LOC101978646 (aldo-keto reductase family 1 member C23-like protein) - Rat Genome Database

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Gene: LOC101978646 (aldo-keto reductase family 1 member C23-like protein) Ictidomys tridecemlineatus
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Symbol: LOC101978646
Name: aldo-keto reductase family 1 member C23-like protein
RGD ID: 12677096
Description: ENCODES a protein that exhibits aldose reductase (NADPH) activity (inferred); ketosteroid monooxygenase activity (inferred); oxidoreductase activity (inferred); INVOLVED IN steroid metabolic process (inferred); FOUND IN cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934433,078,362 - 33,093,163 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049364849,243,593 - 9,258,140 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005320320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010004404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005320320   ⟹   XP_005320377
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934433,078,362 - 33,093,163 (+)NCBI
SpeTri2.0NW_0049364849,243,593 - 9,258,140 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005320377 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000003215.3
GenBank Protein KAG3257766 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005320377   ⟸   XM_005320320
- Sequence:
Protein Domains
NADP-dependent oxidoreductase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000020872 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000003589.3 UniProtKB/TrEMBL
Gene3D-CATH 3.20.20.100 UniProtKB/TrEMBL
InterPro AKR UniProtKB/TrEMBL
  Aldo/ket_reductase_CS UniProtKB/TrEMBL
  NADP_OxRdtase_dom UniProtKB/TrEMBL
  NADP_OxRdtase_dom_sf UniProtKB/TrEMBL
NCBI Gene LOC101978646 ENTREZGENE
PANTHER ALDO-KETO REDUCTASE FAMILY 1 MEMBER C3 UniProtKB/TrEMBL
  ALDO/KETO REDUCTASE UniProtKB/TrEMBL
Pfam Aldo_ket_red UniProtKB/TrEMBL
PIRSF AKR UniProtKB/TrEMBL
PRINTS ALDKETRDTASE UniProtKB/TrEMBL
PROSITE ALDOKETO_REDUCTASE_1 UniProtKB/TrEMBL
  ALDOKETO_REDUCTASE_2 UniProtKB/TrEMBL
  ALDOKETO_REDUCTASE_3 UniProtKB/TrEMBL
Superfamily-SCOP SSF51430 UniProtKB/TrEMBL
UniProt I3M2J8_ICTTR UniProtKB/TrEMBL