Mpzl2 (myelin protein zero like 2) - Rat Genome Database

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Gene: Mpzl2 (myelin protein zero like 2) Ictidomys tridecemlineatus
Analyze
Symbol: Mpzl2
Name: myelin protein zero like 2
RGD ID: 12667666
Description: INVOLVED IN cell-cell adhesion (ortholog); T cell differentiation in thymus (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 111 (ortholog); CD3epsilon deficiency (ortholog); Chromosome 11, Partial Trisomy 11q (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: myelin protein zero-like protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947100,412,421 - 100,423,313 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365423,333,830 - 3,343,852 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365423,332,822 - 3,344,663 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mpzl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947100,412,421 - 100,423,313 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365423,333,830 - 3,343,852 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365423,332,822 - 3,344,663 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MPZL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811118,253,416 - 118,264,297 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11118,253,416 - 118,264,536 (-)EnsemblGRCh38hg38GRCh38
GRCh3711118,124,131 - 118,135,012 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611117,629,344 - 117,640,219 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411117,632,836 - 117,640,219NCBI
Celera11115,282,009 - 115,293,130 (-)NCBICelera
Cytogenetic Map11q23.3NCBI
HuRef11114,057,725 - 114,068,846 (-)NCBIHuRef
CHM1_111118,010,121 - 118,021,238 (-)NCBICHM1_1
T2T-CHM13v2.011118,269,772 - 118,280,653 (-)NCBIT2T-CHM13v2.0
Mpzl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39944,951,595 - 44,965,341 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl944,951,097 - 44,965,313 (+)EnsemblGRCm39 Ensembl
GRCm38945,042,344 - 45,054,043 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl945,039,799 - 45,054,015 (+)EnsemblGRCm38mm10GRCm38
MGSCv37944,850,427 - 44,862,126 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36944,793,552 - 44,805,007 (+)NCBIMGSCv36mm8
Celera942,317,403 - 42,329,166 (+)NCBICelera
Cytogenetic Map9A5.2NCBI
cM Map924.84NCBI
Mpzl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8854,244,920 - 54,256,064 (+)NCBIGRCr8
mRatBN7.2845,348,285 - 45,359,298 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl845,348,285 - 45,359,298 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx850,843,848 - 50,854,747 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0849,122,587 - 49,133,486 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0846,993,141 - 47,004,040 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0849,342,067 - 49,353,080 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl849,342,067 - 49,353,080 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0847,959,127 - 47,980,096 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4847,991,599 - 48,003,100 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1848,000,623 - 48,010,534 (+)NCBI
Celera844,934,312 - 44,945,501 (+)NCBICelera
Cytogenetic Map8q22NCBI
Mpzl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541219,422,537 - 19,434,596 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541219,422,532 - 19,434,596 (-)NCBIChiLan1.0ChiLan1.0
MPZL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29118,957,497 - 118,968,498 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111120,062,474 - 120,073,480 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011113,063,961 - 113,102,097 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111117,023,102 - 117,034,209 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11117,023,102 - 117,034,209 (-)Ensemblpanpan1.1panPan2
MPZL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1515,446,803 - 15,458,667 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl515,447,104 - 15,458,515 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha515,497,525 - 15,510,264 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0515,388,932 - 15,401,457 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl515,389,046 - 15,401,457 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1515,527,149 - 15,539,697 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0515,430,679 - 15,443,207 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0515,471,780 - 15,484,528 (+)NCBIUU_Cfam_GSD_1.0
MPZL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl945,565,513 - 45,578,185 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1945,566,365 - 45,578,168 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2950,607,407 - 50,619,210 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MPZL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11109,635,053 - 109,645,142 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1109,633,493 - 109,645,145 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604316,387,120 - 16,397,553 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mpzl2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478413,672,672 - 13,684,612 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000014516   ⟹   ENSSTOP00000013006
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365423,333,830 - 3,343,852 (-)Ensembl
RefSeq Acc Id: XM_005328322   ⟹   XP_005328379
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404947100,412,421 - 100,422,437 (-)NCBI
SpeTri2.0NW_0049365423,332,822 - 3,344,663 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040285308   ⟹   XP_040141242
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404947100,412,421 - 100,422,440 (-)NCBI
RefSeq Acc Id: XM_040285309   ⟹   XP_040141243
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404947100,412,421 - 100,423,313 (-)NCBI
RefSeq Acc Id: XM_040285310   ⟹   XP_040141244
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404947100,415,214 - 100,422,441 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005328379 (Get FASTA)   NCBI Sequence Viewer  
  XP_040141242 (Get FASTA)   NCBI Sequence Viewer  
  XP_040141243 (Get FASTA)   NCBI Sequence Viewer  
  XP_040141244 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000013006.3
GenBank Protein KAG3286640 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005328379   ⟸   XM_005328322
- Peptide Label: isoform X2
- UniProtKB: I3MN30 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040141243   ⟸   XM_040285309
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040141242   ⟸   XM_040285308
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040141244   ⟸   XM_040285310
- Peptide Label: isoform X2
- UniProtKB: I3MN30 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000013006   ⟸   ENSSTOT00000014516
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000014520 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000014516.3 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_V-set UniProtKB/TrEMBL
  MPZL2 UniProtKB/TrEMBL
  Myelin_P0-rel UniProtKB/TrEMBL
NCBI Gene Mpzl2 ENTREZGENE
PANTHER PTHR13869 UniProtKB/TrEMBL
  PTHR13869:SF21 UniProtKB/TrEMBL
Pfam V-set UniProtKB/TrEMBL
PRINTS MYELINP0 UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART IGv UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt I3MN30 ENTREZGENE, UniProtKB/TrEMBL