Tubg2 (tubulin gamma 2) - Rat Genome Database

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Gene: Tubg2 (tubulin gamma 2) Ictidomys tridecemlineatus
Analyze
Symbol: Tubg2
Name: tubulin gamma 2 (Ensembl:tubulin gamma 1)
RGD ID: 12685000
Description: ENCODES a protein that exhibits GTP binding (inferred); nucleotide binding (inferred); structural constituent of cytoskeleton (inferred); INVOLVED IN cytoplasmic microtubule organization (inferred); meiotic spindle organization (inferred); microtubule nucleation (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN centrosome (inferred); cytoplasm (inferred); cytoplasmic microtubule (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC101969562; tubulin gamma-2 chain; tubulin, gamma 2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560219,677,132 - 19,682,531 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649017,357,608 - 17,398,008 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649017,392,613 - 17,398,000 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Tubg2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560219,677,132 - 19,682,531 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649017,357,608 - 17,398,008 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649017,392,613 - 17,398,000 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TUBG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381742,659,284 - 42,667,006 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1742,659,284 - 42,667,006 (+)EnsemblGRCh38hg38GRCh38
GRCh371740,811,302 - 40,819,024 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361738,064,837 - 38,072,550 (+)NCBINCBI36Build 36hg18NCBI36
Build 341738,064,836 - 38,072,549NCBI
Celera1737,466,727 - 37,474,489 (+)NCBICelera
Cytogenetic Map17q21.2NCBI
HuRef1736,576,288 - 36,584,051 (+)NCBIHuRef
CHM1_11741,047,015 - 41,054,778 (+)NCBICHM1_1
T2T-CHM13v2.01743,516,421 - 43,524,145 (+)NCBIT2T-CHM13v2.0
Tubg2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911101,045,945 - 101,052,613 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11101,046,733 - 101,052,613 (+)EnsemblGRCm39 Ensembl
GRCm3811101,155,874 - 101,161,787 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11101,155,907 - 101,161,787 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711101,017,198 - 101,023,101 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611100,972,011 - 100,977,877 (+)NCBIMGSCv36mm8
Celera11112,452,235 - 112,457,888 (+)NCBICelera
Cytogenetic Map11DNCBI
cM Map1164.3NCBI
Tubg2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81086,591,610 - 86,597,865 (+)NCBIGRCr8
mRatBN7.21086,091,205 - 86,108,053 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1086,091,188 - 86,097,580 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1091,127,728 - 91,133,981 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01090,606,565 - 90,612,821 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01085,999,724 - 86,005,978 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01089,069,223 - 89,075,589 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1089,069,256 - 89,075,585 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01088,867,752 - 88,874,096 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41090,176,513 - 90,182,805 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1084,808,843 - 84,815,151 (+)NCBICelera
Cytogenetic Map10q31NCBI
TUBG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21922,318,003 - 22,327,016 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11724,208,026 - 24,217,039 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01714,650,131 - 14,657,883 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11714,874,192 - 14,881,937 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1714,874,192 - 14,881,937 (-)Ensemblpanpan1.1panPan2
LOC100856176
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1920,322,054 - 20,326,696 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl920,322,253 - 20,363,455 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha919,783,998 - 19,788,644 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0921,041,079 - 21,045,725 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl921,039,469 - 21,045,498 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1919,826,995 - 19,831,642 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0920,092,171 - 20,096,823 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0920,196,197 - 20,200,858 (-)NCBIUU_Cfam_GSD_1.0
TUBG2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11663,622,196 - 63,629,548 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1663,619,346 - 63,629,297 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607734,415,317 - 34,422,637 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005321887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSTOT00000003717   ⟹   ENSSTOP00000003329
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649017,392,570 - 17,398,008 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000020441   ⟹   ENSSTOP00000019951
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649017,357,608 - 17,363,020 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000031486   ⟹   ENSSTOP00000029403
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649017,357,608 - 17,397,823 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000033482   ⟹   ENSSTOP00000032403
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649017,357,608 - 17,397,823 (+)Ensembl
RefSeq Acc Id: XM_005321887   ⟹   XP_005321944
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560219,677,132 - 19,682,531 (-)NCBI
SpeTri2.0NW_00493649017,392,613 - 17,398,000 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005321944 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000003329.2
  ENSSTOP00000029403.1
  ENSSTOP00000032403.1
GenBank Protein KAG3268896 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005321944   ⟸   XM_005321887
- UniProtKB: I3M2U2 (UniProtKB/TrEMBL),   A0A287D791 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSTOP00000029403   ⟸   ENSSTOT00000031486
RefSeq Acc Id: ENSSTOP00000032403   ⟸   ENSSTOT00000033482
RefSeq Acc Id: ENSSTOP00000019951   ⟸   ENSSTOT00000020441
RefSeq Acc Id: ENSSTOP00000003329   ⟸   ENSSTOT00000003717

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000003716 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000003717.3 UniProtKB/TrEMBL
  ENSSTOT00000031486.1 UniProtKB/TrEMBL
  ENSSTOT00000033482.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.600 UniProtKB/TrEMBL
  3.30.1330.20 UniProtKB/TrEMBL
  3.40.50.1440 UniProtKB/TrEMBL
InterPro Gamma_tubulin UniProtKB/TrEMBL
  Tub_FtsZ_C UniProtKB/TrEMBL
  Tubulin UniProtKB/TrEMBL
  Tubulin/FtsZ-like_C UniProtKB/TrEMBL
  Tubulin/FtsZ_2-layer-sand-dom UniProtKB/TrEMBL
  Tubulin/FtsZ_GTPase_sf UniProtKB/TrEMBL
  Tubulin_C UniProtKB/TrEMBL
  Tubulin_CS UniProtKB/TrEMBL
  Tubulin_FtsZ_GTPase UniProtKB/TrEMBL
NCBI Gene LOC101969562 ENTREZGENE
PANTHER PTHR11588 UniProtKB/TrEMBL
  TUBULIN GAMMA-2 CHAIN UniProtKB/TrEMBL
Pfam Tubulin UniProtKB/TrEMBL
  Tubulin_C UniProtKB/TrEMBL
PRINTS GAMMATUBULIN UniProtKB/TrEMBL
  TUBULIN UniProtKB/TrEMBL
PROSITE TUBULIN UniProtKB/TrEMBL
SMART Tubulin UniProtKB/TrEMBL
  Tubulin_C UniProtKB/TrEMBL
Superfamily-SCOP SSF52490 UniProtKB/TrEMBL
  SSF55307 UniProtKB/TrEMBL
UniProt A0A287D791 ENTREZGENE, UniProtKB/TrEMBL
  I3M2U2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 Tubg2  tubulin gamma 2  LOC101969562  tubulin gamma-2 chain  Symbol and/or name change 5135510 APPROVED