Dlg4 (discs large MAGUK scaffold protein 4) - Rat Genome Database

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Gene: Dlg4 (discs large MAGUK scaffold protein 4) Ictidomys tridecemlineatus
Analyze
Symbol: Dlg4
Name: discs large MAGUK scaffold protein 4
RGD ID: 12681817
Description: ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); beta-1 adrenergic receptor binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to potassium ion (ortholog); dendritic spine morphogenesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); Autosomal Dominant Mental Retardation 62 (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); anchored component of postsynaptic density membrane (ortholog); cell junction (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: disks large homolog 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560247,013,899 - 47,039,640 (-)NCBI
SpeTri2.0NW_004936595487,918 - 513,843 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
Dlg4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560247,013,899 - 47,039,640 (-)NCBI
SpeTri2.0NW_004936595487,918 - 513,843 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DLG4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl177,187,187 - 7,219,841 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl177,187,169 - 7,219,841 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl177,189,890 - 7,219,841 (-)EnsemblGRCh38hg38GRCh38
GRCh38177,187,187 - 7,220,050 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37177,090,506 - 7,123,369 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,033,933 - 7,063,781 (-)NCBINCBI36hg18NCBI36
Build 34177,033,935 - 7,063,745NCBI
Celera177,117,875 - 7,148,003 (-)NCBI
Cytogenetic Map17p13.1NCBI
HuRef176,984,911 - 7,015,359 (-)NCBIHuRef
CHM1_1177,102,006 - 7,132,134 (-)NCBICHM1_1
Dlg4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,908,029 - 69,938,107 (+)NCBIGRCm39mm39
GRCm39 Ensembl1169,907,768 - 69,938,348 (+)Ensembl
GRCm381170,017,203 - 70,045,535 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,016,942 - 70,047,522 (+)EnsemblGRCm38mm10GRCm38
MGSCv371169,832,107 - 69,859,034 (+)NCBIGRCm37mm9NCBIm37
MGSCv361169,835,059 - 69,860,963 (+)NCBImm8
Celera1177,566,529 - 77,594,216 (+)NCBICelera
Cytogenetic Map11B3NCBI
Dlg4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21054,740,700 - 54,769,097 (+)NCBI
Rnor_6.0 Ensembl1056,627,411 - 56,653,599 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01056,625,845 - 56,655,543 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01056,369,703 - 56,400,662 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,864,459 - 56,890,626 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11056,878,081 - 56,904,246 (+)NCBI
Celera1053,894,685 - 53,920,691 (+)NCBICelera
Cytogenetic Map10q24NCBI
Dlg4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554679,690,469 - 9,715,872 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554679,691,733 - 9,715,872 (+)NCBIChiLan1.0ChiLan1.0
DLG4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1177,207,483 - 7,236,000 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,207,483 - 7,235,985 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0177,219,911 - 7,247,509 (-)NCBIMhudiblu_PPA_v0panPan3
DLG4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1532,165,399 - 32,175,600 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl532,163,594 - 32,188,126 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha532,303,501 - 32,327,281 (-)NCBI
ROS_Cfam_1.0532,271,402 - 32,294,586 (-)NCBI
UMICH_Zoey_3.1532,236,680 - 32,259,896 (-)NCBI
UNSW_CanFamBas_1.0532,195,151 - 32,218,943 (-)NCBI
UU_Cfam_GSD_1.0532,372,643 - 32,395,864 (-)NCBI
DLG4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,550,141 - 52,575,156 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,550,138 - 52,574,021 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23139,824,633 - 139,849,233 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DLG4
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1166,562,953 - 6,592,247 (-)NCBI
ChlSab1.1 Ensembl166,562,691 - 6,590,867 (-)Ensembl
Dlg4
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247869,811,201 - 9,835,660 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005332762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013361746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013361747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021731331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021731332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021731333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021731335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021731336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021731337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021731338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021731339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005332762   ⟹   XP_005332819
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,038,391 (-)NCBI
SpeTri2.0NW_004936595487,918 - 512,579 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013361746   ⟹   XP_013217200
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,038,352 (-)NCBI
SpeTri2.0NW_004936595487,918 - 512,196 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013361747   ⟹   XP_013217201
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,039,640 (-)NCBI
SpeTri2.0NW_004936595487,918 - 513,843 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021731331   ⟹   XP_021587006
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,039,640 (-)NCBI
SpeTri2.0NW_004936595487,918 - 513,843 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021731332   ⟹   XP_021587007
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,039,640 (-)NCBI
SpeTri2.0NW_004936595487,918 - 513,843 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021731333   ⟹   XP_021587008
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_004936595487,918 - 507,556 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021731335   ⟹   XP_021587010
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,038,355 (-)NCBI
SpeTri2.0NW_004936595487,918 - 512,197 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021731336   ⟹   XP_021587011
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_004936595487,918 - 505,271 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021731337   ⟹   XP_021587012
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_004936595487,918 - 511,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021731338   ⟹   XP_021587013
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,028,583 (-)NCBI
SpeTri2.0NW_004936595487,918 - 503,871 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021731339   ⟹   XP_021587014
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_004936595487,918 - 501,838 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040269313   ⟹   XP_040125247
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,039,640 (-)NCBI
RefSeq Acc Id: XM_040269314   ⟹   XP_040125248
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,033,380 (-)NCBI
RefSeq Acc Id: XM_040269315   ⟹   XP_040125249
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,033,380 (-)NCBI
RefSeq Acc Id: XM_040269316   ⟹   XP_040125250
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,038,354 (-)NCBI
RefSeq Acc Id: XM_040269317   ⟹   XP_040125251
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,033,380 (-)NCBI
RefSeq Acc Id: XM_040269318   ⟹   XP_040125252
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,033,380 (-)NCBI
RefSeq Acc Id: XM_040269319   ⟹   XP_040125253
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,033,380 (-)NCBI
RefSeq Acc Id: XM_040269320   ⟹   XP_040125254
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,033,380 (-)NCBI
RefSeq Acc Id: XM_040269321   ⟹   XP_040125255
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,038,353 (-)NCBI
RefSeq Acc Id: XM_040269322   ⟹   XP_040125256
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,014,710 - 47,039,640 (-)NCBI
RefSeq Acc Id: XM_040269323   ⟹   XP_040125257
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,038,353 (-)NCBI
RefSeq Acc Id: XM_040269324   ⟹   XP_040125258
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560247,013,899 - 47,028,582 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_013217201   ⟸   XM_013361747
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_005332819   ⟸   XM_005332762
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_013217200   ⟸   XM_013361746
- Peptide Label: isoform X13
- UniProtKB: A0A287DAB5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021587007   ⟸   XM_021731332
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_021587006   ⟸   XM_021731331
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_021587010   ⟸   XM_021731335
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_021587012   ⟸   XM_021731337
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_021587008   ⟸   XM_021731333
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_021587011   ⟸   XM_021731336
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_021587013   ⟸   XM_021731338
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_021587014   ⟸   XM_021731339
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_040125247   ⟸   XM_040269313
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040125250   ⟸   XM_040269316
- Peptide Label: isoform X7
RefSeq Acc Id: XP_040125257   ⟸   XM_040269323
- Peptide Label: isoform X17
RefSeq Acc Id: XP_040125255   ⟸   XM_040269321
- Peptide Label: isoform X15
RefSeq Acc Id: XP_040125254   ⟸   XM_040269320
- Peptide Label: isoform X12
RefSeq Acc Id: XP_040125253   ⟸   XM_040269319
- Peptide Label: isoform X11
RefSeq Acc Id: XP_040125249   ⟸   XM_040269315
- Peptide Label: isoform X6
RefSeq Acc Id: XP_040125252   ⟸   XM_040269318
- Peptide Label: isoform X10
RefSeq Acc Id: XP_040125251   ⟸   XM_040269317
- Peptide Label: isoform X9
RefSeq Acc Id: XP_040125248   ⟸   XM_040269314
- Peptide Label: isoform X4
RefSeq Acc Id: XP_040125258   ⟸   XM_040269324
- Peptide Label: isoform X18
RefSeq Acc Id: XP_040125256   ⟸   XM_040269322
- Peptide Label: isoform X16
Protein Domains
Guanylate kinase-like   PDZ   SH3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000008559 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000007680 UniProtKB/TrEMBL
  ENSSTOP00000024732 ENTREZGENE, UniProtKB/TrEMBL
  ENSSTOP00000030500 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000008567 UniProtKB/TrEMBL
  ENSSTOT00000037058 UniProtKB/TrEMBL
  ENSSTOT00000038379 UniProtKB/TrEMBL
Gene3D-CATH 2.30.42.10 UniProtKB/TrEMBL
InterPro DLG1-like UniProtKB/TrEMBL
  DLG1_PEST_dom UniProtKB/TrEMBL
  GK/Ca_channel_bsu UniProtKB/TrEMBL
  Guanylate_kin-like_dom UniProtKB/TrEMBL
  Guanylate_kinase_CS UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_assoc UniProtKB/TrEMBL
  PDZ_sf UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
NCBI Gene Dlg4 ENTREZGENE
Pfam Guanylate_kin UniProtKB/TrEMBL
  MAGUK_N_PEST UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_assoc UniProtKB/TrEMBL
  SH3_1 UniProtKB/TrEMBL
PIRSF MAGUK_DLGH UniProtKB/TrEMBL
PROSITE GUANYLATE_KINASE_1 UniProtKB/TrEMBL
  GUANYLATE_KINASE_2 UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
SMART GuKc UniProtKB/TrEMBL
  MAGUK_N_PEST UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
Superfamily-SCOP SSF50044 UniProtKB/TrEMBL
  SSF50156 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A287CTW7_ICTTR UniProtKB/TrEMBL
  A0A287DAB5 ENTREZGENE, UniProtKB/TrEMBL
  I3MBV6_ICTTR UniProtKB/TrEMBL