Epb41l5 (erythrocyte membrane protein band 4.1 like 5) - Rat Genome Database

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Gene: Epb41l5 (erythrocyte membrane protein band 4.1 like 5) Ictidomys tridecemlineatus
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Symbol: Epb41l5
Name: erythrocyte membrane protein band 4.1 like 5
RGD ID: 12662816
Description: ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); apical constriction (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); focal adhesion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: band 4.1-like protein 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530391,174,199 - 91,288,156 (+)NCBI
SpeTri2.0NW_00493646950,329,564 - 50,443,532 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Epb41l5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530391,174,199 - 91,288,156 (+)NCBI
SpeTri2.0NW_00493646950,329,564 - 50,443,532 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPB41L5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2120,013,077 - 120,179,119 (+)EnsemblGRCh38hg38GRCh38
GRCh382120,013,032 - 120,179,119 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372120,770,653 - 120,936,695 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362120,487,139 - 120,653,165 (+)NCBINCBI36hg18NCBI36
Build 342120,486,898 - 120,652,924NCBI
Celera2114,097,494 - 114,263,547 (+)NCBI
Cytogenetic Map2q14.2NCBI
HuRef2113,095,033 - 113,261,073 (+)NCBIHuRef
CHM1_12120,775,048 - 120,941,099 (+)NCBICHM1_1
Epb41l5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391119,472,762 - 119,576,826 (-)NCBIGRCm39mm39
GRCm39 Ensembl1119,472,767 - 119,576,730 (-)Ensembl
GRCm381119,545,032 - 119,649,096 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1119,545,037 - 119,649,000 (-)EnsemblGRCm38mm10GRCm38
MGSCv371121,441,610 - 121,545,577 (-)NCBIGRCm37mm9NCBIm37
MGSCv361121,375,677 - 121,476,482 (-)NCBImm8
Celera1122,204,130 - 122,307,894 (-)NCBICelera
Cytogenetic Map1E2.3NCBI
Epb41l5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21330,673,052 - 30,770,213 (-)NCBI
Rnor_6.0 Ensembl1335,580,098 - 35,668,968 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01335,622,472 - 35,673,449 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01340,736,725 - 40,787,937 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41332,373,377 - 32,426,745 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11332,376,201 - 32,429,569 (-)NCBI
Celera1330,609,949 - 30,662,208 (-)NCBICelera
Cytogenetic Map13q11NCBI
Epb41l5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554599,641,884 - 9,784,173 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554599,641,926 - 9,783,718 (-)NCBIChiLan1.0ChiLan1.0
EPB41L5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B120,521,139 - 120,687,209 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B120,521,145 - 120,687,209 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B6,945,289 - 7,111,595 (+)NCBIMhudiblu_PPA_v0panPan3
EPB41L5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11929,916,994 - 30,063,243 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1929,921,636 - 30,063,216 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1930,241,913 - 30,319,328 (-)NCBI
ROS_Cfam_1.01931,292,585 - 31,438,670 (-)NCBI
UMICH_Zoey_3.11930,047,561 - 30,124,750 (-)NCBI
UNSW_CanFamBas_1.01930,217,313 - 30,294,837 (-)NCBI
UU_Cfam_GSD_1.01931,402,865 - 31,477,654 (-)NCBI
EPB41L5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1531,159,217 - 31,295,896 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11531,159,214 - 31,295,891 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21536,469,281 - 36,530,372 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EPB41L5
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11010,113,695 - 10,288,003 (-)NCBI
ChlSab1.1 Ensembl1010,121,075 - 10,287,954 (-)Ensembl
Epb41l5
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473224,908,711 - 25,088,246 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005315912   ⟹   XP_005315969
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530391,174,201 - 91,288,156 (+)NCBI
SpeTri2.0NW_00493646950,329,564 - 50,443,531 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013365577   ⟹   XP_013221031
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530391,174,200 - 91,288,156 (+)NCBI
SpeTri2.0NW_00493646950,329,564 - 50,443,531 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021722015   ⟹   XP_021577690
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530391,174,199 - 91,230,538 (+)NCBI
SpeTri2.0NW_00493646950,387,429 - 50,443,532 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005315969 (Get FASTA)   NCBI Sequence Viewer  
  XP_013221031 (Get FASTA)   NCBI Sequence Viewer  
  XP_021577690 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013221031   ⟸   XM_013365577
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005315969   ⟸   XM_005315912
- Peptide Label: isoform X1
- UniProtKB: I3MQQ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021577690   ⟸   XM_021722015
- Peptide Label: isoform X3
- Sequence:
Protein Domains
FERM


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000015989 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000014309 ENTREZGENE, UniProtKB/TrEMBL
  ENSSTOP00000025950 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000015990 UniProtKB/TrEMBL
  ENSSTOT00000038963 UniProtKB/TrEMBL
Gene3D-CATH 1.20.80.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
InterPro Band4.1-like5 UniProtKB/TrEMBL
  Band_41_domain UniProtKB/TrEMBL
  Ez/rad/moesin-like UniProtKB/TrEMBL
  FERM-adjacent UniProtKB/TrEMBL
  FERM/acyl-CoA-bd_prot_3-hlx UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_central UniProtKB/TrEMBL
  FERM_CS UniProtKB/TrEMBL
  FERM_domain UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
  FERM_PH-like_C UniProtKB/TrEMBL
  PH_dom-like UniProtKB/TrEMBL
  Ubiquitin-rel_dom UniProtKB/TrEMBL
NCBI Gene Epb41l5 ENTREZGENE
PANTHER PTHR23280:SF15 UniProtKB/TrEMBL
Pfam FERM_C UniProtKB/TrEMBL
  FERM_M UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
  PF08736 UniProtKB/TrEMBL
PRINTS BAND41 UniProtKB/TrEMBL
  ERMFAMILY UniProtKB/TrEMBL
PROSITE FERM_1 UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_3 UniProtKB/TrEMBL
SMART B41 UniProtKB/TrEMBL
  FERM_C UniProtKB/TrEMBL
  SM01195 UniProtKB/TrEMBL
Superfamily-SCOP SSF47031 UniProtKB/TrEMBL
  SSF54236 UniProtKB/TrEMBL
UniProt A0A287CX95_ICTTR UniProtKB/TrEMBL
  I3MQQ5 ENTREZGENE, UniProtKB/TrEMBL