Ggh (gamma-glutamyl hydrolase) - Rat Genome Database

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Gene: Ggh (gamma-glutamyl hydrolase) Ictidomys tridecemlineatus
Analyze
Symbol: Ggh
Name: gamma-glutamyl hydrolase
RGD ID: 12652354
Description: ENCODES a protein that exhibits gamma-glutamyl-peptidase activity (ortholog); INVOLVED IN response to ethanol (ortholog); response to insulin (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530364,282,077 - 64,299,958 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649610,485,504 - 10,505,842 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649610,485,528 - 10,505,506 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Ggh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530364,282,077 - 64,299,958 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649610,485,504 - 10,505,842 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649610,485,528 - 10,505,506 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GGH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38863,015,079 - 63,038,806 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl863,014,881 - 63,039,407 (-)EnsemblGRCh38hg38GRCh38
GRCh37863,927,638 - 63,951,365 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36864,090,192 - 64,113,940 (-)NCBINCBI36Build 36hg18NCBI36
Build 34864,090,194 - 64,113,940NCBI
Celera859,917,838 - 59,941,813 (-)NCBICelera
Cytogenetic Map8q12.3NCBI
HuRef859,415,504 - 59,439,479 (-)NCBIHuRef
CHM1_1863,980,633 - 64,004,623 (-)NCBICHM1_1
T2T-CHM13v2.0863,439,652 - 63,463,378 (-)NCBIT2T-CHM13v2.0
Ggh
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39420,041,963 - 20,066,111 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl420,042,052 - 20,066,750 (+)EnsemblGRCm39 Ensembl
GRCm38420,041,997 - 20,066,111 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl420,042,052 - 20,066,750 (+)EnsemblGRCm38mm10GRCm38
MGSCv37419,969,199 - 19,993,258 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36420,164,971 - 20,188,858 (+)NCBIMGSCv36mm8
Celera419,800,007 - 19,824,562 (+)NCBICelera
Cytogenetic Map4A3NCBI
cM Map47.79NCBI
Ggh
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8538,326,747 - 38,349,655 (+)NCBIGRCr8
mRatBN7.2533,529,880 - 33,552,790 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl533,529,880 - 33,552,787 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx535,643,220 - 35,666,193 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0537,235,432 - 37,258,403 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0537,174,941 - 37,197,912 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0534,040,258 - 34,063,369 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl534,040,258 - 34,063,361 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0538,693,591 - 38,716,702 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4534,670,883 - 34,693,791 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1534,671,061 - 34,693,969 (+)NCBI
Celera532,605,342 - 32,628,233 (+)NCBICelera
Cytogenetic Map5q13NCBI
Ggh
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544415,900,485 - 15,931,338 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544415,901,225 - 15,930,358 (+)NCBIChiLan1.0ChiLan1.0
GGH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2778,741,363 - 78,769,505 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1854,380,324 - 54,408,566 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0859,547,821 - 59,571,523 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1861,222,194 - 61,246,096 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl861,222,194 - 61,246,252 (-)Ensemblpanpan1.1panPan2
GGH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12913,143,881 - 13,165,028 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2913,134,232 - 13,165,028 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2913,471,573 - 13,492,163 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02913,246,558 - 13,267,739 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2913,245,957 - 13,267,728 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12913,258,091 - 13,279,415 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02913,375,202 - 13,396,822 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02913,641,119 - 13,662,465 (-)NCBIUU_Cfam_GSD_1.0
GGH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl470,996,755 - 71,021,838 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1470,996,730 - 71,020,513 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2477,279,213 - 77,303,313 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GGH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1858,908,524 - 58,932,885 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl858,908,417 - 58,932,685 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603982,649,447 - 82,674,608 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ggh
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474428,752,909 - 28,785,661 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474428,752,785 - 28,786,293 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000013288   ⟹   ENSSTOP00000011910
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649610,485,504 - 10,505,842 (+)Ensembl
RefSeq Acc Id: XM_005322970   ⟹   XP_005323027
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530364,282,077 - 64,299,958 (-)NCBI
SpeTri2.0NW_00493649610,485,528 - 10,505,506 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724913   ⟹   XP_021580588
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530364,282,077 - 64,299,887 (-)NCBI
SpeTri2.0NW_00493649610,485,665 - 10,505,506 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005323027 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580588 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000011910.2
RefSeq Acc Id: XP_005323027   ⟸   XM_005322970
- Peptide Label: isoform X1
- UniProtKB: I3MKQ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580588   ⟸   XM_021724913
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSSTOP00000011910   ⟸   ENSSTOT00000013288


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000013290 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000013288.3 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.880 UniProtKB/TrEMBL
InterPro Class_I_gatase-like UniProtKB/TrEMBL
  Pept_C26_g-glut_hydrolase UniProtKB/TrEMBL
  Peptidase_C26 UniProtKB/TrEMBL
NCBI Gene Ggh ENTREZGENE
PANTHER GAMMA-GLUTAMYL HYDROLASE UniProtKB/TrEMBL
  PTHR11315 UniProtKB/TrEMBL
Pfam Peptidase_C26 UniProtKB/TrEMBL
PROSITE GATASE_TYPE_1 UniProtKB/TrEMBL
  PEPTIDASE_C26_GGH UniProtKB/TrEMBL
Superfamily-SCOP SSF52317 UniProtKB/TrEMBL
UniProt I3MKQ3 ENTREZGENE, UniProtKB/TrEMBL