Mcam (melanoma cell adhesion molecule)

Gene: Mcam (melanoma cell adhesion molecule) Ictidomys tridecemlineatus

Analyze

Symbol:

Mcam

Name:

melanoma cell adhesion molecule

RGD ID:

12684487

Description:

ENCODES a protein that exhibits laminin receptor activity (inferred); INVOLVED IN angiogenesis (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH autoimmune disease of the nervous system (ortholog); CD3epsilon deficiency (ortholog); Chromosome 11, Partial Trisomy 11q (ortholog); FOUND IN extracellular space (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cell surface glycoprotein MUC18; melanoma cell adhesion molecule, transcript variant X1; melanoma cell adhesion molecule, transcript variant X2; melanoma cell adhesion molecule, transcript variant X3; melanoma cell adhesion molecule, transcript variant X4; melanoma cell adhesion molecule, transcript variant X5

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	101,314,589 - 101,328,572 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936542	4,237,010 - 4,244,462 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936542	4,235,914 - 4,244,981 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autoimmune disease of the nervous system (ISO)

CD3epsilon deficiency (ISO)

Chromosome 11, Partial Trisomy 11q (ISO)

chronic obstructive pulmonary disease (ISO)

Dwarfism (ISO)

Emphysema (ISO)

genetic disease (ISO)

Hypoglossal Nerve Injuries (ISO)

immunodeficiency 17 (ISO)

immunodeficiency 18 (ISO)

immunodeficiency 19 (ISO)

impotence (ISO)

inflammatory bowel disease 28 (ISO)

isolated microphthalmia 5 (ISO)

malignant mesothelioma (ISO)

multiple sclerosis (ISO)

Neurogenic Inflammation (ISO)

Peritoneal Neoplasms (ISO)

RASopathy (ISO)

schizophrenia (ISO)

uveal melanoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

angiogenesis (IEA,ISO)

cell adhesion (IEA)

glomerular filtration (IEA)

positive regulation of cell migration (ISO)

vascular wound healing (IEA)

Cellular Component

external side of plasma membrane (IEA)

extracellular space (ISO)

membrane (IEA)

plasma membrane (IEA)

Molecular Function

laminin receptor activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Mcam
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	101,314,589 - 101,328,572 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936542	4,237,010 - 4,244,462 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936542	4,235,914 - 4,244,981 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MCAM
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	119,308,529 - 119,317,130 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	119,308,529 - 119,321,521 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	119,179,239 - 119,187,840 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	118,684,444 - 118,693,050 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	118,684,187 - 118,693,050	NCBI
Celera	11	116,339,434 - 116,348,037 (-)	NCBI		Celera
Cytogenetic Map	11	q23.3	NCBI
HuRef	11	115,119,937 - 115,128,540 (-)	NCBI		HuRef
CHM1_1	11	119,065,786 - 119,074,389 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	119,329,165 - 119,337,763 (-)	NCBI		T2T-CHM13v2.0

Mcam
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	44,045,958 - 44,054,024 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	44,045,766 - 44,054,024 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	44,134,658 - 44,142,727 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	44,134,469 - 44,142,727 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	43,942,741 - 43,950,809 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	43,885,666 - 43,893,719 (+)	NCBI		MGSCv36	mm8
Celera	9	41,392,205 - 41,400,272 (+)	NCBI		Celera
Cytogenetic Map	9	A5.1	NCBI
cM Map	9	24.68	NCBI

Mcam
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	53,376,225 - 53,384,407 (+)	NCBI		GRCr8
mRatBN7.2	8	44,479,391 - 44,487,575 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	44,479,376 - 44,487,571 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	49,974,482 - 49,982,684 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	48,253,193 - 48,261,397 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	46,124,029 - 46,132,210 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	48,472,824 - 48,481,005 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	48,472,824 - 48,481,001 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	47,091,191 - 47,099,630 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	47,105,632 - 47,127,936 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	47,130,370 - 47,135,903 (+)	NCBI
Celera	8	44,066,232 - 44,074,417 (+)	NCBI		Celera
Cytogenetic Map	8	q22	NCBI

Mcam
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	20,397,051 - 20,404,780 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955412	20,396,056 - 20,404,777 (-)	NCBI	ChiLan1.0	ChiLan1.0

MCAM
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	120,016,269 - 120,024,928 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	121,119,769 - 121,128,446 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	114,149,583 - 114,158,234 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	118,076,841 - 118,084,748 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	118,078,179 - 118,083,893 (-)	Ensembl	panpan1.1		panPan2

MCAM
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	14,590,252 - 14,598,901 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	14,567,238 - 14,598,149 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	14,643,495 - 14,652,026 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	14,533,623 - 14,542,154 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	14,510,591 - 14,542,153 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	14,672,708 - 14,680,319 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	14,575,921 - 14,584,454 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	14,616,078 - 14,624,610 (+)	NCBI		UU_Cfam_GSD_1.0

MCAM
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	46,512,784 - 46,522,083 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	46,506,375 - 46,522,091 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	51,546,351 - 51,557,212 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MCAM
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	110,682,631 - 110,691,717 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	110,684,458 - 110,691,707 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	15,343,344 - 15,351,927 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mcam
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	14,673,060 - 14,681,423 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624784	14,671,524 - 14,681,151 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005328367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005328368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013359973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013359974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013359975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000020033 ⟹ ENSSTOP00000018142

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936542	4,237,010 - 4,244,462 (-)	Ensembl

RefSeq Acc Id:

XM_005328367 ⟹ XP_005328424

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	101,314,589 - 101,323,125 (-)	NCBI
SpeTri2.0	NW_004936542	4,235,924 - 4,244,975 (-)	NCBI

Sequence:

show sequence

CAGTGGAGCAATCATTCTGGGAGGTGTCCAAAGCTGGCCCAATTTCTCTGAGGCGGAGCAGAGG
AGCCTGAATGGGAGGCTCCCATTAGGGACACAGAGGACCTGATCTGCTATTCCTCCGCCAGGAG
GTCCCCCAGTGCTACACTGGTAAGGTCTGGGCTGGGGTGAACACCGCTGTGGCGATCTGGGCCT
TTCTGGGCATCCGGACCAGCTTCTCCTCGCTGCTTCCTCGGTCAGTCTGTCCGGCCCCAAGACA
CCTGTCACTGCTCCCGTGGTGTGCTCAAACTGGGGGCTGGAAGGCGGGCTACGGCCTACCTCCG
GCCGCGCTCTGGAGTGCGGCTTAGGGGCCGGCGCATCGGGGACCGCCCCCTAGGGCTGCTGCGT
GCGGGGGCGGGGGCGGGGGGCTGCGCGGGGCGGGGCAGGCCAGCGCTTGGGCCCCCTCCCCCGC
CCCCCTGACGTCAGCCCCCGGCAGTCGCAAGCTCCTCACTTGGCTCTCGTCCTCCGGCCGGGAA
GCATGGATCTACCCGGACTCCTCTGCGCCTTCTTGCTGGTCGTCTGCTGCTGCTGTCGCCGCGC
CACTGGTGTGCCTGGAGAGGCGGAGCAGCCCACACCAGAGCTGGTGGAAGTGGAAGTGGGCAAC
ACGGCCCTTCTGAGGTGTGGCCCTTCACACTCCCTGGGCAACCTCAGCCATGTGGACTGGTTTT
CTGTCTACAAGGAGAAGCCCACACTCATCTTCCGTGTGCGCCAGGGCCAGGGTCAGAGTGAGCC
TGGGGAGTACCAGCACCGTCTCAGCCTCCAGGGCCCAGGGGCTCTGGCTCTGACTCAGGTCATG
CCCCATGATGAGCGCATCTTCCTGTGCCAGAGTAAGCGTCCTCTGTCCCAGGAGCACCGCATTC
AGCTCCATGTCTTCAAAGCTCCAGAGGAGCCAACCATCCAGGCCAGTGCCCTGGGCATCTCTGT
AAACAGCAGGGAGCCTGAGGAGGTCGCCACCTGTATAGGGAGGAATGGGTACCCCGTTCCTCAA
GTCATTTGGTACAAGAATCGTCTGCCCCTGATGGAGGAGAAAAATCGCGTCCACATTCAGTCCT
CGCAGATCGTGGAGTCAAGTGGCTTATACACCTTGAAGAGTGTTCTGAAGGTACAGCTGGTTAA
GGAAGACAAAGATGCCCGATTTTATTGTGAGCTCAGTTACCGACTGCCCAGTGGGAACCACATG
AAGGAATCTAGGGAAGTCACTGTCCCCGTTTTCTACCCAGCGGAAAAAGTGTGGTTGGAAGTGG
AGCCTGCAGGAATGCTGAAGGAAGGGGATCGTGTGGAAATCAGATGTTTGGCGGATGGCAACCC
CACACCTCCCTTCAGCATCTACAAGCAGAATCCCAGCACTAGGGAGATGGAGGAAGAGAGATCC
ACTGATAATGGCCTCCTGGTGCTGGAGCCTGCCCAGAAGCAGCACAGCGGGCTCTATGAATGCC
AGGGTCTGGACCTAGAAACCATGATACCACTGTTGAGTGAACCCCAGGAGCTGCTGGTGAACTA
TGTGTCTGATGTTGACGTGAGTCCCGCAGCCCCTGCAGGCCAAGAAGGCAGTAGCCTTACACTG
ACCTGCAAGGCAGAGAGTAACCAGGCCCTCGAGTTCCAGTGGCTGAGAGAAAAGACAGGCCAAG
TGCTGGAAAAGGGGTCTGTGCTTCACTTTGACCATCTGAAACGGGAGATAGGAGGAGGCTACCG
CTGCGTGGCATCTGTGCCCAGCGTACCTGGCCTGAACCGCACACAGCTAGTCAATGTGGCCATT
TTTGGTCCCCCATGGATGGCATCAAAGAAGAGGAAGGTGTGGGTGAAAGAGAATACAATGCTTA
ATCTGTCTTGTGAAGCATCAGGACATCCTCGGCCCACCATCTCCTGGGACATCAACGGGACTGC
AAGTGAAGAATACCAAGATTCACAGAGGGTGCTGAGCACTCTGAATGTCCTTGTGACCCCAGAG
CTGTTGGAGAGGGGCGCGGAATGCACAGCTTCCAATTCCCTGGGCAGAAACAGCACCATCATCA
TCCTGGAGCTGGTCAGTTTAACCACCCTCGCACCAGACTCTAGCAAAACAGCTGGCCTCAGCAC
CTCCACTGCCAGTCCTCATGCCAGAGCCAACAGCACCTCCACAGAGAAAAAGCTGCGGGAGCAG
GAGAGCAAGGGCGTGGTCATTGTGGCTGTGATCGTGTGCATCCTGGTCCTGGCTGTGCTGGGCG
CTGTCCTCTATTTCCTCTACAAGAAGGGCAAGCTGCTGTGTGGGCGGTCAGGCAAACAAGAGAT
CACGCTGCCCCCGTCTCATAAGAGCGAATTTGTAGTTGAAGTTAAGTCAGATAAGCTCCCAGAA
GAGATGGGCCTCCTACAGGGCAGCAGCGGTGACAAGAGGGCTCCAGGAGACCAGGGAGAGAAAT
ACATCGATCTGAGGCATTAGCCATGGAATCACATTGGTTCTCTCCTCACCTGGACAGTTTCTGG
CTCCCTGCTCACTCTTTTCCCCAGCCAAAGCCCCCAAAGGGACTACAGAGAAGACCCTGCTCCA
GCACACCTACAGATCAATTCTAGAGGGCTGTGGGCTAGGGCCAGAGCCATCCCAAGAAGGACCT
CACTTGGCCCTGGAGGCCCCCTTTTAGGGCCCAGTCCACCTCTATCTCCACTTATGTGATGTTC
AGAAGAGGCCTCAGTTCCCCACAAGTGACTGAAGTTTCTTGTAGAACATGTTTTCTCCTTAAAT
ATGCTATAGCTATAAATACCTGTCTTCTACCAGCCCCTATCCTAGCTGGTTTTCTGCCTACCCC
TGCCAGGCTGGCTTTGGTAATCCATTTGTACCCCTGACATGAGAAGGCACCAGGGCCCAGGTTC
ACTGTCACAGAATGCAGTTTTGCTGGCTCTGGAGAGTACGCTGTAGTATCCGGAAGCAGTGGCA
GAGTCGCTGCTATAACTTCCTGCCTGCCTCTTTTGTGACATTTTCTCTTTGGGCTCAAATCAGG
AACTGGTGTTATTTCCTCAAGAATATGTCCTGCAGGGAGGAAGCCAGGTGACATTCCTGTGAAG
ACCTCTGAGCCTGAGCCTCTACATTTACATGGCTCCCAGTGCCCTCAAAGGATCATGTGAGACT
GAAAGATGAGAGATGGAGGGAGAGAGATGAGGTGACCTGTCCTTTATGGGGATTAAGGCTATAG
TTATATTATCACCAAATTTCTATAAACTGAGCTAATGGGCCTAGACTCTACAAGGGCCCAAATA
GGAGAATGGTACTTAGGGATGAAAAACCAGGGGCCTGGCTAGAGCTTTGGGGTGTGTGTGAGTG
TGTATGTGTAGTGACATGCATGCTTGCTCATGTGGTTTTGTTGTATGTAAATCTGCAAATTATG
TGTGTCTATGTGTGTGTGCACGTGTGTGTACGTGTGTGTGTGTGAGAAAAATAAAGCTTAATTG
TCCTGGAAGTTGTGCAGTGCTTTCCATTCATCATGGGTATCACGGGTACCTGGGGTTTCTCACC
TGCCCCCAAAAGAACACA

hide sequence

RefSeq Acc Id:

XM_005328368 ⟹ XP_005328425

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	101,314,589 - 101,323,125 (-)	NCBI
SpeTri2.0	NW_004936542	4,235,914 - 4,244,978 (-)	NCBI

Sequence:

show sequence

GCGCAGTGGAGCAATCATTCTGGGAGGTGTCCAAAGCTGGCCCAATTTCTCTGAGGCGGAGCAG
AGGAGCCTGAATGGGAGGCTCCCATTAGGGACACAGAGGACCTGATCTGCTATTCCTCCGCCAG
GAGGTCCCCCAGTGCTACACTGGTAAGGTCTGGGCTGGGGTGAACACCGCTGTGGCGATCTGGG
CCTTTCTGGGCATCCGGACCAGCTTCTCCTCGCTGCTTCCTCGGTCAGTCTGTCCGGCCCCAAG
ACACCTGTCACTGCTCCCGTGGTGTGCTCAAACTGGGGGCTGGAAGGCGGGCTACGGCCTACCT
CCGGCCGCGCTCTGGAGTGCGGCTTAGGGGCCGGCGCATCGGGGACCGCCCCCTAGGGCTGCTG
CGTGCGGGGGCGGGGGCGGGGGGCTGCGCGGGGCGGGGCAGGCCAGCGCTTGGGCCCCCTCCCC
CGCCCCCCTGACGTCAGCCCCCGGCAGTCGCAAGCTCCTCACTTGGCTCTCGTCCTCCGGCCGG
GAAGCATGGATCTACCCGGACTCCTCTGCGCCTTCTTGCTGGTCGTCTGCTGCTGCTGTCGCCG
CGCCACTGGTGTGCCTGGAGAGGCGGAGCAGCCCACACCAGAGCTGGTGGAAGTGGAAGTGGGC
AACACGGCCCTTCTGAGGTGTGGCCCTTCACACTCCCTGGGCAACCTCAGCCATGTGGACTGGT
TTTCTGTCTACAAGGAGAAGCCCACACTCATCTTCCGTGTGCGCCAGGGCCAGGGTCAGAGTGA
GCCTGGGGAGTACCAGCACCGTCTCAGCCTCCAGGGCCCAGGGGCTCTGGCTCTGACTCAGGTC
ATGCCCCATGATGAGCGCATCTTCCTGTGCCAGAGTAAGCGTCCTCTGTCCCAGGAGCACCGCA
TTCAGCTCCATGTCTTCAAAGCTCCAGAGGAGCCAACCATCCAGGCCAGTGCCCTGGGCATCTC
TGTAAACAGCAGGGAGCCTGAGGAGGTCGCCACCTGTATAGGGAGGAATGGGTACCCCGTTCCT
CAAGTCATTTGGTACAAGAATCGTCTGCCCCTGATGGAGGAGAAAAATCGCGTCCACATTCAGT
CCTCGCAGATCGTGGAGTCAAGTGGCTTATACACCTTGAAGAGTGTTCTGAAGGTACAGCTGGT
TAAGGAAGACAAAGATGCCCGATTTTATTGTGAGCTCAGTTACCGACTGCCCAGTGGGAACCAC
ATGAAGGAATCTAGGGAAGTCACTGTCCCCGTTTTCTACCCAGCGGAAAAAGTGTGGTTGGAAG
TGGAGCCTGCAGGAATGCTGAAGGAAGGGGATCGTGTGGAAATCAGATGTTTGGCGGATGGCAA
CCCCACACCTCCCTTCAGCATCTACAAGCAGAATCCCAGCACTAGGGAGATGGAGGAAGAGAGA
TCCACTGATAATGGCCTCCTGGTGCTGGAGCCTGCCCAGAAGCAGCACAGCGGGCTCTATGAAT
GCCAGGGTCTGGACCTAGAAACCATGATACCACTGTTGAGTGAACCCCAGGAGCTGCTGGTGAA
CTATGTGTCTGATGTTGACGTGAGTCCCGCAGCCCCTGCAGGCCAAGAAGGCAGTAGCCTTACA
CTGACCTGCAAGGCAGAGAGTAACCAGGCCCTCGAGTTCCAGTGGCTGAGAGAAAAGACAGGCC
AAGTGCTGGAAAAGGGGTCTGTGCTTCACTTTGACCATCTGAAACGGGAGATAGGAGGAGGCTA
CCGCTGCGTGGCATCTGTGCCCAGCGTACCTGGCCTGAACCGCACACAGCTAGTCAATGTGGCC
ATTTTTGGTCCCCCATGGATGGCATCAAAGAAGAGGAAGGTGTGGGTGAAAGAGAATACAATGC
TTAATCTGTCTTGTGAAGCATCAGGACATCCTCGGCCCACCATCTCCTGGGACATCAACGGGAC
TGCAAGTGAAGAATACCAAGATTCACAGAGGGTGCTGAGCACTCTGAATGTCCTTGTGACCCCA
GAGCTGTTGGAGAGGGGCGCGGAATGCACAGCTTCCAATTCCCTGGGCAGAAACAGCACCATCA
TCATCCTGGAGCTGGTCAGTTTAACCACCCTCGCACCAGACTCTAGCAAAACAGCTGGCCTCAG
CACCTCCACTGCCAGTCCTCATGCCAGAGCCAACAGCACCTCCACAGAGAAAAAGCTGCGGGAG
CAGGAGAGCAAGGGCGTGGTCATTGTGGCTGTGATCGTGTGCATCCTGGTCCTGGCTGTGCTGG
GCGCTGTCCTCTATTTCCTCTACAAGAAGGGCAAGCTGCTGTGTGGGCGGTCAGGCAAACAAGA
GATGGAGAGAAATACATCGATCTGAGGCATTAGCCATGGAATCACATTGGTTCTCTCCTCACCT
GGACAGTTTCTGGCTCCCTGCTCACTCTTTTCCCCAGCCAAAGCCCCCAAAGGGACTACAGAGA
AGACCCTGCTCCAGCACACCTACAGATCAATTCTAGAGGGCTGTGGGCTAGGGCCAGAGCCATC
CCAAGAAGGACCTCACTTGGCCCTGGAGGCCCCCTTTTAGGGCCCAGTCCACCTCTATCTCCAC
TTATGTGATGTTCAGAAGAGGCCTCAGTTCCCCACAAGTGACTGAAGTTTCTTGTAGAACATGT
TTTCTCCTTAAATATGCTATAGCTATAAATACCTGTCTTCTACCAGCCCCTATCCTAGCTGGTT
TTCTGCCTACCCCTGCCAGGCTGGCTTTGGTAATCCATTTGTACCCCTGACATGAGAAGGCACC
AGGGCCCAGGTTCACTGTCACAGAATGCAGTTTTGCTGGCTCTGGAGAGTACGCTGTAGTATCC
GGAAGCAGTGGCAGAGTCGCTGCTATAACTTCCTGCCTGCCTCTTTTGTGACATTTTCTCTTTG
GGCTCAAATCAGGAACTGGTGTTATTTCCTCAAGAATATGTCCTGCAGGGAGGAAGCCAGGTGA
CATTCCTGTGAAGACCTCTGAGCCTGAGCCTCTACATTTACATGGCTCCCAGTGCCCTCAAAGG
ATCATGTGAGACTGAAAGATGAGAGATGGAGGGAGAGAGATGAGGTGACCTGTCCTTTATGGGG
ATTAAGGCTATAGTTATATTATCACCAAATTTCTATAAACTGAGCTAATGGGCCTAGACTCTAC
AAGGGCCCAAATAGGAGAATGGTACTTAGGGATGAAAAACCAGGGGCCTGGCTAGAGCTTTGGG
GTGTGTGTGAGTGTGTATGTGTAGTGACATGCATGCTTGCTCATGTGGTTTTGTTGTATGTAAA
TCTGCAAATTATGTGTGTCTATGTGTGTGTGCACGTGTGTGTACGTGTGTGTGTGTGAGAAAAA
TAAAGCTTAATTGTCCTGGAAGTTGTGCAGTGCTTTCCATTCATCATGGGTATCACGGGTACCT
GGGGTTTCTCACCTGCCCCCAAAAGAACACAGAACCTTTTG

hide sequence

RefSeq Acc Id:

XM_013359974 ⟹ XP_013215428

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	101,314,589 - 101,328,572 (-)	NCBI
SpeTri2.0	NW_004936542	4,235,924 - 4,244,975 (-)	NCBI

Sequence:

show sequence

CAGTGGAGCAATCATTCTGGGAGGTGTCCAAAGCTGGCCCAATTTCTCTGAGGCGGAGCAGAGG
AGCCTGAATGGGAGGCTCCCATTAGGGACACAGAGGACCTGATCTGCTATTCCTCCGCCAGGAG
GTCCCCCAGTGCTACACTGCATGGATCTACCCGGACTCCTCTGCGCCTTCTTGCTGGTCGTCTG
CTGCTGCTGTCGCCGCGCCACTGGTGTGCCTGGAGAGGCGGAGCAGCCCACACCAGAGCTGGTG
GAAGTGGAAGTGGGCAACACGGCCCTTCTGAGGTGTGGCCCTTCACACTCCCTGGGCAACCTCA
GCCATGTGGACTGGTTTTCTGTCTACAAGGAGAAGCCCACACTCATCTTCCGTGTGCGCCAGGG
CCAGGGTCAGAGTGAGCCTGGGGAGTACCAGCACCGTCTCAGCCTCCAGGGCCCAGGGGCTCTG
GCTCTGACTCAGGTCATGCCCCATGATGAGCGCATCTTCCTGTGCCAGAGTAAGCGTCCTCTGT
CCCAGGAGCACCGCATTCAGCTCCATGTCTTCAAAGCTCCAGAGGAGCCAACCATCCAGGCCAG
TGCCCTGGGCATCTCTGTAAACAGCAGGGAGCCTGAGGAGGTCGCCACCTGTATAGGGAGGAAT
GGGTACCCCGTTCCTCAAGTCATTTGGTACAAGAATCGTCTGCCCCTGATGGAGGAGAAAAATC
GCGTCCACATTCAGTCCTCGCAGATCGTGGAGTCAAGTGGCTTATACACCTTGAAGAGTGTTCT
GAAGGTACAGCTGGTTAAGGAAGACAAAGATGCCCGATTTTATTGTGAGCTCAGTTACCGACTG
CCCAGTGGGAACCACATGAAGGAATCTAGGGAAGTCACTGTCCCCGTTTTCTACCCAGCGGAAA
AAGTGTGGTTGGAAGTGGAGCCTGCAGGAATGCTGAAGGAAGGGGATCGTGTGGAAATCAGATG
TTTGGCGGATGGCAACCCCACACCTCCCTTCAGCATCTACAAGCAGAATCCCAGCACTAGGGAG
ATGGAGGAAGAGAGATCCACTGATAATGGCCTCCTGGTGCTGGAGCCTGCCCAGAAGCAGCACA
GCGGGCTCTATGAATGCCAGGGTCTGGACCTAGAAACCATGATACCACTGTTGAGTGAACCCCA
GGAGCTGCTGGTGAACTATGTGTCTGATGTTGACGTGAGTCCCGCAGCCCCTGCAGGCCAAGAA
GGCAGTAGCCTTACACTGACCTGCAAGGCAGAGAGTAACCAGGCCCTCGAGTTCCAGTGGCTGA
GAGAAAAGACAGGCCAAGTGCTGGAAAAGGGGTCTGTGCTTCACTTTGACCATCTGAAACGGGA
GATAGGAGGAGGCTACCGCTGCGTGGCATCTGTGCCCAGCGTACCTGGCCTGAACCGCACACAG
CTAGTCAATGTGGCCATTTTTGGTCCCCCATGGATGGCATCAAAGAAGAGGAAGGTGTGGGTGA
AAGAGAATACAATGCTTAATCTGTCTTGTGAAGCATCAGGACATCCTCGGCCCACCATCTCCTG
GGACATCAACGGGACTGCAAGTGAAGAATACCAAGATTCACAGAGGGTGCTGAGCACTCTGAAT
GTCCTTGTGACCCCAGAGCTGTTGGAGAGGGGCGCGGAATGCACAGCTTCCAATTCCCTGGGCA
GAAACAGCACCATCATCATCCTGGAGCTGGTCAGTTTAACCACCCTCGCACCAGACTCTAGCAA
AACAGCTGGCCTCAGCACCTCCACTGCCAGTCCTCATGCCAGAGCCAACAGCACCTCCACAGAG
AAAAAGCTGCGGGAGCAGGAGAGCAAGGGCGTGGTCATTGTGGCTGTGATCGTGTGCATCCTGG
TCCTGGCTGTGCTGGGCGCTGTCCTCTATTTCCTCTACAAGAAGGGCAAGCTGCTGTGTGGGCG
GTCAGGCAAACAAGAGATCACGCTGCCCCCGTCTCATAAGAGCGAATTTGTAGTTGAAGTTAAG
TCAGATAAGCTCCCAGAAGAGATGGGCCTCCTACAGGGCAGCAGCGGTGACAAGAGGGCTCCAG
GAGACCAGGGAGAGAAATACATCGATCTGAGGCATTAGCCATGGAATCACATTGGTTCTCTCCT
CACCTGGACAGTTTCTGGCTCCCTGCTCACTCTTTTCCCCAGCCAAAGCCCCCAAAGGGACTAC
AGAGAAGACCCTGCTCCAGCACACCTACAGATCAATTCTAGAGGGCTGTGGGCTAGGGCCAGAG
CCATCCCAAGAAGGACCTCACTTGGCCCTGGAGGCCCCCTTTTAGGGCCCAGTCCACCTCTATC
TCCACTTATGTGATGTTCAGAAGAGGCCTCAGTTCCCCACAAGTGACTGAAGTTTCTTGTAGAA
CATGTTTTCTCCTTAAATATGCTATAGCTATAAATACCTGTCTTCTACCAGCCCCTATCCTAGC
TGGTTTTCTGCCTACCCCTGCCAGGCTGGCTTTGGTAATCCATTTGTACCCCTGACATGAGAAG
GCACCAGGGCCCAGGTTCACTGTCACAGAATGCAGTTTTGCTGGCTCTGGAGAGTACGCTGTAG
TATCCGGAAGCAGTGGCAGAGTCGCTGCTATAACTTCCTGCCTGCCTCTTTTGTGACATTTTCT
CTTTGGGCTCAAATCAGGAACTGGTGTTATTTCCTCAAGAATATGTCCTGCAGGGAGGAAGCCA
GGTGACATTCCTGTGAAGACCTCTGAGCCTGAGCCTCTACATTTACATGGCTCCCAGTGCCCTC
AAAGGATCATGTGAGACTGAAAGATGAGAGATGGAGGGAGAGAGATGAGGTGACCTGTCCTTTA
TGGGGATTAAGGCTATAGTTATATTATCACCAAATTTCTATAAACTGAGCTAATGGGCCTAGAC
TCTACAAGGGCCCAAATAGGAGAATGGTACTTAGGGATGAAAAACCAGGGGCCTGGCTAGAGCT
TTGGGGTGTGTGTGAGTGTGTATGTGTAGTGACATGCATGCTTGCTCATGTGGTTTTGTTGTAT
GTAAATCTGCAAATTATGTGTGTCTATGTGTGTGTGCACGTGTGTGTACGTGTGTGTGTGTGAG
AAAAATAAAGCTTAATTGTCCTGGAAGTTGTGCAGTGCTTTCCATTCATCATGGGTATCACGGG
TACCTGGGGTTTCTCACCTGCCCCCAAAAGAACACA

hide sequence

RefSeq Acc Id:

XM_013359975 ⟹ XP_013215429

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	101,314,589 - 101,323,126 (-)	NCBI
SpeTri2.0	NW_004936542	4,235,914 - 4,244,981 (-)	NCBI

Sequence:

show sequence

GCCGCGCAGTGGAGCAATCATTCTGGGAGGTGTCCAAAGCTGGCCCAATTTCTCTGAGGCGGAG
CAGAGGAGCCTGAATGGGAGGCTCCCATTAGGGACACAGAGGACCTGATCTGCTATTCCTCCGC
CAGGAGGTCCCCCAGTGCTACACTGGTAAGGTCTGGGCTGGGGTGAACACCGCTGTGGCGATCT
GGGCCTTTCTGGGCATCCGGACCAGCTTCTCCTCGCTGCTTCCTCGGTCAGTCTGTCCGGCCCC
AAGACACCTGTCACTGCTCCCGTGGTGTGCTCAAACTGGGGGCTGGAAGGCGGGCTACGGCCTA
CCTCCGGCCGCGCTCTGGAGTGCGGCTTAGGGGCCGGCGCATCGGGGACCGCCCCCTAGGGCTG
CTGCGTGCGGGGGCGGGGGCGGGGGGCTGCGCGGGGCGGGGCAGGCCAGCGCTTGGGCCCCCTC
CCCCGCCCCCCTGACGTCAGCCCCCGGCAGTCGCAAGCTCCTCACTTGGCTCTCGTCCTCCGGC
CGGGAAGCATGGATCTACCCGGACTCCTCTGCGCCTTCTTGCTGGTCGTCTGCTGCTGCTGTCG
CCGCGCCACTGGTGTGCCTGGAGAGGCGGAGCAGCCCACACCAGAGCTGGTGGAAGTGGAAGTG
GGCAACACGGCCCTTCTGAGGTGTGGCCCTTCACACTCCCTGGGCAACCTCAGCCATGTGGACT
GGTTTTCTGTCTACAAGGAGAAGCCCACACTCATCTTCCGTGTGCGCCAGGGCCAGGGTCAGAG
TGAGCCTGGGGAGTACCAGCACCGTCTCAGCCTCCAGGGCCCAGGGGCTCTGGCTCTGACTCAG
GTCATGCCCCATGATGAGCGCATCTTCCTGTGCCAGAGTAAGCGTCCTCTGTCCCAGGAGCACC
GCATTCAGCTCCATGTCTTCAAAGCTCCAGAGGAGCCAACCATCCAGGCCAGTGCCCTGGGCAT
CTCTGTAAACAGCAGGGAGCCTGAGGAGGTCGCCACCTGTATAGGGAGGAATGGGTACCCCGTT
CCTCAAGTCATTTGGTACAAGAATCGTCTGCCCCTGATGGAGGAGAAAAATCGCGTCCACATTC
AGTCCTCGCAGATCGTGGAGTCAAGTGGCTTATACACCTTGAAGAGTGTTCTGAAGGTACAGCT
GGTTAAGGAAGACAAAGATGCCCGATTTTATTGTGAGCTCAGTTACCGACTGCCCAGTGGGAAC
CACATGAAGGAATCTAGGGAAGTCACTGTCCCCGTTTTCTACCCAGCGGAAAAAGTGTGGTTGG
AAGTGGAGCCTGCAGGAATGCTGAAGGAAGGGGATCGTGTGGAAATCAGATGTTTGGCGGATGG
CAACCCCACACCTCCCTTCAGCATCTACAAGCAGAATCCCAGCACTAGGGAGATGGAGGAAGAG
AGATCCACTGATAATGGCCTCCTGGTGCTGGAGCCTGCCCAGAAGCAGCACAGCGGGCTCTATG
AATGCCAGGGTCTGGACCTAGAAACCATGATACCACTGTTGAGTGAACCCCAGGAGCTGCTGGT
GAACTATGTGTCTGATGTTGACGTGAGTCCCGCAGCCCCTGCAGGCCAAGAAGGCAGTAGCCTT
ACACTGACCTGCAAGGCAGAGAGTAACCAGGCCCTCGAGTTCCAGTGGCTGAGAGAAAAGACAG
GCCAAGTGCTGGAAAAGGGGTCTGTGCTTCACTTTGACCATCTGAAACGGGAGATAGGAGGAGG
CTACCGCTGCGTGGCATCTGTGCCCAGCGTACCTGGCCTGAACCGCACACAGCTAGTCAATGTG
GCCATTTTTGGTCCCCCATGGATGGCATCAAAGAAGAGGAAGGTGTGGGTGAAAGAGAATACAA
TGCTTAATCTGTCTTGTGAAGCATCAGGACATCCTCGGCCCACCATCTCCTGGGACATCAACGG
GACTGCAAGTGAAGAATACCAAGATTCACAGAGGGTGCTGAGCACTCTGAATGTCCTTGTGACC
CCAGAGCTGTTGGAGAGGGGCGCGGAATGCACAGCTTCCAATTCCCTGGGCAGAAACAGCACCA
TCATCATCCTGGAGCTGGAGAAAAAGCTGCGGGAGCAGGAGAGCAAGGGCGTGGTCATTGTGGC
TGTGATCGTGTGCATCCTGGTCCTGGCTGTGCTGGGCGCTGTCCTCTATTTCCTCTACAAGAAG
GGCAAGCTGCTGTGTGGGCGGTCAGGCAAACAAGAGATCACGCTGCCCCCGTCTCATAAGAGCG
AATTTGTAGTTGAAGTTAAGTCAGATAAGCTCCCAGAAGAGATGGGCCTCCTACAGGGCAGCAG
CGGTGACAAGAGGGCTCCAGGAGACCAGGGAGAGAAATACATCGATCTGAGGCATTAGCCATGG
AATCACATTGGTTCTCTCCTCACCTGGACAGTTTCTGGCTCCCTGCTCACTCTTTTCCCCAGCC
AAAGCCCCCAAAGGGACTACAGAGAAGACCCTGCTCCAGCACACCTACAGATCAATTCTAGAGG
GCTGTGGGCTAGGGCCAGAGCCATCCCAAGAAGGACCTCACTTGGCCCTGGAGGCCCCCTTTTA
GGGCCCAGTCCACCTCTATCTCCACTTATGTGATGTTCAGAAGAGGCCTCAGTTCCCCACAAGT
GACTGAAGTTTCTTGTAGAACATGTTTTCTCCTTAAATATGCTATAGCTATAAATACCTGTCTT
CTACCAGCCCCTATCCTAGCTGGTTTTCTGCCTACCCCTGCCAGGCTGGCTTTGGTAATCCATT
TGTACCCCTGACATGAGAAGGCACCAGGGCCCAGGTTCACTGTCACAGAATGCAGTTTTGCTGG
CTCTGGAGAGTACGCTGTAGTATCCGGAAGCAGTGGCAGAGTCGCTGCTATAACTTCCTGCCTG
CCTCTTTTGTGACATTTTCTCTTTGGGCTCAAATCAGGAACTGGTGTTATTTCCTCAAGAATAT
GTCCTGCAGGGAGGAAGCCAGGTGACATTCCTGTGAAGACCTCTGAGCCTGAGCCTCTACATTT
ACATGGCTCCCAGTGCCCTCAAAGGATCATGTGAGACTGAAAGATGAGAGATGGAGGGAGAGAG
ATGAGGTGACCTGTCCTTTATGGGGATTAAGGCTATAGTTATATTATCACCAAATTTCTATAAA
CTGAGCTAATGGGCCTAGACTCTACAAGGGCCCAAATAGGAGAATGGTACTTAGGGATGAAAAA
CCAGGGGCCTGGCTAGAGCTTTGGGGTGTGTGTGAGTGTGTATGTGTAGTGACATGCATGCTTG
CTCATGTGGTTTTGTTGTATGTAAATCTGCAAATTATGTGTGTCTATGTGTGTGTGCACGTGTG
TGTACGTGTGTGTGTGTGAGAAAAATAAAGCTTAATTGTCCTGGAAGTTGTGCAGTGCTTTCCA
TTCATCATGGGTATCACGGGTACCTGGGGTTTCTCACCTGCCCCCAAAAGAACACAGAACCTTT
TG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005328424	(Get FASTA)	NCBI Sequence Viewer
	XP_005328425	(Get FASTA)	NCBI Sequence Viewer
	XP_013215428	(Get FASTA)	NCBI Sequence Viewer
	XP_013215429	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000018142.1
GenBank Protein	KAG3286721	(Get FASTA)	NCBI Sequence Viewer
	KAG3286722	(Get FASTA)	NCBI Sequence Viewer
	KAG3286723	(Get FASTA)	NCBI Sequence Viewer
	KAG3286724	(Get FASTA)	NCBI Sequence Viewer
	KAG3286725	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_013215429 ⟸ XM_013359975

- Peptide Label:

isoform X2

- Sequence:

show sequence

MDLPGLLCAFLLVVCCCCRRATGVPGEAEQPTPELVEVEVGNTALLRCGPSHSLGNLSHVDWFS
VYKEKPTLIFRVRQGQGQSEPGEYQHRLSLQGPGALALTQVMPHDERIFLCQSKRPLSQEHRIQ
LHVFKAPEEPTIQASALGISVNSREPEEVATCIGRNGYPVPQVIWYKNRLPLMEEKNRVHIQSS
QIVESSGLYTLKSVLKVQLVKEDKDARFYCELSYRLPSGNHMKESREVTVPVFYPAEKVWLEVE
PAGMLKEGDRVEIRCLADGNPTPPFSIYKQNPSTREMEEERSTDNGLLVLEPAQKQHSGLYECQ
GLDLETMIPLLSEPQELLVNYVSDVDVSPAAPAGQEGSSLTLTCKAESNQALEFQWLREKTGQV
LEKGSVLHFDHLKREIGGGYRCVASVPSVPGLNRTQLVNVAIFGPPWMASKKRKVWVKENTMLN
LSCEASGHPRPTISWDINGTASEEYQDSQRVLSTLNVLVTPELLERGAECTASNSLGRNSTIII
LELEKKLREQESKGVVIVAVIVCILVLAVLGAVLYFLYKKGKLLCGRSGKQEITLPPSHKSEFV
VEVKSDKLPEEMGLLQGSSGDKRAPGDQGEKYIDLRH

hide sequence

RefSeq Acc Id:

XP_005328425 ⟸ XM_005328368

- Peptide Label:

isoform X3

- Sequence:

show sequence

MDLPGLLCAFLLVVCCCCRRATGVPGEAEQPTPELVEVEVGNTALLRCGPSHSLGNLSHVDWFS
VYKEKPTLIFRVRQGQGQSEPGEYQHRLSLQGPGALALTQVMPHDERIFLCQSKRPLSQEHRIQ
LHVFKAPEEPTIQASALGISVNSREPEEVATCIGRNGYPVPQVIWYKNRLPLMEEKNRVHIQSS
QIVESSGLYTLKSVLKVQLVKEDKDARFYCELSYRLPSGNHMKESREVTVPVFYPAEKVWLEVE
PAGMLKEGDRVEIRCLADGNPTPPFSIYKQNPSTREMEEERSTDNGLLVLEPAQKQHSGLYECQ
GLDLETMIPLLSEPQELLVNYVSDVDVSPAAPAGQEGSSLTLTCKAESNQALEFQWLREKTGQV
LEKGSVLHFDHLKREIGGGYRCVASVPSVPGLNRTQLVNVAIFGPPWMASKKRKVWVKENTMLN
LSCEASGHPRPTISWDINGTASEEYQDSQRVLSTLNVLVTPELLERGAECTASNSLGRNSTIII
LELVSLTTLAPDSSKTAGLSTSTASPHARANSTSTEKKLREQESKGVVIVAVIVCILVLAVLGA
VLYFLYKKGKLLCGRSGKQEMERNTSI

hide sequence

RefSeq Acc Id:	XP_013215428 ⟸ XM_013359974
- Peptide Label:	isoform X1
- UniProtKB:	I3N196 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLPGLLCAFLLVVCCCCRRATGVPGEAEQPTPELVEVEVGNTALLRCGPSHSLGNLSHVDWFS VYKEKPTLIFRVRQGQGQSEPGEYQHRLSLQGPGALALTQVMPHDERIFLCQSKRPLSQEHRIQ LHVFKAPEEPTIQASALGISVNSREPEEVATCIGRNGYPVPQVIWYKNRLPLMEEKNRVHIQSS QIVESSGLYTLKSVLKVQLVKEDKDARFYCELSYRLPSGNHMKESREVTVPVFYPAEKVWLEVE PAGMLKEGDRVEIRCLADGNPTPPFSIYKQNPSTREMEEERSTDNGLLVLEPAQKQHSGLYECQ GLDLETMIPLLSEPQELLVNYVSDVDVSPAAPAGQEGSSLTLTCKAESNQALEFQWLREKTGQV LEKGSVLHFDHLKREIGGGYRCVASVPSVPGLNRTQLVNVAIFGPPWMASKKRKVWVKENTMLN LSCEASGHPRPTISWDINGTASEEYQDSQRVLSTLNVLVTPELLERGAECTASNSLGRNSTIII LELVSLTTLAPDSSKTAGLSTSTASPHARANSTSTEKKLREQESKGVVIVAVIVCILVLAVLGA VLYFLYKKGKLLCGRSGKQEITLPPSHKSEFVVEVKSDKLPEEMGLLQGSSGDKRAPGDQGEKY IDLRH hide sequence

RefSeq Acc Id:	XP_005328424 ⟸ XM_005328367
- Peptide Label:	isoform X1
- UniProtKB:	I3N196 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLPGLLCAFLLVVCCCCRRATGVPGEAEQPTPELVEVEVGNTALLRCGPSHSLGNLSHVDWFS VYKEKPTLIFRVRQGQGQSEPGEYQHRLSLQGPGALALTQVMPHDERIFLCQSKRPLSQEHRIQ LHVFKAPEEPTIQASALGISVNSREPEEVATCIGRNGYPVPQVIWYKNRLPLMEEKNRVHIQSS QIVESSGLYTLKSVLKVQLVKEDKDARFYCELSYRLPSGNHMKESREVTVPVFYPAEKVWLEVE PAGMLKEGDRVEIRCLADGNPTPPFSIYKQNPSTREMEEERSTDNGLLVLEPAQKQHSGLYECQ GLDLETMIPLLSEPQELLVNYVSDVDVSPAAPAGQEGSSLTLTCKAESNQALEFQWLREKTGQV LEKGSVLHFDHLKREIGGGYRCVASVPSVPGLNRTQLVNVAIFGPPWMASKKRKVWVKENTMLN LSCEASGHPRPTISWDINGTASEEYQDSQRVLSTLNVLVTPELLERGAECTASNSLGRNSTIII LELVSLTTLAPDSSKTAGLSTSTASPHARANSTSTEKKLREQESKGVVIVAVIVCILVLAVLGA VLYFLYKKGKLLCGRSGKQEITLPPSHKSEFVVEVKSDKLPEEMGLLQGSSGDKRAPGDQGEKY IDLRH hide sequence

RefSeq Acc Id:

ENSSTOP00000018142 ⟸ ENSSTOT00000020033

Protein Domains

Ig-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000019932	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000020033.2	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	CD80_C2-set	UniProtKB/TrEMBL
	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_sub2	UniProtKB/TrEMBL
	Ig_V-set	UniProtKB/TrEMBL
NCBI Gene	Mcam	ENTREZGENE
PANTHER	CELL SURFACE GLYCOPROTEIN MUC18	UniProtKB/TrEMBL
	CELL SURFACE GLYCOPROTEIN MUC18-RELATED	UniProtKB/TrEMBL
Pfam	C2-set_2	UniProtKB/TrEMBL
	Ig_3	UniProtKB/TrEMBL
	V-set	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
SMART	IGc2	UniProtKB/TrEMBL
	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	I3N196	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD