:

XM_021723386 ⟹ XP_021579061

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,097 - 8,584,807 (+)	NCBI
SpeTri2.0	NW_004936486	16,978,048 - 17,091,670 (-)	NCBI

Sequence:

show sequence

AACAACGAGAAAACCAACAACGGTATCCACTATAAGCTCCAGCTACTATACAGTAACGGAGTCA
GAACAGAGCAGGATCTGTATGTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTATGA
GGGCCAGGACAAGAACCCGGAGATGTGTCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGG
TGCTGTGACAAGAAAAGTTGTGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACA
GATTCTTCCTAAAGTTTTTCCTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCTCG
GGATATGCGGAGATTCCAGGTTGTTGTATCGACAACAGTCAACGTGGACGGCCATGTGTTGGCC
GTGTCCGACAACATGTTTGTGCACAACAACTCCAAACACGGGCGGCGGGCCCGCCGCCTGGACC
CGTCAGAAGGTACGGCCCCTTCTTATCTGGAAAATGCAACTCCGTGCATTAAGGCCATCAGTCC
GAGTGAAGGCTGGACCACGGGGGGCGCCACCGTGATCATAATCGGAGACAACTTCTTTGACGGT
CTACAAGTTGTGTTCGGAACTATGCTGGTGTGGAGTGAGCTGATAACGCCCCATGCCATCCGGG
TGCAGACCCCGCCGCGGCACATCCCTGGAGTTGTCGAAGTCACCCTCTCCTACAAGTCCAAGCA
GTTCTGCAAAGGCGCTCCTGGGCGCTTCGTCTACACCGCCCTTAATGAACCAACCATAGATTAC
GGCTTCCAGAGGTTGCAGAAAGTGATCCCCAGACATCCGGGTGATCCCGAAAGGTTACCCAAGG
AAGTGCTGCTTAAGAGGGCAGCGGACCTCGTGGAAGCCTTGTATGGGATGCCTCACAACAACCA
GGAGATCATCCTGAAGCGAGCCGCCGACATTGCTGAGGCACTGTATAGCGTGCCCCGCAATCAC
AACCAGATACCCACCCTGGGCAACACTCCGGCCCACACCGGCATGATGGGCGTGAATTCCTTCA
GCAGCCAGCTAGCCGTCAACGTGTCAGAGACATCGCAAGCCAACGACCAAGTCGGCTACAGTCG
CAATACAAGCAGCGTGTCCCCGCGAGGATACGTCCCCAGCAGTACTCCCCAGCAGTCCAATTAC
AACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTG
GCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTCTCCCTACGGCATGAAACAGAAGAGCGC
CTTCGCGCCTGTGGTCCGGCCCCAAGCCTCGCCGCCTCCCTCCTGCACCAGCGCCAACGGGAAC
GGACTGCAAGCTATGTCTGGGCTGGTAGTCCCGCCCATGTGAGGGACTCTAGTTTACCTTGCGC
AGCACCCAGCATCCCAGGACGGACTTCAGGGGACACGTGTAGTATGTTAAGACATGCTGAGGAA
ACTATCTTCAAAAAATCAGCAGCAGTTGAAACGCTACAAAAGACATTGTTCAAAGATTTTATTT
AAACTATGAAGAATCGACATGCAACCCACCTGCTCCTTCATGAACAGTTCCATCTGGCTGACTG
AACTCTCTCATGTTTCCACACTTCTCAGTCCTGAAGAAGGAGGAAAGCAAAGCAGCGCCTATTT
TGTATAAAGTTTCTGACTCCGTCTTGGCTGTGTAGTGCTATCTGTGTGGAGAAACTTCATGAAT
GCACCATTTTGATGACCATGACACACAGGAAAAATGCCTCTGGACATTTTTCTGTACTCATACT
TAGATTCACAATGGTTGTGTATCTCTATAATGTGAAATATTTTTTTGTGGTGAAAAAAGGGGGC
CAAGGAGGTATGAGCCATCAAACTGGAACAGAGGATGACTACATGGTTAGGAGAATCTGGGGTG
GCCGGGAGGGAGGGAGGGTTGATCATTGCTTACCTTCATCTTAATGAAACGAAACTTTGTAACT
TATTGTAGTTAGAAATTGTAACTTTGATATTGAATTCTCTTGCCTTCAACAAGCACACTGACAG
AGAAAAGATGCTACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCGA
GTGCGGTCTGCAACATTTTTTCAACTTTTGCTAGCACTGTATACTATTGCATTCTTAGGCTACT
GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTGTGT
TTTGTATGTGGTTATAAAATTGTAGACTTTTGTGATTTTGCCAAAGTTGTAGCTAAATATTTAT
ACACTTGTCTTGAATTTTTTTCAGATCCACTTAAATATTTAGAAAAATGAGTTTTTATTCCTTA
TGTGTCTTATAAGGGATAAAACGGTCTCCATCCAACACGTACTTTACCACGAACACTTGCAGTT
GCTAAGGGACTTTATTTTGTAACATATCAATTATAAATATTGTATTTATCTTTGA

hide sequence

RefSeq Acc Id:

XM_021723387 ⟹ XP_021579062

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,183 - 8,584,807 (+)	NCBI
SpeTri2.0	NW_004936486	16,978,048 - 17,091,670 (-)	NCBI

Sequence:

show sequence

AACAACGAGAAAACCAACAACGGTATCCACTATAAGCTCCAGCTACTATACAGTAACGGAGTCA
GAACAGAGCAGGATCTGTATGTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTATGA
GGGCCAGGACAAGAACCCGGAGATGTGTCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGG
TGCTGTGACAAGAAAAGTTGTGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACA
GATTCTTCCTAAAGTTTTTCCTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCTCG
GGATATGCGGAGATTCCAGGTTGTTGTATCGACAACAGTCAACGTGGACGGCCATGTGTTGGCC
GTGTCCGACAACATGTTTGTGCACAACAACTCCAAACACGGGCGGCGGGCCCGCCGCCTGGACC
CGTCAGAAGGTACGGCCCCTTCTTATCTGGAAAATGCAACTCCGTGCATTAAGGCCATCAGTCC
GAGTGAAGGCTGGACCACGGGGGGCGCCACCGTGATCATAATCGGAGACAACTTCTTTGACGGT
CTACAAGTTGTGTTCGGAACTATGCTGGTGTGGAGTGAGCTGATAACGCCCCATGCCATCCGGG
TGCAGACCCCGCCGCGGCACATCCCTGGAGTTGTCGAAGTCACCCTCTCCTACAAGTCCAAGCA
GTTCTGCAAAGGCGCTCCTGGGCGCTTCGTCTACACCGCCCTTAATGAACCAACCATAGATTAC
GGCTTCCAGAGGTTGCAGAAAGTGATCCCCAGACATCCGGGTGATCCCGAAAGGTTACCCAAGG
AAGTGCTGCTTAAGAGGGCAGCGGACCTCGTGGAAGCCTTGTATGGGATGCCTCACAACAACCA
GGAGATCATCCTGAAGCGAGCCGCCGACATTGCTGAGGCACTGTATAGCGTGCCCCGCAATCAC
AACCAGATACCCACCCTGGGCAACACTCCGGCCCACACCGGCATGATGGGCGTGAATTCCTTCA
GCAGCCAGCTAGCCGTCAACGTGTCAGAGACATCGCAAGCCAACGACCAAGTGAAACAGAAGAG
CGCCTTCGCGCCTGTGGTCCGGCCCCAAGCCTCGCCGCCTCCCTCCTGCACCAGCGCCAACGGG
AACGGACTGCAAGGCTCTCTGCTGGGTGCTGAGGACGTAGCCGTGGAGAAGACAAACTGGCCCT
TTTGTGAAGTCGGTGGCATATTTCACTTTGATGAACTAATGCTCAAAAAAGGAACTGGAAAGCT
ATGTCTGGGCTGGTAGTCCCGCCCATGTGAGGGACTCTAGTTTACCTTGCGCAGCACCCAGCAT
CCCAGGACGGACTTCAGGGGACACGTGTAGTATGTTAAGACATGCTGAGGAAACTATCTTCAAA
AAATCAGCAGCAGTTGAAACGCTACAAAAGACATTGTTCAAAGATTTTATTTAAACTATGAAGA
ATCGACATGCAACCCACCTGCTCCTTCATGAACAGTTCCATCTGGCTGACTGAACTCTCTCATG
TTTCCACACTTCTCAGTCCTGAAGAAGGAGGAAAGCAAAGCAGCGCCTATTTTGTATAAAGTTT
CTGACTCCGTCTTGGCTGTGTAGTGCTATCTGTGTGGAGAAACTTCATGAATGCACCATTTTGA
TGACCATGACACACAGGAAAAATGCCTCTGGACATTTTTCTGTACTCATACTTAGATTCACAAT
GGTTGTGTATCTCTATAATGTGAAATATTTTTTTGTGGTGAAAAAAGGGGGCCAAGGAGGTATG
AGCCATCAAACTGGAACAGAGGATGACTACATGGTTAGGAGAATCTGGGGTGGCCGGGAGGGAG
GGAGGGTTGATCATTGCTTACCTTCATCTTAATGAAACGAAACTTTGTAACTTATTGTAGTTAG
AAATTGTAACTTTGATATTGAATTCTCTTGCCTTCAACAAGCACACTGACAGAGAAAAGATGCT
ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCGAGTGCGGTCTGCA
ACATTTTTTCAACTTTTGCTAGCACTGTATACTATTGCATTCTTAGGCTACTGTGAGGTCTATG
TTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTGTGTTTTGTATGTGGT
TATAAAATTGTAGACTTTTGTGATTTTGCCAAAGTTGTAGCTAAATATTTATACACTTGTCTTG
AATTTTTTTCAGATCCACTTAAATATTTAGAAAAATGAGTTTTTATTCCTTATGTGTCTTATAA
GGGATAAAACGGTCTCCATCCAACACGTACTTTACCACGAACACTTGCAGTTGCTAAGGGACTT
TATTTTGTAACATATCAATTATAAATATTGTATTTATCTTTGA

hide sequence

RefSeq Acc Id:

XM_021723388 ⟹ XP_021579063

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,097 - 8,584,807 (+)	NCBI
SpeTri2.0	NW_004936486	16,978,048 - 17,092,209 (-)	NCBI

Sequence:

show sequence

CTCCCGCAGCGGCGTGGGGCTGGCGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGG
AAATCCAATTTCTTCCACTTCGTGCTGGCGCTCTACGACAGGCAGGGGCAGCCGGTGGAGATTG
AAAGAACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAGAGCCAAACAACGAGAAAACCAACAA
CGGTATCCACTATAAGCTCCAGCTACTATACAGTAACGGAGTCAGAACAGAGCAGGATCTGTAT
GTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTATGAGGGCCAGGACAAGAACCCGG
AGATGTGTCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAAAGTTG
TGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTCCTAAAGTTTTTC
CTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCTCGGGATATGCGGAGATTCCAGG
TTGTTGTATCGACAACAGTCAACGTGGACGGCCATGTGTTGGCCGTGTCCGACAACATGTTTGT
GCACAACAACTCCAAACACGGGCGGCGGGCCCGCCGCCTGGACCCGTCAGAAGGTACGGCCCCT
TCTTATCTGGAAAATGCAACTCCGTGCATTAAGGCCATCAGTCCGAGTGAAGGCTGGACCACGG
GGGGCGCCACCGTGATCATAATCGGAGACAACTTCTTTGACGGTCTACAAGTTGTGTTCGGAAC
TATGCTGGTGTGGAGTGAGCTGATAACGCCCCATGCCATCCGGGTGCAGACCCCGCCGCGGCAC
ATCCCTGGAGTTGTCGAAGTCACCCTCTCCTACAAGTCCAAGCAGTTCTGCAAAGGCGCTCCTG
GGCGCTTCGTCTACACCGCCCTTAATGAACCAACCATAGATTACGGCTTCCAGAGGTTGCAGAA
AGTGATCCCCAGACATCCGGGTGATCCCGAAAGGTTACCCAAGGAAGTGCTGCTTAAGAGGGCA
GCGGACCTCGTGGAAGCCTTGTATGGGATGCCTCACAACAACCAGGAGATCATCCTGAAGCGAG
CCGCCGACATTGCTGAGGCACTGTATAGCGTGCCCCGCAATCACAACCAGATACCCACCCTGGG
CAACACTCCGGCCCACACCGGCATGATGGGCGTGAATTCCTTCAGCAGCCAGCTAGCCGTCAAC
GTGTCAGAGACATCGCAAGCCAACGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCC
CGCGAGGATACGTCCCCAGCAGTACTCCCCAGCAGTCCAATTACAACACAGTCAGCACTAGCAT
GAATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAAT
GGCTCCTCCGCTAACTCTCCCTACGGCATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTTCGG
TCACCCTCCCTTCAAACTGTAGCAGCACACACGGCATTTTCTCATTCTCACCTGCCAATGTCAT
CTCCGCAGTGAAACAGAAGAGCGCCTTCGCGCCTGTGGTCCGGCCCCAAGCCTCGCCGCCTCCC
TCCTGCACCAGCGCCAACGGGAACGGACTGCAAGGCTCTCTGCTGGGTGCTGAGGACGTAGCCG
TGGAGAAGACAAACTGGCCCTTTTGTGAAGTCGGTGGCATATTTCACTTTGATGAACTAATGCT
CAAAAAAGGAACTGGAAAGCTATGTCTGGGCTGGTAGTCCCGCCCATGTGAGGGACTCTAGTTT
ACCTTGCGCAGCACCCAGCATCCCAGGACGGACTTCAGGGGACACGTGTAGTATGTTAAGACAT
GCTGAGGAAACTATCTTCAAAAAATCAGCAGCAGTTGAAACGCTACAAAAGACATTGTTCAAAG
ATTTTATTTAAACTATGAAGAATCGACATGCAACCCACCTGCTCCTTCATGAACAGTTCCATCT
GGCTGACTGAACTCTCTCATGTTTCCACACTTCTCAGTCCTGAAGAAGGAGGAAAGCAAAGCAG
CGCCTATTTTGTATAAAGTTTCTGACTCCGTCTTGGCTGTGTAGTGCTATCTGTGTGGAGAAAC
TTCATGAATGCACCATTTTGATGACCATGACACACAGGAAAAATGCCTCTGGACATTTTTCTGT
ACTCATACTTAGATTCACAATGGTTGTGTATCTCTATAATGTGAAATATTTTTTTGTGGTGAAA
AAAGGGGGCCAAGGAGGTATGAGCCATCAAACTGGAACAGAGGATGACTACATGGTTAGGAGAA
TCTGGGGTGGCCGGGAGGGAGGGAGGGTTGATCATTGCTTACCTTCATCTTAATGAAACGAAAC
TTTGTAACTTATTGTAGTTAGAAATTGTAACTTTGATATTGAATTCTCTTGCCTTCAACAAGCA
CACTGACAGAGAAAAGATGCTACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCT
GTTAAGCGAGTGCGGTCTGCAACATTTTTTCAACTTTTGCTAGCACTGTATACTATTGCATTCT
TAGGCTACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCT
TCCCTGTGTTTTGTATGTGGTTATAAAATTGTAGACTTTTGTGATTTTGCCAAAGTTGTAGCTA
AATATTTATACACTTGTCTTGAATTTTTTTCAGATCCACTTAAATATTTAGAAAAATGAGTTTT
TATTCCTTATGTGTCTTATAAGGGATAAAACGGTCTCCATCCAACACGTACTTTACCACGAACA
CTTGCAGTTGCTAAGGGACTTTATTTTGTAACATATCAATTATAAATATTGTATTTATCTTTGA

hide sequence

RefSeq Acc Id:

XM_021723389 ⟹ XP_021579064

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,097 - 8,584,807 (+)	NCBI
SpeTri2.0	NW_004936486	16,979,015 - 17,092,209 (-)	NCBI

Sequence:

show sequence

CTCCCGCAGCGGCGTGGGGCTGGCGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGG
AAATCCAATTTCTTCCACTTCGTGCTGGCGCTCTACGACAGGCAGGGGCAGCCGGTGGAGATTG
AAAGAACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAGAGCCAAACAACGAGAAAACCAACAA
CGGTATCCACTATAAGCTCCAGCTACTATACAGTAACGGAGTCAGAACAGAGCAGGATCTGTAT
GTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTATGAGGGCCAGGACAAGAACCCGG
AGATGTGTCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAAAGTTG
TGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTCCTAAAGTTTTTC
CTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCTCGGGATATGCGGAGATTCCAGG
TTGTTGTATCGACAACAGTCAACGTGGACGGCCATGTGTTGGCCGTGTCCGACAACATGTTTGT
GCACAACAACTCCAAACACGGGCGGCGGGCCCGCCGCCTGGACCCGTCAGAAGGTACGGCCCCT
TCTTATCTGGAAAATGCAACTCCGTGCATTAAGGCCATCAGTCCGAGTGAAGGCTGGACCACGG
GGGGCGCCACCGTGATCATAATCGGAGACAACTTCTTTGACGGTCTACAAGTTGTGTTCGGAAC
TATGCTGGTGTGGAGTGAGCTGATAACGCCCCATGCCATCCGGGTGCAGACCCCGCCGCGGCAC
ATCCCTGGAGTTGTCGAAGTCACCCTCTCCTACAAGTCCAAGCAGTTCTGCAAAGGCGCTCCTG
GGCGCTTCGTCTACACCGCCCTTAATGAACCAACCATAGATTACGGCTTCCAGAGGTTGCAGAA
AGTGATCCCCAGACATCCGGGTGATCCCGAAAGGTTACCCAAGGAAGTGCTGCTTAAGAGGGCA
GCGGACCTCGTGGAAGCCTTGTATGGGATGCCTCACAACAACCAGGAGATCATCCTGAAGCGAG
CCGCCGACATTGCTGAGGCACTGTATAGCGTGCCCCGCAATCACAACCAGATACCCACCCTGGG
CAACACTCCGGCCCACACCGGCATGATGGGCGTGAATTCCTTCAGCAGCCAGCTAGCCGTCAAC
GTGTCAGAGACATCGCAAGCCAACGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCC
CGCGAGGATACGTCCCCAGCAGTACTCCCCAGCAGTCCAATTACAACACAGTCAGCACTAGCAT
GAATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAAT
GGCTCCTCCGCTAACTCTCCCTACGGCATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTTCGG
TCACCCTCCCTTCAAACTGTAGCAGCACACACGGCATTTTCTCATTCTCACCTGCCAATGTCAT
CTCCGCAGTGAAACAGAAGAGCGCCTTCGCGCCTGTGGTCCGGCCCCAAGCCTCGCCGCCTCCC
TCCTGCACCAGCGCCAACGGGAACGGACTGCAAGCTATGTCTGGGCTGGTAGTCCCGCCCATGT
GAGGGACTCTAGTTTACCTTGCGCAGCACCCAGCATCCCAGGACGGACTTCAGGGGACACGTGT
AGTATGTTAAGACATGCTGAGGAAACTATCTTCAAAAAATCAGCAGCAGTTGAAACGCTACAAA
AGACATTG

hide sequence

RefSeq Acc Id:

XM_040272135 ⟹ XP_040128069

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,183 - 8,580,961 (+)	NCBI

RefSeq Acc Id:

XM_040272136 ⟹ XP_040128070

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,183 - 8,580,961 (+)	NCBI

RefSeq Acc Id:

XM_040272137 ⟹ XP_040128071

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,183 - 8,584,807 (+)	NCBI

RefSeq Acc Id:

XM_040272138 ⟹ XP_040128072

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	8,469,097 - 8,584,807 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005320832	(Get FASTA)	NCBI Sequence Viewer
	XP_013212053	(Get FASTA)	NCBI Sequence Viewer
	XP_013212054	(Get FASTA)	NCBI Sequence Viewer
	XP_021579059	(Get FASTA)	NCBI Sequence Viewer
	XP_021579060	(Get FASTA)	NCBI Sequence Viewer
	XP_021579061	(Get FASTA)	NCBI Sequence Viewer
	XP_021579062	(Get FASTA)	NCBI Sequence Viewer
	XP_021579063	(Get FASTA)	NCBI Sequence Viewer
	XP_021579064	(Get FASTA)	NCBI Sequence Viewer
	XP_040128069	(Get FASTA)	NCBI Sequence Viewer
	XP_040128070	(Get FASTA)	NCBI Sequence Viewer
	XP_040128071	(Get FASTA)	NCBI Sequence Viewer
	XP_040128072	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000005478.3
GenBank Protein	KAG3263848	(Get FASTA)	NCBI Sequence Viewer
	KAG3263849	(Get FASTA)	NCBI Sequence Viewer
	KAG3263850	(Get FASTA)	NCBI Sequence Viewer
	KAG3263851	(Get FASTA)	NCBI Sequence Viewer
	KAG3263852	(Get FASTA)	NCBI Sequence Viewer
	KAG3263853	(Get FASTA)	NCBI Sequence Viewer
	KAG3263854	(Get FASTA)	NCBI Sequence Viewer
	KAG3263855	(Get FASTA)	NCBI Sequence Viewer
	KAG3263856	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005320832 ⟸ XM_005320775
- Peptide Label:	isoform X4
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQN CLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISP SEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ FCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQ EIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSR NTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGMKQKSA FAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM hide sequence

RefSeq Acc Id:	XP_013212053 ⟸ XM_013356599
- Peptide Label:	isoform X7
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQN CLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISP SEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ FCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQ EIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSR NTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGIVPSSP TMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQGSLL GAEDVAVEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW hide sequence

RefSeq Acc Id:	XP_013212054 ⟸ XM_013356600
- Peptide Label:	isoform X11
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQN CLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISP SEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ FCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQ EIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSR NTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGIVPSSP TMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSG LVVPPM hide sequence

RefSeq Acc Id:	XP_021579063 ⟸ XM_021723388
- Peptide Label:	isoform X6
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQN CLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENA TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVE VTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEA LYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQ ANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANS PYGIVPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSAN GNGLQGSLLGAEDVAVEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW hide sequence

RefSeq Acc Id:

XP_021579062 ⟸ XM_021723387

- Peptide Label:

isoform X5

- Sequence:

show sequence

MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQN
CLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENA
TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVE
VTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEA
LYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQ
ANDQVKQKSAFAPVVRPQASPPPSCTSANGNGLQGSLLGAEDVAVEKTNWPFCEVGGIFHFDEL
MLKKGTGKLCLGW

hide sequence

RefSeq Acc Id:	XP_021579061 ⟸ XM_021723386
- Peptide Label:	isoform X13
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQN CLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENA TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVE VTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEA LYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQ ANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANS PYGMKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM hide sequence

RefSeq Acc Id:	XP_021579060 ⟸ XM_021723385
- Peptide Label:	isoform X10
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQN CLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENA TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVE VTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEA LYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQ ANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANS PYGMKQKSAFAPVVRPQASPPPSCTSANGNGLQGSLLGAEDVAVEKTNWPFCEVGGIFHFDELM LKKGTGKLCLGW hide sequence

RefSeq Acc Id:	XP_021579059 ⟸ XM_021723384
- Peptide Label:	isoform X1
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQN CLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENA TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVE VTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEA LYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQ ANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANS PYGMPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANG NGLQGSLLGAEDVAVEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW hide sequence

RefSeq Acc Id:	XP_021579064 ⟸ XM_021723389
- Peptide Label:	isoform X9
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQN CLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENA TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVE VTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEA LYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQ ANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANS PYGIVPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSAN GNGLQAMSGLVVPPM hide sequence

RefSeq Acc Id:	XP_040128072 ⟸ XM_040272138
- Peptide Label:	isoform X12
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040128071 ⟸ XM_040272137
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_040128069 ⟸ XM_040272135
- Peptide Label:	isoform X2
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040128070 ⟸ XM_040272136
- Peptide Label:	isoform X3
- UniProtKB:	I3M7A8 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSSTOP00000005478 ⟸ ENSSTOT00000006123

Protein Domains

IPT/TIG

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000006113	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000006123.3	UniProtKB/TrEMBL
Gene3D-CATH	1.10.287.4280	UniProtKB/TrEMBL
	2.60.40.10	UniProtKB/TrEMBL
	2.60.40.3180	UniProtKB/TrEMBL
InterPro	COE_DBD	UniProtKB/TrEMBL
	COE_DBD_sf	UniProtKB/TrEMBL
	COE_HLH	UniProtKB/TrEMBL
	COE_IPT	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_E-set	UniProtKB/TrEMBL
	IPT_dom	UniProtKB/TrEMBL
	Transcription_factor_COE	UniProtKB/TrEMBL
	Transcription_factor_COE_CS	UniProtKB/TrEMBL
NCBI Gene	Ebf3	ENTREZGENE
PANTHER	PTHR10747	UniProtKB/TrEMBL
	TRANSCRIPTION FACTOR COE3	UniProtKB/TrEMBL
Pfam	COE1_DBD	UniProtKB/TrEMBL
	COE1_HLH	UniProtKB/TrEMBL
	TIG	UniProtKB/TrEMBL
PROSITE	COE	UniProtKB/TrEMBL
SMART	IPT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF81296	UniProtKB/TrEMBL
UniProt	I3M7A8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-09-25	Ebf3	EBF transcription factor 3		early B cell factor 3	Symbol and/or name change	5135510	APPROVED
2017-12-19	Ebf3	early B cell factor 3		early B-cell factor 3	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM