Ak5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405058 | 88,672,098 - 88,909,204 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936571 | 4,182,444 - 4,418,381 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936571 | 4,182,450 - 4,418,384 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AK5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 77,282,019 - 77,559,966 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 77,282,019 - 77,559,966 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 77,747,704 - 78,025,651 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 77,520,330 - 77,798,242 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 77,459,762 - 77,737,673 | NCBI | | | | | Celera | 1 | 75,987,128 - 76,265,178 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | p31.1 | NCBI | | | | | HuRef | 1 | 75,878,838 - 76,157,458 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 77,863,034 - 78,141,541 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 77,120,194 - 77,398,823 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ak5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 152,168,461 - 152,373,992 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 152,168,452 - 152,373,997 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 152,462,815 - 152,668,406 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 152,462,815 - 152,668,360 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 152,125,779 - 152,331,104 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 152,400,201 - 152,605,526 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 158,931,196 - 159,122,453 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | H3 | NCBI | | | | | cM Map | 3 | 77.16 | NCBI | | | | |
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Ak5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 244,057,240 - 244,241,372 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 241,397,297 - 241,581,483 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 241,397,297 - 241,581,458 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 249,210,841 - 249,399,413 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 247,097,854 - 247,286,423 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 241,997,408 - 242,186,391 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 257,671,772 - 257,864,385 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 257,671,772 - 257,864,385 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 276,349,770 - 276,531,733 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 2 | 233,329,800 - 233,512,494 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q45 | NCBI | | | | |
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Ak5 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955423 | 15,587,233 - 15,796,314 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955423 | 15,587,233 - 15,796,314 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AK5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 149,329,547 - 149,610,065 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 148,492,330 - 148,772,160 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 76,499,046 - 76,778,856 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 78,584,653 - 78,863,844 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 78,584,653 - 78,863,844 (+) | Ensembl | panpan1.1 | | panPan2 | |
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AK5 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 6 | 69,282,997 - 69,520,903 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 6 | 69,284,288 - 69,521,020 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 71,941,051 - 72,178,506 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 69,869,373 - 70,108,061 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 6 | 69,869,379 - 70,139,451 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 6 | 69,374,102 - 69,611,148 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 69,320,227 - 69,557,015 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 69,806,208 - 70,043,686 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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AK5 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 6 | 135,745,881 - 136,020,541 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 135,745,879 - 136,020,585 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 125,949,135 - 126,223,268 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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AK5 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 20 | 55,617,768 - 55,901,695 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 55,619,046 - 55,901,639 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 61,612,658 - 61,900,965 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ak5 (Heterocephalus glaber - naked mole-rat) |
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