Nlrp14 (NLR family pyrin domain containing 14) - Rat Genome Database

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Gene: Nlrp14 (NLR family pyrin domain containing 14) Ictidomys tridecemlineatus
Analyze
Symbol: Nlrp14
Name: NLR family pyrin domain containing 14
RGD ID: 12683942
Description: INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); spermatogenic failure (ortholog); FOUND IN cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NACHT, LRR and PYD domains-containing protein 14
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494754,715,514 - 54,745,817 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936841341,505 - 371,728 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Nlrp14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494754,715,514 - 54,745,817 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936841341,505 - 371,728 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NLRP14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38117,020,446 - 7,090,900 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl117,020,479 - 7,071,526 (+)EnsemblGRCh38hg38GRCh38
GRCh37117,041,710 - 7,092,757 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36116,998,276 - 7,049,333 (+)NCBINCBI36Build 36hg18NCBI36
Build 34117,016,372 - 7,049,333NCBI
Celera117,160,740 - 7,211,803 (+)NCBICelera
Cytogenetic Map11p15.4NCBI
HuRef116,700,195 - 6,751,227 (+)NCBIHuRef
CHM1_1117,040,627 - 7,091,687 (+)NCBICHM1_1
T2T-CHM13v2.0117,078,824 - 7,149,635 (+)NCBIT2T-CHM13v2.0
Nlrp14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397106,712,662 - 106,797,310 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7106,766,197 - 106,797,309 (+)EnsemblGRCm39 Ensembl
GRCm387107,113,455 - 107,198,103 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7107,166,990 - 107,198,102 (+)EnsemblGRCm38mm10GRCm38
MGSCv377114,310,504 - 114,341,617 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367106,958,167 - 106,989,279 (+)NCBIMGSCv36mm8
Celera7107,162,901 - 107,194,394 (+)NCBICelera
Cytogenetic Map7E3NCBI
cM Map756.1NCBI
Nlrp14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81170,472,956 - 170,500,962 (+)NCBIGRCr8
mRatBN7.21161,069,141 - 161,089,158 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1161,061,165 - 161,089,222 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01171,305,558 - 171,340,428 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1171,306,049 - 171,340,493 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01178,325,007 - 178,343,264 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41164,520,792 - 164,537,945 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1158,973,913 - 159,002,277 (+)NCBICelera
Cytogenetic Map1q33NCBI
Nlrp14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541422,885,205 - 22,914,343 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541422,885,226 - 22,914,254 (+)NCBIChiLan1.0ChiLan1.0
NLRP14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v299,426,349 - 9,549,015 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1119,391,774 - 9,443,639 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0117,122,928 - 7,174,772 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1116,805,331 - 6,856,718 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl116,805,331 - 6,856,718 (+)Ensemblpanpan1.1panPan2
NLRP14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12130,713,700 - 30,922,332 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2130,713,351 - 30,907,113 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2130,284,577 - 30,328,235 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02131,522,062 - 31,566,213 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2131,522,374 - 31,701,331 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12130,852,579 - 30,894,542 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02131,015,517 - 31,059,147 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02131,310,739 - 31,354,651 (+)NCBIUU_Cfam_GSD_1.0
NLRP14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.192,542,538 - 2,550,430 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.293,013,131 - 3,026,295 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NLRP14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1157,659,342 - 57,793,848 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl157,752,336 - 57,786,254 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038155,503,131 - 155,539,286 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nlrp14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248178,804,529 - 8,832,874 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248178,804,708 - 8,832,251 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_040284833   ⟹   XP_040140767
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494754,715,514 - 54,745,817 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040140767 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000012288.3
GenBank Protein KAG3285802 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040140767   ⟸   XM_040284833


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000013707 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000013711.3 UniProtKB/TrEMBL
Gene3D-CATH 3.80.10.10 UniProtKB/TrEMBL
InterPro Leu-rich_rpt UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
NCBI Gene Nlrp14 ENTREZGENE
PANTHER NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 UniProtKB/TrEMBL
  NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 14 UniProtKB/TrEMBL
Pfam LRR_6 UniProtKB/TrEMBL
SMART LRR_RI UniProtKB/TrEMBL
Superfamily-SCOP RNI-like UniProtKB/TrEMBL
UniProt I3MLJ4_ICTTR UniProtKB/TrEMBL