Dxo (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 35,982,182 - 35,984,452 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936727 | 1,576,886 - 1,579,154 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936727 | 1,576,823 - 1,579,158 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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DXO (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 6 | 31,969,815 - 31,972,138 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 31,969,810 - 31,972,290 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 31,937,592 - 31,939,915 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 32,045,567 - 32,048,011 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 32,045,566 - 32,048,011 | NCBI | | | | | Celera | 6 | 33,537,350 - 33,539,794 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | p21.33 | NCBI | | | | | HuRef | 6 | 31,724,525 - 31,726,969 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 31,939,669 - 31,942,113 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 31,823,020 - 31,825,343 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Dxo (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 17 | 35,055,998 - 35,058,162 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 17 | 35,055,995 - 35,058,209 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 17 | 34,836,996 - 34,839,187 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 17 | 34,837,019 - 34,839,233 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 17 | 34,973,964 - 34,976,131 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 17 | 34,445,139 - 34,447,289 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 17 | 37,932,348 - 37,934,515 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | B1 | NCBI | | | | | cM Map | 17 | 18.39 | NCBI | | | | |
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Dxo (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 20 | 3,997,953 - 4,000,115 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 20 | 3,993,322 - 3,995,484 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 20 | 3,993,327 - 3,995,494 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 20 | 4,693,280 - 4,695,364 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 20 | 4,055,028 - 4,057,112 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 20 | 4,592,209 - 4,594,293 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 20 | 4,517,307 - 4,519,391 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 20 | 4,517,307 - 4,519,389 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 20 | 6,597,106 - 6,599,190 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 20 | 4,093,718 - 4,095,802 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 20 | 4,093,893 - 4,096,049 (-) | NCBI | | | | | Celera | 20 | 4,035,291 - 4,037,375 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | p12 | NCBI | | | | |
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Dxo (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955437 | 481,554 - 484,989 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955437 | 482,866 - 484,989 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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DXO (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 5 | 46,446,379 - 46,448,629 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 42,407,867 - 42,410,121 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 31,630,523 - 31,632,363 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 32,517,086 - 32,519,566 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 32,517,086 - 32,519,566 (-) | Ensembl | panpan1.1 | | panPan2 | |
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DXO (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 12 | 1,424,584 - 1,426,275 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 1,424,591 - 1,426,452 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 1,559,785 - 1,562,016 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 1,566,885 - 1,568,996 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 1,566,892 - 1,568,726 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 1,424,344 - 1,426,575 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 1,492,527 - 1,494,758 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 1,559,127 - 1,561,358 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
DXO (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 24,056,525 - 24,060,011 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 24,057,670 - 24,060,108 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 27,752,093 - 27,754,531 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
DXO (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 17 | 40,049,679 - 40,052,114 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 17 | 40,050,257 - 40,052,050 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666044 | 31,886,210 - 31,888,644 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Dxo (Heterocephalus glaber - naked mole-rat) |
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