Slc34a1 (solute carrier family 34 member 1) - Rat Genome Database

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Gene: Slc34a1 (solute carrier family 34 member 1) Ictidomys tridecemlineatus
Analyze
Symbol: Slc34a1
Name: solute carrier family 34 member 1
RGD ID: 12653575
Description: ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN arsenate ion transmembrane transport (ortholog); bone remodeling (ortholog); cellular response to metal ion (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Acidoses (ortholog); Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: sodium-dependent phosphate transport protein 2A
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213122,642,609 - 122,659,626 (+)NCBI
SpeTri2.0NW_0049365971,667,700 - 1,684,533 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Slc34a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213122,642,609 - 122,659,626 (+)NCBI
SpeTri2.0NW_0049365971,667,700 - 1,684,533 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC34A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5177,379,235 - 177,398,848 (+)EnsemblGRCh38hg38GRCh38
GRCh385177,384,434 - 177,412,021 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh375176,811,435 - 176,825,849 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365176,744,041 - 176,758,455 (+)NCBINCBI36hg18NCBI36
Build 345176,744,060 - 176,758,454NCBI
Celera5171,675,605 - 171,689,835 (-)NCBI
Cytogenetic Map5q35.3NCBI
HuRef5171,732,061 - 171,746,276 (+)NCBIHuRef
CHM1_15176,244,481 - 176,258,897 (+)NCBICHM1_1
Slc34a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391355,547,435 - 55,562,508 (+)NCBIGRCm39mm39
GRCm39 Ensembl1355,546,000 - 55,563,405 (+)Ensembl
GRCm381355,399,622 - 55,414,695 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1355,398,187 - 55,415,592 (+)EnsemblGRCm38mm10GRCm38
MGSCv371355,501,009 - 55,516,056 (+)NCBIGRCm37mm9NCBIm37
MGSCv361355,409,326 - 55,423,713 (+)NCBImm8
Celera1356,453,307 - 56,468,818 (+)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1329.81NCBI
Slc34a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2179,218,876 - 9,233,852 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl179,218,876 - 9,233,852 (-)Ensembl
Rnor_6.0179,747,766 - 9,762,739 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl179,747,752 - 9,762,813 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01711,856,946 - 11,872,100 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41715,262,929 - 15,277,902 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11715,262,928 - 15,277,902 (-)NCBI
Celera179,297,383 - 9,312,355 (-)NCBICelera
RH 3.4 Map1781.4RGD
Cytogenetic Map17p14NCBI
Slc34a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540829,626,775 - 29,640,875 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540829,626,775 - 29,640,811 (+)NCBIChiLan1.0ChiLan1.0
SLC34A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15179,748,492 - 179,762,804 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5179,748,492 - 179,762,975 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05172,685,862 - 172,700,440 (+)NCBIMhudiblu_PPA_v0panPan3
SLC34A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1435,961,394 - 35,973,733 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl435,961,958 - 35,973,657 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha435,928,819 - 35,941,165 (-)NCBI
ROS_Cfam_1.0436,327,621 - 36,339,965 (-)NCBI
UMICH_Zoey_3.1436,152,845 - 36,165,191 (-)NCBI
UNSW_CanFamBas_1.0436,339,065 - 36,351,380 (-)NCBI
UU_Cfam_GSD_1.0436,848,297 - 36,860,641 (-)NCBI
SLC34A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl280,548,232 - 80,563,321 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1280,548,208 - 80,563,380 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SLC34A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12379,395,923 - 79,410,835 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2379,396,250 - 79,411,695 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607510,585,375 - 10,600,418 (+)NCBIVero_WHO_p1.0
Slc34a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473312,685,544 - 12,699,908 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021731590   ⟹   XP_021587265
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213122,642,609 - 122,658,993 (+)NCBI
SpeTri2.0NW_0049365971,667,700 - 1,684,533 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040273183   ⟹   XP_040129117
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213122,645,247 - 122,658,993 (+)NCBI
RefSeq Acc Id: XM_040273184   ⟹   XP_040129118
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213122,646,709 - 122,659,626 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021587265 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129117 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129118 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3265765 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_021587265   ⟸   XM_021731590
- Sequence:
RefSeq Acc Id: XP_040129117   ⟸   XM_040273183
RefSeq Acc Id: XP_040129118   ⟸   XM_040273184


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000008376 ENTREZGENE
Ensembl Protein ENSSTOP00000007510 ENTREZGENE
NCBI Gene Slc34a1 ENTREZGENE