Wac (WW domain containing adaptor with coiled-coil) - Rat Genome Database

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Gene: Wac (WW domain containing adaptor with coiled-coil) Ictidomys tridecemlineatus
Analyze
Symbol: Wac
Name: WW domain containing adaptor with coiled-coil
RGD ID: 12654943
Description: ENCODES a protein that exhibits chromatin binding (inferred); RNA polymerase II complex binding (inferred); INVOLVED IN chromatin organization (inferred); chromatin remodeling (inferred); DNA damage response (inferred); ASSOCIATED WITH DeSanto-Shinawi syndrome (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred); spliceosomal complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: WW domain containing adaptor with coiled-coil, transcript variant X1; WW domain containing adaptor with coiled-coil, transcript variant X2; WW domain containing adaptor with coiled-coil, transcript variant X3; WW domain containing adaptor with coiled-coil, transcript variant X4; WW domain containing adaptor with coiled-coil, transcript variant X5; WW domain containing adaptor with coiled-coil, transcript variant X6; WW domain containing adaptor with coiled-coil, transcript variant X7; WW domain containing adaptor with coiled-coil, transcript variant X8; WW domain containing adaptor with coiled-coil, transcript variant X9; WW domain-containing adapter protein with coiled-coil
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093448,243,833 - 8,314,148 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366132,794,732 - 2,865,913 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366132,793,706 - 2,862,984 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Wac
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093448,243,833 - 8,314,148 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366132,794,732 - 2,865,913 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366132,793,706 - 2,862,984 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WAC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381028,532,779 - 28,623,112 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1028,532,493 - 28,623,112 (+)EnsemblGRCh38hg38GRCh38
GRCh371028,821,708 - 28,912,041 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361028,861,706 - 28,949,478 (+)NCBINCBI36Build 36hg18NCBI36
Celera1028,585,512 - 28,673,953 (+)NCBICelera
Cytogenetic Map10p12.1NCBI
HuRef1028,539,551 - 28,629,942 (+)NCBIHuRef
CHM1_11028,821,968 - 28,912,537 (+)NCBICHM1_1
T2T-CHM13v2.01028,563,354 - 28,653,650 (+)NCBIT2T-CHM13v2.0
Wac
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39187,868,614 - 7,929,028 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl187,868,832 - 7,929,028 (+)EnsemblGRCm39 Ensembl
GRCm38187,868,825 - 7,929,028 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl187,868,832 - 7,929,028 (+)EnsemblGRCm38mm10GRCm38
MGSCv37187,868,856 - 7,929,025 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36187,869,237 - 7,927,072 (+)NCBIMGSCv36mm8
Celera187,915,935 - 7,976,189 (+)NCBICelera
Cytogenetic Map18A1NCBI
cM Map184.62NCBI
Wac
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81760,617,702 - 60,677,771 (+)NCBIGRCr8
mRatBN7.21755,922,686 - 55,984,286 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1755,923,123 - 55,982,301 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1759,092,613 - 59,151,089 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01763,095,705 - 63,154,179 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01757,235,586 - 57,293,885 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01760,887,606 - 60,946,630 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1760,888,017 - 60,946,426 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01762,663,721 - 62,723,083 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41764,530,450 - 64,604,845 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1757,238,053 - 57,291,859 (+)NCBICelera
Cytogenetic Map17q12.1NCBI
Wac
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554622,358,842 - 2,435,628 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554622,358,842 - 2,435,644 (+)NCBIChiLan1.0ChiLan1.0
WAC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2841,205,841 - 41,297,561 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11041,211,167 - 41,302,888 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01028,685,294 - 28,777,176 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11029,042,331 - 29,130,597 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1029,042,331 - 29,130,591 (+)Ensemblpanpan1.1panPan2
WAC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1217,504,949 - 17,588,037 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha215,004,769 - 15,088,966 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0215,753,171 - 15,837,460 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1215,191,803 - 15,274,633 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0215,079,183 - 15,162,408 (-)NCBIUNSW_CanFamBas_1.0
WAC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1039,932,599 - 40,022,338 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11039,932,562 - 40,024,114 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21044,120,334 - 44,210,098 (+)NCBISscrofa10.2Sscrofa10.2susScr3
WAC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1928,131,774 - 28,222,501 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl928,131,769 - 28,219,134 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605134,167,952 - 34,256,751 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wac
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248056,813,100 - 6,898,686 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000013841   ⟹   ENSSTOP00000012402
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366132,794,732 - 2,865,913 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000041482   ⟹   ENSSTOP00000030648
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366132,794,732 - 2,865,913 (+)Ensembl
RefSeq Acc Id: XM_005334284   ⟹   XP_005334341
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244093448,244,185 - 8,314,148 (+)NCBI
SpeTri2.0NW_0049366132,794,846 - 2,862,984 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005334285   ⟹   XP_005334342
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244093448,243,833 - 8,314,146 (+)NCBI
SpeTri2.0NW_0049366132,793,706 - 2,862,984 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005334286   ⟹   XP_005334343
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244093448,244,185 - 8,314,148 (+)NCBI
SpeTri2.0NW_0049366132,794,846 - 2,862,984 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013362402   ⟹   XP_013217856
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244093448,244,535 - 8,314,146 (+)NCBI
SpeTri2.0NW_0049366132,794,847 - 2,862,984 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021732442   ⟹   XP_021588117
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244093448,243,941 - 8,314,146 (+)NCBI
SpeTri2.0NW_0049366132,794,383 - 2,862,984 (+)NCBI
Sequence:
RefSeq Acc Id: XP_005334342   ⟸   XM_005334285
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005334341   ⟸   XM_005334284
- Peptide Label: isoform X1
- UniProtKB: I3MLT0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005334343   ⟸   XM_005334286
- Peptide Label: isoform X3
- UniProtKB: A0A287DAS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013217856   ⟸   XM_013362402
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_021588117   ⟸   XM_021732442
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSSTOP00000030648   ⟸   ENSSTOT00000041482
RefSeq Acc Id: ENSSTOP00000012402   ⟸   ENSSTOT00000013841
Protein Domains
WW


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000013836 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000013841.3 UniProtKB/TrEMBL
  ENSSTOT00000041482.1 UniProtKB/TrEMBL
Gene3D-CATH 2.20.70.10 UniProtKB/TrEMBL
InterPro WAC UniProtKB/TrEMBL
  WW_dom UniProtKB/TrEMBL
  WW_dom_sf UniProtKB/TrEMBL
NCBI Gene Wac ENTREZGENE
PANTHER PTHR15911 UniProtKB/TrEMBL
  WW DOMAIN-CONTAINING ADAPTER PROTEIN WITH COILED-COIL UniProtKB/TrEMBL
Pfam PF00397 UniProtKB/TrEMBL
PROSITE WW_DOMAIN_1 UniProtKB/TrEMBL
  WW_DOMAIN_2 UniProtKB/TrEMBL
SMART SM00456 UniProtKB/TrEMBL
Superfamily-SCOP SSF51045 UniProtKB/TrEMBL
UniProt A0A287DAS8 ENTREZGENE, UniProtKB/TrEMBL
  I3MLT0 ENTREZGENE, UniProtKB/TrEMBL