LOC101972122 (olfactory receptor 5B17-like) - Rat Genome Database

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Pathways
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Gene: LOC101972122 (olfactory receptor 5B17-like) Ictidomys tridecemlineatus
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Symbol: LOC101972122
Name: olfactory receptor 5B17-like
RGD ID: 12679626
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); odorant binding (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494714,235,159 - 14,236,584 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365814,348,981 - 4,350,406 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005331669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005331669   ⟹   XP_005331726
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494714,235,159 - 14,236,584 (+)NCBI
SpeTri2.0NW_0049365814,348,981 - 4,350,406 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005331726 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000014563.3
GenBank Protein KAG3285029 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005331726   ⟸   XM_005331669
- UniProtKB: I3MR82 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000023550 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000016266.3 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC101972122 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 5B17 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt I3MR82 ENTREZGENE, UniProtKB/TrEMBL