LOC101969288 (olfactory receptor 1509) - Rat Genome Database

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Pathways
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Gene: LOC101969288 (olfactory receptor 1509) Ictidomys tridecemlineatus
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Symbol: LOC101969288 (Ensembl: OR4E2)
Name: olfactory receptor 1509 (Ensembl:olfactory receptor 4E2)
RGD ID: 12652850
Description: ENCODES a protein that exhibits copper ion binding (inferred); G protein-coupled receptor activity (inferred); odorant binding (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception (inferred); detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: olfactory receptor 4E2
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244072252,211 - 3,137 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936976415,720 - 416,646 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049422892,210 - 3,137 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013366541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010002285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_013366541   ⟹   XP_013221995
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244072252,211 - 3,137 (-)NCBI
SpeTri2.0NW_0049422892,210 - 3,137 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013221995 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000018045.2
GenBank Protein KAG3263794 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_013221995   ⟸   XM_013366541
- UniProtKB: I3N0Z9 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000026626 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000028029.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC101969288 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 4Q2 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt I3N0Z9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 LOC101969288  olfactory receptor 1509  LOC101969288  olfactory receptor 4E2  Symbol and/or name change 5135510 APPROVED